Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm43659-201ENSMUST00000200894 628 ntBASIC4.56□□□□□ -1.68
Vps28Q9D1C8 Gm43992-201ENSMUST00000204358 197 ntBASIC4.56□□□□□ -1.68
Vps28Q9D1C8 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Vps28Q9D1C8 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Vps28Q9D1C8 Gm35625-202ENSMUST00000211040 266 ntTSL 3 BASIC4.56□□□□□ -1.68
Vps28Q9D1C8 Gm45551-201ENSMUST00000211459 928 ntBASIC4.56□□□□□ -1.68
Vps28Q9D1C8 AC123835.1-201ENSMUST00000214362 670 ntBASIC4.56□□□□□ -1.68
Vps28Q9D1C8 AC166263.1-201ENSMUST00000218586 238 ntBASIC4.56□□□□□ -1.68
Vps28Q9D1C8 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC4.56□□□□□ -1.68
Vps28Q9D1C8 Gm46190-201ENSMUST00000219650 427 ntBASIC4.56□□□□□ -1.68
Vps28Q9D1C8 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Vps28Q9D1C8 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Vps28Q9D1C8 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Vps28Q9D1C8 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Vps28Q9D1C8 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC4.56□□□□□ -1.68
Vps28Q9D1C8 Gm23464-201ENSMUST00000083145 147 ntBASIC4.56□□□□□ -1.68
Vps28Q9D1C8 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Vps28Q9D1C8 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Vps28Q9D1C8 Gm37916-201ENSMUST00000192153 2435 ntBASIC4.56□□□□□ -1.68
Vps28Q9D1C8 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC4.56□□□□□ -1.68
Vps28Q9D1C8 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Vps28Q9D1C8 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Vps28Q9D1C8 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
Vps28Q9D1C8 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Vps28Q9D1C8 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Vps28Q9D1C8 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Vps28Q9D1C8 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Vps28Q9D1C8 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Vps28Q9D1C8 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Vps28Q9D1C8 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Vps28Q9D1C8 Gm45378-201ENSMUST00000211063 2711 ntBASIC4.55□□□□□ -1.68
Vps28Q9D1C8 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Vps28Q9D1C8 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Vps28Q9D1C8 Gm28441-201ENSMUST00000190927 1343 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Vps28Q9D1C8 Gm43329-201ENSMUST00000200120 3232 ntBASIC4.55□□□□□ -1.68
Vps28Q9D1C8 Gm42537-201ENSMUST00000198260 2574 ntBASIC4.55□□□□□ -1.68
Vps28Q9D1C8 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
Vps28Q9D1C8 Gm13785-201ENSMUST00000119099 690 ntBASIC4.55□□□□□ -1.68
Vps28Q9D1C8 Gm12852-201ENSMUST00000119478 719 ntBASIC4.55□□□□□ -1.68
Vps28Q9D1C8 Gm14989-201ENSMUST00000120497 207 ntBASIC4.55□□□□□ -1.68
Vps28Q9D1C8 Gm12978-201ENSMUST00000121250 522 ntBASIC4.55□□□□□ -1.68
Vps28Q9D1C8 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Vps28Q9D1C8 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC4.55□□□□□ -1.68
Vps28Q9D1C8 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Vps28Q9D1C8 Gm22968-201ENSMUST00000157955 118 ntBASIC4.55□□□□□ -1.68
Vps28Q9D1C8 Gm16236-201ENSMUST00000159588 379 ntBASIC4.55□□□□□ -1.68
Vps28Q9D1C8 Gm17061-201ENSMUST00000163167 499 ntBASIC4.55□□□□□ -1.68
Vps28Q9D1C8 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC4.55□□□□□ -1.68
Vps28Q9D1C8 Gm23638-201ENSMUST00000175073 126 ntBASIC4.55□□□□□ -1.68
Vps28Q9D1C8 Gm23158-201ENSMUST00000175076 126 ntBASIC4.55□□□□□ -1.68
Vps28Q9D1C8 Gm22907-201ENSMUST00000175198 126 ntBASIC4.55□□□□□ -1.68
