Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Sdc1P18828 Gm15773-201ENSMUST00000118665 1448 ntBASIC3.3□□□□□ -1.88
Sdc1P18828 Igip-201ENSMUST00000210490 1417 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Sdc1P18828 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Sdc1P18828 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Sdc1P18828 Gm25097-201ENSMUST00000104042 145 ntBASIC3.3□□□□□ -1.88
Sdc1P18828 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
Sdc1P18828 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
Sdc1P18828 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Sdc1P18828 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC3.3□□□□□ -1.88
Sdc1P18828 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC3.3□□□□□ -1.88
Sdc1P18828 Gm1866-201ENSMUST00000120701 477 ntBASIC3.3□□□□□ -1.88
Sdc1P18828 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
Sdc1P18828 Gm22036-201ENSMUST00000157279 215 ntBASIC3.3□□□□□ -1.88
Sdc1P18828 Gm23824-201ENSMUST00000158741 276 ntBASIC3.3□□□□□ -1.88
Sdc1P18828 Gm23700-201ENSMUST00000158842 102 ntBASIC3.3□□□□□ -1.88
Sdc1P18828 Gm25363-201ENSMUST00000158850 245 ntBASIC3.3□□□□□ -1.88
Sdc1P18828 Gm3191-201ENSMUST00000167139 346 ntBASIC3.3□□□□□ -1.88
Sdc1P18828 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC3.3□□□□□ -1.88
Sdc1P18828 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC3.3□□□□□ -1.88
Sdc1P18828 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC3.3□□□□□ -1.88
Sdc1P18828 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC3.3□□□□□ -1.88
Sdc1P18828 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
Sdc1P18828 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
Sdc1P18828 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Sdc1P18828 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Sdc1P18828 Mir7022-201ENSMUST00000183749 61 ntBASIC3.3□□□□□ -1.88
Sdc1P18828 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC3.3□□□□□ -1.88
Sdc1P18828 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC3.3□□□□□ -1.88
Sdc1P18828 Gm37300-201ENSMUST00000193327 280 ntBASIC3.3□□□□□ -1.88
Sdc1P18828 Gm38356-201ENSMUST00000194313 408 ntBASIC3.3□□□□□ -1.88
Sdc1P18828 Ighv1-44-201ENSMUST00000195597 352 ntBASIC3.3□□□□□ -1.88
Sdc1P18828 Gm43649-201ENSMUST00000196596 391 ntBASIC3.3□□□□□ -1.88
Sdc1P18828 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC3.3□□□□□ -1.88
Sdc1P18828 Gm44583-201ENSMUST00000207478 281 ntBASIC3.3□□□□□ -1.88
Sdc1P18828 Gm44857-201ENSMUST00000208331 196 ntBASIC3.3□□□□□ -1.88
Sdc1P18828 Gm17737-201ENSMUST00000210183 1147 ntBASIC3.3□□□□□ -1.88
Sdc1P18828 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC3.3□□□□□ -1.88
Sdc1P18828 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC3.3□□□□□ -1.88
Sdc1P18828 Gm3800-201ENSMUST00000221086 554 ntBASIC3.3□□□□□ -1.88
Sdc1P18828 Gm46998-201ENSMUST00000221444 330 ntBASIC3.3□□□□□ -1.88
Sdc1P18828 AC239878.1-201ENSMUST00000224212 506 ntBASIC3.3□□□□□ -1.88
Sdc1P18828 AC174459.2-201ENSMUST00000226036 160 ntBASIC3.3□□□□□ -1.88
Sdc1P18828 AC132237.1-201ENSMUST00000220950 4475 ntBASIC3.3□□□□□ -1.88
Sdc1P18828 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Sdc1P18828 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Sdc1P18828 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC3.3□□□□□ -1.88
Sdc1P18828 Gm45809-201ENSMUST00000211661 3894 ntBASIC3.3□□□□□ -1.88
