Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC3.71□□□□□ -1.82
Scn8aQ9WTU3 Gm43155-201ENSMUST00000202661 494 ntBASIC3.71□□□□□ -1.82
Scn8aQ9WTU3 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC3.71□□□□□ -1.82
Scn8aQ9WTU3 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Scn8aQ9WTU3 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC3.71□□□□□ -1.82
Scn8aQ9WTU3 Tsx-201ENSMUST00000033691 812 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Scn8aQ9WTU3 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Scn8aQ9WTU3 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Scn8aQ9WTU3 Gm23736-201ENSMUST00000082553 75 ntBASIC3.71□□□□□ -1.82
Scn8aQ9WTU3 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Scn8aQ9WTU3 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Scn8aQ9WTU3 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Scn8aQ9WTU3 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Scn8aQ9WTU3 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC3.71□□□□□ -1.82
Scn8aQ9WTU3 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Scn8aQ9WTU3 AC155921.1-201ENSMUST00000216568 3841 ntBASIC3.71□□□□□ -1.82
Scn8aQ9WTU3 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Scn8aQ9WTU3 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
Scn8aQ9WTU3 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Scn8aQ9WTU3 Olfr1196-201ENSMUST00000104892 945 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Scn8aQ9WTU3 Gm12677-201ENSMUST00000118668 426 ntBASIC3.71□□□□□ -1.82
Scn8aQ9WTU3 Gm16005-201ENSMUST00000120515 269 ntBASIC3.71□□□□□ -1.82
Scn8aQ9WTU3 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC3.71□□□□□ -1.82
Scn8aQ9WTU3 2610001J05Rik-202ENSMUST00000155856 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Scn8aQ9WTU3 Gm23162-201ENSMUST00000175081 121 ntBASIC3.71□□□□□ -1.82
Scn8aQ9WTU3 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Scn8aQ9WTU3 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
Scn8aQ9WTU3 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Scn8aQ9WTU3 Gm7639-201ENSMUST00000212608 484 ntBASIC3.71□□□□□ -1.82
Scn8aQ9WTU3 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC3.71□□□□□ -1.82
Scn8aQ9WTU3 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC3.71□□□□□ -1.82
Scn8aQ9WTU3 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC3.71□□□□□ -1.82
Scn8aQ9WTU3 AC080021.1-201ENSMUST00000228104 700 ntBASIC3.71□□□□□ -1.82
Scn8aQ9WTU3 n-R5s166-201ENSMUST00000082898 121 ntBASIC3.71□□□□□ -1.82
Scn8aQ9WTU3 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC3.7□□□□□ -1.82
Scn8aQ9WTU3 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Scn8aQ9WTU3 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC3.7□□□□□ -1.82
Scn8aQ9WTU3 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Scn8aQ9WTU3 AC154548.1-201ENSMUST00000225844 3838 ntBASIC3.7□□□□□ -1.82
Scn8aQ9WTU3 Gm42455-201ENSMUST00000199761 2736 ntBASIC3.7□□□□□ -1.82
Scn8aQ9WTU3 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Scn8aQ9WTU3 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC3.7□□□□□ -1.82
Scn8aQ9WTU3 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Scn8aQ9WTU3 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC3.7□□□□□ -1.82
Scn8aQ9WTU3 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Scn8aQ9WTU3 AC130536.1-201ENSMUST00000224425 271 ntBASIC3.7□□□□□ -1.82
Scn8aQ9WTU3 AC174797.3-202ENSMUST00000224578 587 ntBASIC3.7□□□□□ -1.82
Scn8aQ9WTU3 Gm38207-201ENSMUST00000193009 3505 ntBASIC3.7□□□□□ -1.82