Vps28Q9D1C8 Gm22625-201ENSMUST00000175382 126 ntBASIC4.55□□□□□ -1.68
Vps28Q9D1C8 Gm22875-201ENSMUST00000175449 126 ntBASIC4.55□□□□□ -1.68
Vps28Q9D1C8 Gm25197-201ENSMUST00000175516 126 ntBASIC4.55□□□□□ -1.68
Vps28Q9D1C8 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC4.55□□□□□ -1.68
Vps28Q9D1C8 Gm27857-201ENSMUST00000176930 126 ntBASIC4.55□□□□□ -1.68
Vps28Q9D1C8 Gm26268-201ENSMUST00000177685 126 ntBASIC4.55□□□□□ -1.68
Vps28Q9D1C8 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
Vps28Q9D1C8 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
Vps28Q9D1C8 Gm23681-201ENSMUST00000178821 126 ntBASIC4.55□□□□□ -1.68
Vps28Q9D1C8 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC4.55□□□□□ -1.68
Vps28Q9D1C8 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC4.55□□□□□ -1.68
Vps28Q9D1C8 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC4.55□□□□□ -1.68
Vps28Q9D1C8 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
Vps28Q9D1C8 Gm27940-201ENSMUST00000184449 98 ntBASIC4.55□□□□□ -1.68
Vps28Q9D1C8 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Vps28Q9D1C8 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC4.55□□□□□ -1.68
Vps28Q9D1C8 Gm4734-201ENSMUST00000200117 777 ntBASIC4.55□□□□□ -1.68
Vps28Q9D1C8 Gm7726-201ENSMUST00000206241 231 ntBASIC4.55□□□□□ -1.68
Vps28Q9D1C8 Gm17911-201ENSMUST00000210806 877 ntBASIC4.55□□□□□ -1.68
Vps28Q9D1C8 Gm9655-201ENSMUST00000211321 1284 ntBASIC4.55□□□□□ -1.68
Vps28Q9D1C8 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC4.55□□□□□ -1.68
Vps28Q9D1C8 Gm31931-201ENSMUST00000219666 222 ntBASIC4.55□□□□□ -1.68
Vps28Q9D1C8 AC165283.1-201ENSMUST00000223390 307 ntBASIC4.55□□□□□ -1.68
Vps28Q9D1C8 AC174797.4-201ENSMUST00000225510 347 ntBASIC4.55□□□□□ -1.68
Vps28Q9D1C8 Olfr906-201ENSMUST00000045493 936 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Vps28Q9D1C8 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC4.55□□□□□ -1.68
Vps28Q9D1C8 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Vps28Q9D1C8 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Vps28Q9D1C8 Olfr168-202ENSMUST00000213480 2205 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Vps28Q9D1C8 AC164297.6-201ENSMUST00000224643 1568 ntBASIC4.55□□□□□ -1.68
Vps28Q9D1C8 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC4.55□□□□□ -1.68
Vps28Q9D1C8 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Vps28Q9D1C8 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
Vps28Q9D1C8 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Vps28Q9D1C8 Hm629797-201ENSMUST00000183645 2398 ntBASIC4.55□□□□□ -1.68
Vps28Q9D1C8 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Vps28Q9D1C8 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Vps28Q9D1C8 Gm42479-201ENSMUST00000198654 1356 ntBASIC4.54□□□□□ -1.68
Vps28Q9D1C8 Gm45263-201ENSMUST00000210377 1375 ntBASIC4.54□□□□□ -1.68
Vps28Q9D1C8 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Vps28Q9D1C8 Gm44567-201ENSMUST00000205645 2631 ntBASIC4.54□□□□□ -1.68
Vps28Q9D1C8 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Vps28Q9D1C8 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Vps28Q9D1C8 Gm14142-201ENSMUST00000117833 296 ntBASIC4.54□□□□□ -1.68
Vps28Q9D1C8 Gm5942-201ENSMUST00000120046 439 ntBASIC4.54□□□□□ -1.68
Vps28Q9D1C8 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC4.54□□□□□ -1.68
Vps28Q9D1C8 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC4.54□□□□□ -1.68
Vps28Q9D1C8 Ugt2a2-202ENSMUST00000144144 929 ntTSL 2 BASIC4.54□□□□□ -1.68
Vps28Q9D1C8 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC4.54□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms