Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Mir3471-2-201ENSMUST00000174896 102 ntBASIC3.57□□□□□ -1.84
Cdh23Q99PF4 Gm13147-202ENSMUST00000177526 1173 ntBASIC3.57□□□□□ -1.84
Cdh23Q99PF4 Gm27538-201ENSMUST00000185065 294 ntBASIC3.57□□□□□ -1.84
Cdh23Q99PF4 Olfr1093-201ENSMUST00000055273 969 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Cdh23Q99PF4 Gm42549-201ENSMUST00000202392 7004 ntBASIC3.57□□□□□ -1.84
Cdh23Q99PF4 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Cdh23Q99PF4 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Cdh23Q99PF4 Olfr1085-202ENSMUST00000213279 5191 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Cdh23Q99PF4 Map1b-201ENSMUST00000064762 11808 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Cdh23Q99PF4 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
Cdh23Q99PF4 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC3.57□□□□□ -1.84
Cdh23Q99PF4 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Cdh23Q99PF4 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Cdh23Q99PF4 Gm11913-201ENSMUST00000119094 336 ntBASIC3.57□□□□□ -1.84
Cdh23Q99PF4 Gm4207-201ENSMUST00000173144 960 ntBASIC3.57□□□□□ -1.84
Cdh23Q99PF4 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC3.57□□□□□ -1.84
Cdh23Q99PF4 Gm37701-201ENSMUST00000192947 1100 ntBASIC3.57□□□□□ -1.84
Cdh23Q99PF4 AC153948.1-201ENSMUST00000219080 3838 ntBASIC3.57□□□□□ -1.84
Cdh23Q99PF4 AC099578.1-201ENSMUST00000220147 435 ntBASIC3.57□□□□□ -1.84
Cdh23Q99PF4 4930455B14Rik-204ENSMUST00000224776 848 ntBASIC3.57□□□□□ -1.84
Cdh23Q99PF4 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Cdh23Q99PF4 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Cdh23Q99PF4 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
Cdh23Q99PF4 Gm43844-201ENSMUST00000202926 5605 ntBASIC3.57□□□□□ -1.84
Cdh23Q99PF4 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC3.57□□□□□ -1.84
Cdh23Q99PF4 Gm16218-201ENSMUST00000155424 388 ntBASIC3.57□□□□□ -1.84
Cdh23Q99PF4 Gm17117-201ENSMUST00000163665 299 ntBASIC3.57□□□□□ -1.84
Cdh23Q99PF4 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC3.57□□□□□ -1.84
Cdh23Q99PF4 Gm28186-201ENSMUST00000187447 679 ntBASIC3.57□□□□□ -1.84
Cdh23Q99PF4 Gm22043-201ENSMUST00000082993 158 ntBASIC3.57□□□□□ -1.84
Cdh23Q99PF4 Gm42520-201ENSMUST00000199642 1502 ntBASIC3.57□□□□□ -1.84
Cdh23Q99PF4 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC3.57□□□□□ -1.84
Cdh23Q99PF4 Gm38375-201ENSMUST00000194610 2227 ntBASIC3.57□□□□□ -1.84
Cdh23Q99PF4 Gm37195-201ENSMUST00000192006 3018 ntBASIC3.57□□□□□ -1.84
Cdh23Q99PF4 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC3.56□□□□□ -1.84
Cdh23Q99PF4 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Cdh23Q99PF4 Chd8-201ENSMUST00000089752 8190 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Cdh23Q99PF4 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Cdh23Q99PF4 Gm12813-201ENSMUST00000119615 902 ntBASIC3.56□□□□□ -1.84
Cdh23Q99PF4 Gm13581-201ENSMUST00000120675 278 ntBASIC3.56□□□□□ -1.84
Cdh23Q99PF4 Gm6762-201ENSMUST00000121769 289 ntBASIC3.56□□□□□ -1.84
Cdh23Q99PF4 Gm24691-201ENSMUST00000157762 140 ntBASIC3.56□□□□□ -1.84
Cdh23Q99PF4 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Cdh23Q99PF4 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC3.56□□□□□ -1.84
Cdh23Q99PF4 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Cdh23Q99PF4 Olfr948-201ENSMUST00000076516 966 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Cdh23Q99PF4 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Cdh23Q99PF4 Gm43032-201ENSMUST00000197967 3123 ntBASIC3.56□□□□□ -1.84
Cdh23Q99PF4 Gm38070-201ENSMUST00000191850 6480 ntBASIC3.56□□□□□ -1.84
Cdh23Q99PF4 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Cdh23Q99PF4 Gm42583-201ENSMUST00000202678 6700 ntBASIC3.56□□□□□ -1.84