Scn8aQ9WTU3 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Scn8aQ9WTU3 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Scn8aQ9WTU3 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Scn8aQ9WTU3 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Scn8aQ9WTU3 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Scn8aQ9WTU3 Gm3089-201ENSMUST00000200804 1395 ntBASIC3.69□□□□□ -1.82
Scn8aQ9WTU3 Gm3302-201ENSMUST00000201462 1395 ntBASIC3.69□□□□□ -1.82
Scn8aQ9WTU3 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC3.69□□□□□ -1.82
Scn8aQ9WTU3 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC3.69□□□□□ -1.82
Scn8aQ9WTU3 Gm22380-201ENSMUST00000157479 95 ntBASIC3.69□□□□□ -1.82
Scn8aQ9WTU3 Gm23865-201ENSMUST00000157723 97 ntBASIC3.69□□□□□ -1.82
Scn8aQ9WTU3 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Scn8aQ9WTU3 Vmn1r117-201ENSMUST00000166937 924 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Scn8aQ9WTU3 Vmn1r128-201ENSMUST00000169165 924 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Scn8aQ9WTU3 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Scn8aQ9WTU3 Vmn1r143-201ENSMUST00000171622 924 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Scn8aQ9WTU3 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC3.69□□□□□ -1.82
Scn8aQ9WTU3 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC3.69□□□□□ -1.82
Scn8aQ9WTU3 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC3.69□□□□□ -1.82
Scn8aQ9WTU3 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Scn8aQ9WTU3 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Scn8aQ9WTU3 Gm7117-201ENSMUST00000071515 387 ntBASIC3.69□□□□□ -1.82
Scn8aQ9WTU3 Mir99a-201ENSMUST00000083596 65 ntBASIC3.69□□□□□ -1.82
Scn8aQ9WTU3 Olfr1197-201ENSMUST00000099815 945 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Scn8aQ9WTU3 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
Scn8aQ9WTU3 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Scn8aQ9WTU3 Gm45223-201ENSMUST00000207037 5138 ntBASIC3.69□□□□□ -1.82
Scn8aQ9WTU3 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Scn8aQ9WTU3 Gm37064-201ENSMUST00000193851 2231 ntBASIC3.69□□□□□ -1.82
Scn8aQ9WTU3 Gm7709-201ENSMUST00000199391 1858 ntBASIC3.69□□□□□ -1.82
Scn8aQ9WTU3 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Scn8aQ9WTU3 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Scn8aQ9WTU3 Gm14621-201ENSMUST00000117709 689 ntBASIC3.69□□□□□ -1.82
Scn8aQ9WTU3 Gm14586-201ENSMUST00000119571 408 ntBASIC3.69□□□□□ -1.82
Scn8aQ9WTU3 Gm24730-201ENSMUST00000158228 117 ntBASIC3.69□□□□□ -1.82
Scn8aQ9WTU3 AC137950.3-201ENSMUST00000228250 246 ntBASIC3.69□□□□□ -1.82
Scn8aQ9WTU3 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC3.69□□□□□ -1.82
Scn8aQ9WTU3 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
Scn8aQ9WTU3 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Scn8aQ9WTU3 Gm42552-201ENSMUST00000196754 4497 ntBASIC3.68□□□□□ -1.82
Scn8aQ9WTU3 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC3.68□□□□□ -1.82
Scn8aQ9WTU3 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Scn8aQ9WTU3 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Scn8aQ9WTU3 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Scn8aQ9WTU3 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC3.68□□□□□ -1.82
Scn8aQ9WTU3 Gm15387-201ENSMUST00000120421 648 ntBASIC3.68□□□□□ -1.82
Scn8aQ9WTU3 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
Scn8aQ9WTU3 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Scn8aQ9WTU3 Gm24739-201ENSMUST00000158855 292 ntBASIC3.68□□□□□ -1.82
Scn8aQ9WTU3 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC3.68□□□□□ -1.82
Scn8aQ9WTU3 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC3.68□□□□□ -1.82
Scn8aQ9WTU3 Gm26141-201ENSMUST00000175299 126 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms