Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 AC107453.2-201ENSMUST00000227714 655 ntBASIC4.26□□□□□ -1.73
Col1a1P11087 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Col1a1P11087 Snord35b-201ENSMUST00000082833 87 ntBASIC4.26□□□□□ -1.73
Col1a1P11087 Olfr124-202ENSMUST00000215168 4497 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Col1a1P11087 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
Col1a1P11087 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
Col1a1P11087 Gm18359-201ENSMUST00000173024 1459 ntBASIC4.26□□□□□ -1.73
Col1a1P11087 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Col1a1P11087 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Col1a1P11087 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Col1a1P11087 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Col1a1P11087 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Col1a1P11087 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Col1a1P11087 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Col1a1P11087 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Col1a1P11087 Gm26020-201ENSMUST00000122729 183 ntBASIC4.25□□□□□ -1.73
Col1a1P11087 Gm22890-201ENSMUST00000158642 144 ntBASIC4.25□□□□□ -1.73
Col1a1P11087 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC4.25□□□□□ -1.73
Col1a1P11087 Mir3070b-201ENSMUST00000175205 89 ntBASIC4.25□□□□□ -1.73
Col1a1P11087 Mir6914-201ENSMUST00000184999 69 ntBASIC4.25□□□□□ -1.73
Col1a1P11087 Gm18597-201ENSMUST00000209519 694 ntBASIC4.25□□□□□ -1.73
Col1a1P11087 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
Col1a1P11087 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC4.25□□□□□ -1.73
Col1a1P11087 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Col1a1P11087 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Col1a1P11087 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
Col1a1P11087 Gm42770-201ENSMUST00000199657 4155 ntBASIC4.25□□□□□ -1.73
Col1a1P11087 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
Col1a1P11087 Gm42481-201ENSMUST00000196822 2178 ntBASIC4.25□□□□□ -1.73
Col1a1P11087 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Col1a1P11087 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Col1a1P11087 Gm25308-201ENSMUST00000104171 158 ntBASIC4.24□□□□□ -1.73
Col1a1P11087 Gm22023-201ENSMUST00000104354 130 ntBASIC4.24□□□□□ -1.73
Col1a1P11087 Gm23322-201ENSMUST00000104464 167 ntBASIC4.24□□□□□ -1.73
Col1a1P11087 Gm11761-201ENSMUST00000121392 445 ntBASIC4.24□□□□□ -1.73
Col1a1P11087 Gm12082-201ENSMUST00000138164 600 ntTSL 3 BASIC4.24□□□□□ -1.73
Col1a1P11087 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Col1a1P11087 Gm24059-201ENSMUST00000157493 312 ntBASIC4.24□□□□□ -1.73
Col1a1P11087 Gm24402-201ENSMUST00000157873 91 ntBASIC4.24□□□□□ -1.73
Col1a1P11087 Gm24727-201ENSMUST00000158231 144 ntBASIC4.24□□□□□ -1.73
Col1a1P11087 Gm25438-201ENSMUST00000158281 110 ntBASIC4.24□□□□□ -1.73
Col1a1P11087 Gm25490-201ENSMUST00000158734 130 ntBASIC4.24□□□□□ -1.73
Col1a1P11087 Gm18342-201ENSMUST00000186987 694 ntBASIC4.24□□□□□ -1.73
Col1a1P11087 Gm42621-201ENSMUST00000198114 275 ntBASIC4.24□□□□□ -1.73
Col1a1P11087 Gm43932-201ENSMUST00000204499 52 ntBASIC4.24□□□□□ -1.73
Col1a1P11087 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC4.24□□□□□ -1.73
Col1a1P11087 Gm45409-201ENSMUST00000211486 252 ntBASIC4.24□□□□□ -1.73
Col1a1P11087 Gm35857-201ENSMUST00000212739 178 ntBASIC4.24□□□□□ -1.73
Col1a1P11087 AC093926.1-201ENSMUST00000213730 243 ntBASIC4.24□□□□□ -1.73
Col1a1P11087 AC153544.1-201ENSMUST00000217988 400 ntBASIC4.24□□□□□ -1.73
