Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm12281-201ENSMUST00000119536 298 ntBASIC5.93□□□□□ -1.46
RaraP11416 Gm5060-201ENSMUST00000120072 599 ntBASIC5.93□□□□□ -1.46
RaraP11416 Gm2005-201ENSMUST00000120759 542 ntBASIC5.93□□□□□ -1.46
RaraP11416 Gm14761-201ENSMUST00000121363 262 ntBASIC5.93□□□□□ -1.46
RaraP11416 Gm8761-201ENSMUST00000121507 955 ntBASIC5.93□□□□□ -1.46
RaraP11416 Gm14237-201ENSMUST00000122080 430 ntBASIC5.93□□□□□ -1.46
RaraP11416 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC5.93□□□□□ -1.46
RaraP11416 Gm9428-201ENSMUST00000127214 769 ntBASIC5.93□□□□□ -1.46
RaraP11416 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC5.93□□□□□ -1.46
RaraP11416 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC5.93□□□□□ -1.46
RaraP11416 Gm23016-201ENSMUST00000158431 62 ntBASIC5.93□□□□□ -1.46
RaraP11416 Gm16125-201ENSMUST00000159003 339 ntBASIC5.93□□□□□ -1.46
RaraP11416 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC5.93□□□□□ -1.46
RaraP11416 Gm18953-201ENSMUST00000175694 300 ntBASIC5.93□□□□□ -1.46
RaraP11416 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RaraP11416 Gm23450-201ENSMUST00000178285 91 ntBASIC5.93□□□□□ -1.46
RaraP11416 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RaraP11416 Gm14527-201ENSMUST00000179300 639 ntBASIC5.93□□□□□ -1.46
RaraP11416 Gm24957-201ENSMUST00000179604 132 ntBASIC5.93□□□□□ -1.46
RaraP11416 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC5.93□□□□□ -1.46
RaraP11416 Gm37961-201ENSMUST00000192729 299 ntBASIC5.93□□□□□ -1.46
RaraP11416 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RaraP11416 Gm43175-201ENSMUST00000198450 3810 ntBASIC5.93□□□□□ -1.46
RaraP11416 AC134420.1-201ENSMUST00000227027 289 ntBASIC5.93□□□□□ -1.46
RaraP11416 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
RaraP11416 Olfr467-201ENSMUST00000084756 927 ntBASIC5.93□□□□□ -1.46
RaraP11416 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
RaraP11416 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RaraP11416 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC5.93□□□□□ -1.46
RaraP11416 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC5.93□□□□□ -1.46
RaraP11416 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RaraP11416 Gm44567-201ENSMUST00000205645 2631 ntBASIC5.93□□□□□ -1.46
RaraP11416 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RaraP11416 Gm19113-201ENSMUST00000217552 1828 ntBASIC5.92□□□□□ -1.46
RaraP11416 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RaraP11416 AC124586.1-201ENSMUST00000221673 2795 ntBASIC5.92□□□□□ -1.46
RaraP11416 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
RaraP11416 Gm29084-201ENSMUST00000185587 1452 ntBASIC5.92□□□□□ -1.46
RaraP11416 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
RaraP11416 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RaraP11416 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RaraP11416 Gm22834-201ENSMUST00000102021 79 ntBASIC5.92□□□□□ -1.46
RaraP11416 Gm11409-201ENSMUST00000118621 403 ntBASIC5.92□□□□□ -1.46
RaraP11416 Gm14874-201ENSMUST00000118995 438 ntBASIC5.92□□□□□ -1.46
RaraP11416 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RaraP11416 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC5.92□□□□□ -1.46
RaraP11416 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC5.92□□□□□ -1.46
RaraP11416 Gm22597-201ENSMUST00000157602 80 ntBASIC5.92□□□□□ -1.46
RaraP11416 Gm24729-201ENSMUST00000158225 137 ntBASIC5.92□□□□□ -1.46
RaraP11416 Gm16566-201ENSMUST00000160387 910 ntBASIC5.92□□□□□ -1.46