Sdc1P18828 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Sdc1P18828 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Sdc1P18828 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Sdc1P18828 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Sdc1P18828 Gm43259-201ENSMUST00000198446 3277 ntBASIC3.29□□□□□ -1.88
Sdc1P18828 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
Sdc1P18828 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
Sdc1P18828 Gm5248-201ENSMUST00000186108 4046 ntBASIC3.29□□□□□ -1.88
Sdc1P18828 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Sdc1P18828 Gm8734-201ENSMUST00000211669 1312 ntBASIC3.29□□□□□ -1.88
Sdc1P18828 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC3.29□□□□□ -1.88
Sdc1P18828 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Sdc1P18828 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Sdc1P18828 Gm25758-201ENSMUST00000103987 129 ntBASIC3.29□□□□□ -1.88
Sdc1P18828 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Sdc1P18828 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC3.29□□□□□ -1.88
Sdc1P18828 Gm8666-201ENSMUST00000117517 292 ntBASIC3.29□□□□□ -1.88
Sdc1P18828 Gm14142-201ENSMUST00000117833 296 ntBASIC3.29□□□□□ -1.88
Sdc1P18828 Gm13550-201ENSMUST00000118185 525 ntBASIC3.29□□□□□ -1.88
Sdc1P18828 Gm7189-201ENSMUST00000119811 429 ntBASIC3.29□□□□□ -1.88
Sdc1P18828 Gm12587-201ENSMUST00000120180 427 ntBASIC3.29□□□□□ -1.88
Sdc1P18828 Gm15194-201ENSMUST00000120453 434 ntBASIC3.29□□□□□ -1.88
Sdc1P18828 Gm16100-201ENSMUST00000120489 231 ntBASIC3.29□□□□□ -1.88
Sdc1P18828 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC3.29□□□□□ -1.88
Sdc1P18828 Gm11260-201ENSMUST00000121163 942 ntBASIC3.29□□□□□ -1.88
Sdc1P18828 Gm11797-201ENSMUST00000121336 754 ntBASIC3.29□□□□□ -1.88
Sdc1P18828 Gm14800-201ENSMUST00000122084 1272 ntBASIC3.29□□□□□ -1.88
Sdc1P18828 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Sdc1P18828 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC3.29□□□□□ -1.88
Sdc1P18828 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC3.29□□□□□ -1.88
Sdc1P18828 Gm23225-201ENSMUST00000158121 114 ntBASIC3.29□□□□□ -1.88
Sdc1P18828 Gm24666-201ENSMUST00000158937 167 ntBASIC3.29□□□□□ -1.88
Sdc1P18828 Gm15974-201ENSMUST00000159103 531 ntBASIC3.29□□□□□ -1.88
Sdc1P18828 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC3.29□□□□□ -1.88
Sdc1P18828 Has2os-203ENSMUST00000165880 638 ntTSL 2 BASIC3.29□□□□□ -1.88
Sdc1P18828 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Sdc1P18828 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Sdc1P18828 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC3.29□□□□□ -1.88
Sdc1P18828 Gm23450-201ENSMUST00000178285 91 ntBASIC3.29□□□□□ -1.88
Sdc1P18828 Gm20773-201ENSMUST00000178940 681 ntBASIC3.29□□□□□ -1.88
Sdc1P18828 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Sdc1P18828 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC3.29□□□□□ -1.88
Sdc1P18828 Gm27255-201ENSMUST00000184303 529 ntTSL 3 BASIC3.29□□□□□ -1.88
Sdc1P18828 Gm29570-201ENSMUST00000185813 681 ntTSL 3 BASIC3.29□□□□□ -1.88
Sdc1P18828 Gm8600-201ENSMUST00000186320 905 ntBASIC3.29□□□□□ -1.88
Sdc1P18828 Gm28709-201ENSMUST00000186967 456 ntTSL 5 BASIC3.29□□□□□ -1.88
Sdc1P18828 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC3.29□□□□□ -1.88
Sdc1P18828 Gm5511-201ENSMUST00000189380 802 ntBASIC3.29□□□□□ -1.88
Sdc1P18828 Gm28788-201ENSMUST00000189717 375 ntBASIC3.29□□□□□ -1.88
Sdc1P18828 Gm29036-201ENSMUST00000189967 877 ntBASIC3.29□□□□□ -1.88
Sdc1P18828 Gm29558-201ENSMUST00000190134 375 ntBASIC3.29□□□□□ -1.88
Sdc1P18828 Gm29011-201ENSMUST00000191059 712 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 113.5 ms