Col1a1P11087 AC155929.1-201ENSMUST00000220217 1276 ntBASIC4.24□□□□□ -1.73
Col1a1P11087 AC080021.1-201ENSMUST00000228104 700 ntBASIC4.24□□□□□ -1.73
Col1a1P11087 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC4.24□□□□□ -1.73
Col1a1P11087 AC163296.2-201ENSMUST00000220177 1315 ntBASIC4.24□□□□□ -1.73
Col1a1P11087 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Col1a1P11087 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Col1a1P11087 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Col1a1P11087 Gm28362-201ENSMUST00000189430 2420 ntBASIC4.24□□□□□ -1.73
Col1a1P11087 Gm10811-201ENSMUST00000221985 2448 ntBASIC4.24□□□□□ -1.73
Col1a1P11087 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Col1a1P11087 Gm35755-201ENSMUST00000222392 2077 ntBASIC4.24□□□□□ -1.73
Col1a1P11087 Gm20342-201ENSMUST00000185480 9720 ntBASIC4.24□□□□□ -1.73
Col1a1P11087 AC161254.1-201ENSMUST00000220310 3842 ntBASIC4.24□□□□□ -1.73
Col1a1P11087 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Col1a1P11087 Gm36944-201ENSMUST00000192257 2759 ntBASIC4.24□□□□□ -1.73
Col1a1P11087 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
Col1a1P11087 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC4.24□□□□□ -1.73
Col1a1P11087 Gm14622-201ENSMUST00000117117 468 ntBASIC4.24□□□□□ -1.73
Col1a1P11087 Gm13650-201ENSMUST00000117729 433 ntBASIC4.24□□□□□ -1.73
Col1a1P11087 Gm14681-201ENSMUST00000118047 411 ntBASIC4.24□□□□□ -1.73
Col1a1P11087 Gm13873-201ENSMUST00000119208 427 ntBASIC4.24□□□□□ -1.73
Col1a1P11087 Mup-ps10-201ENSMUST00000119626 556 ntBASIC4.24□□□□□ -1.73
Col1a1P11087 Gm24138-201ENSMUST00000157572 114 ntBASIC4.24□□□□□ -1.73
Col1a1P11087 Gm16563-201ENSMUST00000162673 423 ntBASIC4.24□□□□□ -1.73
Col1a1P11087 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC4.24□□□□□ -1.73
Col1a1P11087 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Col1a1P11087 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC4.24□□□□□ -1.73
Col1a1P11087 Gm28069-201ENSMUST00000189926 214 ntBASIC4.24□□□□□ -1.73
Col1a1P11087 Gm19366-201ENSMUST00000206996 156 ntBASIC4.24□□□□□ -1.73
Col1a1P11087 AC150314.1-201ENSMUST00000214798 238 ntBASIC4.24□□□□□ -1.73
Col1a1P11087 AC158523.1-201ENSMUST00000221398 328 ntBASIC4.24□□□□□ -1.73
Col1a1P11087 CT010506.3-201ENSMUST00000223699 410 ntBASIC4.24□□□□□ -1.73
Col1a1P11087 AC154467.1-201ENSMUST00000227527 449 ntBASIC4.24□□□□□ -1.73
Col1a1P11087 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Col1a1P11087 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Col1a1P11087 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Col1a1P11087 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Col1a1P11087 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
Col1a1P11087 AC153948.1-201ENSMUST00000219080 3838 ntBASIC4.23□□□□□ -1.73
Col1a1P11087 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Col1a1P11087 Mir676-201ENSMUST00000102443 89 ntBASIC4.23□□□□□ -1.73
Col1a1P11087 Gm12025-201ENSMUST00000117768 144 ntBASIC4.23□□□□□ -1.73
Col1a1P11087 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
Col1a1P11087 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Col1a1P11087 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Col1a1P11087 Gm26991-201ENSMUST00000180950 620 ntBASIC4.23□□□□□ -1.73
Col1a1P11087 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC4.23□□□□□ -1.73
Col1a1P11087 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC4.23□□□□□ -1.73
Col1a1P11087 Gm43232-201ENSMUST00000201346 364 ntBASIC4.23□□□□□ -1.73
Col1a1P11087 Gm3279-201ENSMUST00000203099 1092 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 89.3 ms