RaraP11416 Gm20415-201ENSMUST00000172877 423 ntBASIC5.92□□□□□ -1.46
RaraP11416 Gm22716-201ENSMUST00000177596 107 ntBASIC5.92□□□□□ -1.46
RaraP11416 Gm25194-201ENSMUST00000177987 79 ntBASIC5.92□□□□□ -1.46
RaraP11416 Gm8649-201ENSMUST00000181799 233 ntBASIC5.92□□□□□ -1.46
RaraP11416 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC5.92□□□□□ -1.46
RaraP11416 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC5.92□□□□□ -1.46
RaraP11416 Gm37492-201ENSMUST00000191948 376 ntBASIC5.92□□□□□ -1.46
RaraP11416 Gm36891-201ENSMUST00000191995 655 ntBASIC5.92□□□□□ -1.46
RaraP11416 2610509F24Rik-201ENSMUST00000193035 838 ntBASIC5.92□□□□□ -1.46
RaraP11416 Ighv1-14-201ENSMUST00000194015 402 ntBASIC5.92□□□□□ -1.46
RaraP11416 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC5.92□□□□□ -1.46
RaraP11416 Gm38167-201ENSMUST00000195704 1178 ntBASIC5.92□□□□□ -1.46
RaraP11416 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC5.92□□□□□ -1.46
RaraP11416 Gm22897-201ENSMUST00000197860 128 ntBASIC5.92□□□□□ -1.46
RaraP11416 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RaraP11416 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC5.92□□□□□ -1.46
RaraP11416 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC5.92□□□□□ -1.46
RaraP11416 Gm45146-201ENSMUST00000207108 221 ntBASIC5.92□□□□□ -1.46
RaraP11416 AC121788.1-201ENSMUST00000218514 1046 ntTSL 5 BASIC5.92□□□□□ -1.46
RaraP11416 Gm8785-201ENSMUST00000220259 487 ntBASIC5.92□□□□□ -1.46
RaraP11416 AC134917.2-201ENSMUST00000223354 124 ntBASIC5.92□□□□□ -1.46
RaraP11416 AL589742.1-201ENSMUST00000226034 349 ntBASIC5.92□□□□□ -1.46
RaraP11416 AC124408.2-201ENSMUST00000228168 645 ntBASIC5.92□□□□□ -1.46
RaraP11416 Olfr1023-201ENSMUST00000056408 936 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
RaraP11416 Gm22807-201ENSMUST00000082737 129 ntBASIC5.92□□□□□ -1.46
RaraP11416 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RaraP11416 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RaraP11416 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RaraP11416 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
RaraP11416 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
RaraP11416 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RaraP11416 Gm37686-201ENSMUST00000194099 2309 ntBASIC5.92□□□□□ -1.46
RaraP11416 Gm44530-201ENSMUST00000207920 3559 ntBASIC5.92□□□□□ -1.46
RaraP11416 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
RaraP11416 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RaraP11416 AC122769.3-201ENSMUST00000227739 3245 ntBASIC5.91□□□□□ -1.46
RaraP11416 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
RaraP11416 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
RaraP11416 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RaraP11416 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
RaraP11416 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
RaraP11416 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC5.91□□□□□ -1.46
RaraP11416 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RaraP11416 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RaraP11416 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RaraP11416 Gm16431-201ENSMUST00000117454 431 ntBASIC5.91□□□□□ -1.46
RaraP11416 Gm14771-201ENSMUST00000118249 203 ntBASIC5.91□□□□□ -1.46
RaraP11416 Gm8545-201ENSMUST00000120692 801 ntBASIC5.91□□□□□ -1.46
RaraP11416 Gm12833-201ENSMUST00000136112 477 ntBASIC5.91□□□□□ -1.46
RaraP11416 Gm23538-201ENSMUST00000157535 101 ntBASIC5.91□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 89.2 ms