Cdh23Q99PF4 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Cdh23Q99PF4 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Cdh23Q99PF4 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Cdh23Q99PF4 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Cdh23Q99PF4 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC3.56□□□□□ -1.84
Cdh23Q99PF4 Onecut2-202ENSMUST00000175965 13391 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
Cdh23Q99PF4 Frmpd4-202ENSMUST00000112146 8153 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
Cdh23Q99PF4 Gm13321-201ENSMUST00000117101 400 ntBASIC3.56□□□□□ -1.84
Cdh23Q99PF4 Gm12722-201ENSMUST00000118507 493 ntBASIC3.56□□□□□ -1.84
Cdh23Q99PF4 Olfr1397-ps1-201ENSMUST00000121388 962 ntBASIC3.56□□□□□ -1.84
Cdh23Q99PF4 Gm15819-201ENSMUST00000153089 481 ntTSL 2 BASIC3.56□□□□□ -1.84
Cdh23Q99PF4 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC3.56□□□□□ -1.84
Cdh23Q99PF4 Gm42593-201ENSMUST00000198469 377 ntBASIC3.56□□□□□ -1.84
Cdh23Q99PF4 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC3.56□□□□□ -1.84
Cdh23Q99PF4 Olfr273-201ENSMUST00000051520 1059 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Cdh23Q99PF4 Olfr768-201ENSMUST00000063031 939 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Cdh23Q99PF4 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Cdh23Q99PF4 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Cdh23Q99PF4 AC125487.2-201ENSMUST00000219810 1300 ntBASIC3.56□□□□□ -1.84
Cdh23Q99PF4 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC3.56□□□□□ -1.84
Cdh23Q99PF4 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Cdh23Q99PF4 Gm28835-202ENSMUST00000189206 543 ntTSL 3 BASIC3.55□□□□□ -1.84
Cdh23Q99PF4 Gm24350-202ENSMUST00000198309 132 ntBASIC3.55□□□□□ -1.84
Cdh23Q99PF4 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Cdh23Q99PF4 Olfr767-202ENSMUST00000213579 5493 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Cdh23Q99PF4 Olfr1176-202ENSMUST00000213778 2823 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Cdh23Q99PF4 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
Cdh23Q99PF4 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
Cdh23Q99PF4 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Cdh23Q99PF4 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Cdh23Q99PF4 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC3.55□□□□□ -1.84
Cdh23Q99PF4 Gm26145-201ENSMUST00000104476 127 ntBASIC3.55□□□□□ -1.84
Cdh23Q99PF4 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC3.55□□□□□ -1.84
Cdh23Q99PF4 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Cdh23Q99PF4 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
Cdh23Q99PF4 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Cdh23Q99PF4 Gm20656-201ENSMUST00000176925 518 ntBASIC3.55□□□□□ -1.84
Cdh23Q99PF4 Gm43214-201ENSMUST00000199242 352 ntBASIC3.55□□□□□ -1.84
Cdh23Q99PF4 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Cdh23Q99PF4 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Cdh23Q99PF4 Gm18441-201ENSMUST00000223539 617 ntBASIC3.55□□□□□ -1.84
Cdh23Q99PF4 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Cdh23Q99PF4 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
Cdh23Q99PF4 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
Cdh23Q99PF4 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
Cdh23Q99PF4 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
Cdh23Q99PF4 Dnah10-203ENSMUST00000141137 13862 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
Cdh23Q99PF4 Gm42486-201ENSMUST00000200369 3486 ntBASIC3.55□□□□□ -1.84
Cdh23Q99PF4 Ksr2-202ENSMUST00000180430 13125 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms