Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Nkx3-1P97436 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
Nkx3-1P97436 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Nkx3-1P97436 Gm43508-201ENSMUST00000197251 3783 ntBASIC3.34□□□□□ -1.87
Nkx3-1P97436 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Nkx3-1P97436 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
Nkx3-1P97436 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
Nkx3-1P97436 Gm24982-201ENSMUST00000104456 132 ntBASIC3.34□□□□□ -1.87
Nkx3-1P97436 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Nkx3-1P97436 Klra7-204ENSMUST00000112013 1104 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
Nkx3-1P97436 Mup-ps20-201ENSMUST00000121132 389 ntBASIC3.34□□□□□ -1.87
Nkx3-1P97436 Gm25105-201ENSMUST00000122477 130 ntBASIC3.34□□□□□ -1.87
Nkx3-1P97436 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC3.34□□□□□ -1.87
Nkx3-1P97436 Gm23865-201ENSMUST00000157723 97 ntBASIC3.34□□□□□ -1.87
Nkx3-1P97436 Gm24314-201ENSMUST00000158274 123 ntBASIC3.34□□□□□ -1.87
Nkx3-1P97436 Gm23198-201ENSMUST00000158811 91 ntBASIC3.34□□□□□ -1.87
Nkx3-1P97436 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Nkx3-1P97436 Gm6625-201ENSMUST00000177870 272 ntBASIC3.34□□□□□ -1.87
Nkx3-1P97436 Gm27828-201ENSMUST00000184108 119 ntBASIC3.34□□□□□ -1.87
Nkx3-1P97436 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Nkx3-1P97436 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC3.34□□□□□ -1.87
Nkx3-1P97436 Gm44694-201ENSMUST00000205317 1298 ntBASIC3.34□□□□□ -1.87
Nkx3-1P97436 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC3.34□□□□□ -1.87
Nkx3-1P97436 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC3.34□□□□□ -1.87
Nkx3-1P97436 Gm45379-201ENSMUST00000211772 549 ntBASIC3.34□□□□□ -1.87
Nkx3-1P97436 Gm18116-201ENSMUST00000220920 537 ntBASIC3.34□□□□□ -1.87
Nkx3-1P97436 Gm12582-201ENSMUST00000030555 697 ntBASIC3.34□□□□□ -1.87
Nkx3-1P97436 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Nkx3-1P97436 Olfr1451-201ENSMUST00000063144 933 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Nkx3-1P97436 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Nkx3-1P97436 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.87
Nkx3-1P97436 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC3.34□□□□□ -1.88
Nkx3-1P97436 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Nkx3-1P97436 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Nkx3-1P97436 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Nkx3-1P97436 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Nkx3-1P97436 AC126033.1-201ENSMUST00000227628 6773 ntBASIC3.34□□□□□ -1.88
Nkx3-1P97436 Gm42728-201ENSMUST00000202644 1552 ntBASIC3.34□□□□□ -1.88
Nkx3-1P97436 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Nkx3-1P97436 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
Nkx3-1P97436 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
Nkx3-1P97436 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Nkx3-1P97436 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Nkx3-1P97436 Gm44678-201ENSMUST00000207828 2775 ntBASIC3.33□□□□□ -1.88
Nkx3-1P97436 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
Nkx3-1P97436 Gm15180-201ENSMUST00000117745 492 ntBASIC3.33□□□□□ -1.88
Nkx3-1P97436 Gm13677-201ENSMUST00000120739 595 ntBASIC3.33□□□□□ -1.88
Nkx3-1P97436 Gm13865-201ENSMUST00000120957 865 ntBASIC3.33□□□□□ -1.88
Nkx3-1P97436 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC3.33□□□□□ -1.88
Nkx3-1P97436 Gm6079-201ENSMUST00000121356 404 ntBASIC3.33□□□□□ -1.88
Nkx3-1P97436 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC3.33□□□□□ -1.88
Nkx3-1P97436 Gm13335-201ENSMUST00000129994 471 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Nkx3-1P97436 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC3.33□□□□□ -1.88
Nkx3-1P97436 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Nkx3-1P97436 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC3.33□□□□□ -1.88
Nkx3-1P97436 Gm14102-201ENSMUST00000147678 464 ntTSL 2 BASIC3.33□□□□□ -1.88
Nkx3-1P97436 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Nkx3-1P97436 Gm25977-201ENSMUST00000158697 85 ntBASIC3.33□□□□□ -1.88
Nkx3-1P97436 Gm21991-201ENSMUST00000180006 508 ntBASIC3.33□□□□□ -1.88
Nkx3-1P97436 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC3.33□□□□□ -1.88
Nkx3-1P97436 Gm19637-201ENSMUST00000185933 579 ntBASIC3.33□□□□□ -1.88
Nkx3-1P97436 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC3.33□□□□□ -1.88
Nkx3-1P97436 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Nkx3-1P97436 Gm38080-201ENSMUST00000194035 268 ntBASIC3.33□□□□□ -1.88
Nkx3-1P97436 Gm37617-201ENSMUST00000194309 159 ntBASIC3.33□□□□□ -1.88
Nkx3-1P97436 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC3.33□□□□□ -1.88
Nkx3-1P97436 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC3.33□□□□□ -1.88
Nkx3-1P97436 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC3.33□□□□□ -1.88
Nkx3-1P97436 Mir7682-201ENSMUST00000198467 58 ntBASIC3.33□□□□□ -1.88
Nkx3-1P97436 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC3.33□□□□□ -1.88
Nkx3-1P97436 Gm44371-201ENSMUST00000204148 467 ntBASIC3.33□□□□□ -1.88
Nkx3-1P97436 Gm45245-201ENSMUST00000210082 376 ntBASIC3.33□□□□□ -1.88
Nkx3-1P97436 AC129323.1-201ENSMUST00000216733 470 ntBASIC3.33□□□□□ -1.88
Nkx3-1P97436 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Nkx3-1P97436 Gm24147-201ENSMUST00000082763 144 ntBASIC3.33□□□□□ -1.88
Nkx3-1P97436 Mir30e-201ENSMUST00000083475 92 ntBASIC3.33□□□□□ -1.88
Nkx3-1P97436 Serpinb6c-201ENSMUST00000110273 1325 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Nkx3-1P97436 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Nkx3-1P97436 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
Nkx3-1P97436 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
Nkx3-1P97436 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Nkx3-1P97436 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Nkx3-1P97436 Gm38065-201ENSMUST00000193147 3492 ntBASIC3.32□□□□□ -1.88
Nkx3-1P97436 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
Nkx3-1P97436 Gm43319-201ENSMUST00000198036 2270 ntBASIC3.32□□□□□ -1.88
Nkx3-1P97436 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Nkx3-1P97436 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Nkx3-1P97436 Gm24987-201ENSMUST00000104453 134 ntBASIC3.32□□□□□ -1.88
Nkx3-1P97436 Gm15933-201ENSMUST00000117215 616 ntBASIC3.32□□□□□ -1.88
Nkx3-1P97436 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC3.32□□□□□ -1.88
Nkx3-1P97436 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC3.32□□□□□ -1.88
Nkx3-1P97436 Gm11600-201ENSMUST00000119592 240 ntBASIC3.32□□□□□ -1.88
Nkx3-1P97436 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC3.32□□□□□ -1.88
Nkx3-1P97436 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Nkx3-1P97436 Gm23082-201ENSMUST00000157852 133 ntBASIC3.32□□□□□ -1.88
Nkx3-1P97436 Gm21960-201ENSMUST00000181924 452 ntBASIC3.32□□□□□ -1.88
Nkx3-1P97436 Gm28186-201ENSMUST00000187447 679 ntBASIC3.32□□□□□ -1.88
Nkx3-1P97436 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC3.32□□□□□ -1.88
Nkx3-1P97436 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Nkx3-1P97436 Gm37111-201ENSMUST00000193250 634 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 118.3 ms