Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Clp1Q99LI9 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Clp1Q99LI9 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC6□□□□□ -1.45
Clp1Q99LI9 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Clp1Q99LI9 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Clp1Q99LI9 Gm37076-201ENSMUST00000192033 2294 ntBASIC6□□□□□ -1.45
Clp1Q99LI9 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC6□□□□□ -1.45
Clp1Q99LI9 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Clp1Q99LI9 Pirt-201ENSMUST00000123434 4200 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Clp1Q99LI9 Olfr310-202ENSMUST00000217724 1400 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Clp1Q99LI9 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC5.99□□□□□ -1.45
Clp1Q99LI9 Gm37773-201ENSMUST00000194141 2120 ntBASIC5.99□□□□□ -1.45
Clp1Q99LI9 Gm44789-201ENSMUST00000207195 3101 ntBASIC5.99□□□□□ -1.45
Clp1Q99LI9 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Clp1Q99LI9 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Clp1Q99LI9 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC5.99□□□□□ -1.45
Clp1Q99LI9 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Clp1Q99LI9 AC155298.1-201ENSMUST00000225350 3250 ntBASIC5.99□□□□□ -1.45
Clp1Q99LI9 Olfr527-202ENSMUST00000214143 3094 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Clp1Q99LI9 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Clp1Q99LI9 Gm13119-201ENSMUST00000094526 2094 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Clp1Q99LI9 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Clp1Q99LI9 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Clp1Q99LI9 Mir147-201ENSMUST00000102354 79 ntBASIC5.99□□□□□ -1.45
Clp1Q99LI9 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Clp1Q99LI9 Gm14909-201ENSMUST00000117853 351 ntBASIC5.99□□□□□ -1.45
Clp1Q99LI9 Gm15803-201ENSMUST00000120118 394 ntBASIC5.99□□□□□ -1.45
Clp1Q99LI9 Mup-ps18-201ENSMUST00000120145 531 ntBASIC5.99□□□□□ -1.45
Clp1Q99LI9 Gm24385-201ENSMUST00000122694 350 ntBASIC5.99□□□□□ -1.45
Clp1Q99LI9 Gm16060-201ENSMUST00000153140 478 ntBASIC5.99□□□□□ -1.45
Clp1Q99LI9 Gm11507-201ENSMUST00000156462 412 ntBASIC5.99□□□□□ -1.45
Clp1Q99LI9 Gm26348-201ENSMUST00000157528 240 ntBASIC5.99□□□□□ -1.45
Clp1Q99LI9 Gm25430-201ENSMUST00000157614 289 ntBASIC5.99□□□□□ -1.45
Clp1Q99LI9 Gm16290-201ENSMUST00000161175 474 ntBASIC5.99□□□□□ -1.45
Clp1Q99LI9 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC5.99□□□□□ -1.45
Clp1Q99LI9 Mir7685-201ENSMUST00000183555 62 ntBASIC5.99□□□□□ -1.45
Clp1Q99LI9 Gm27543-201ENSMUST00000183562 177 ntBASIC5.99□□□□□ -1.45
Clp1Q99LI9 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Clp1Q99LI9 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC5.99□□□□□ -1.45
Clp1Q99LI9 Gm33354-201ENSMUST00000195448 906 ntBASIC5.99□□□□□ -1.45
Clp1Q99LI9 Gm5660-201ENSMUST00000197453 1149 ntBASIC5.99□□□□□ -1.45
Clp1Q99LI9 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Clp1Q99LI9 Gm43436-201ENSMUST00000199308 147 ntBASIC5.99□□□□□ -1.45
Clp1Q99LI9 Gm18100-201ENSMUST00000200897 452 ntBASIC5.99□□□□□ -1.45
Clp1Q99LI9 Gm19880-201ENSMUST00000207731 318 ntBASIC5.99□□□□□ -1.45
Clp1Q99LI9 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC5.99□□□□□ -1.45
Clp1Q99LI9 Gm45375-201ENSMUST00000210338 280 ntBASIC5.99□□□□□ -1.45
Clp1Q99LI9 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC5.99□□□□□ -1.45
Clp1Q99LI9 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
Clp1Q99LI9 Gm18541-201ENSMUST00000215935 538 ntBASIC5.99□□□□□ -1.45
Clp1Q99LI9 AC117240.2-201ENSMUST00000220921 263 ntBASIC5.99□□□□□ -1.45
Clp1Q99LI9 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC5.99□□□□□ -1.45
Clp1Q99LI9 AC154627.3-201ENSMUST00000228441 334 ntBASIC5.99□□□□□ -1.45
Clp1Q99LI9 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Clp1Q99LI9 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Clp1Q99LI9 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Clp1Q99LI9 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Clp1Q99LI9 Gm37926-201ENSMUST00000191922 2424 ntBASIC5.99□□□□□ -1.45
Clp1Q99LI9 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC5.99□□□□□ -1.45
Clp1Q99LI9 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Clp1Q99LI9 Gm12633-201ENSMUST00000117742 1705 ntBASIC5.99□□□□□ -1.45
Clp1Q99LI9 AC126673.3-201ENSMUST00000223414 3829 ntBASIC5.99□□□□□ -1.45
Clp1Q99LI9 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC5.99□□□□□ -1.45
Clp1Q99LI9 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Clp1Q99LI9 Gm37527-201ENSMUST00000192406 3547 ntBASIC5.99□□□□□ -1.45
Clp1Q99LI9 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Clp1Q99LI9 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC5.98□□□□□ -1.45
Clp1Q99LI9 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Clp1Q99LI9 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Clp1Q99LI9 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Clp1Q99LI9 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
Clp1Q99LI9 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Clp1Q99LI9 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Clp1Q99LI9 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Clp1Q99LI9 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Clp1Q99LI9 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Clp1Q99LI9 LOC102637012-201ENSMUST00000217248 2562 ntBASIC5.98□□□□□ -1.45
Clp1Q99LI9 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Clp1Q99LI9 Gm22834-201ENSMUST00000102021 79 ntBASIC5.98□□□□□ -1.45
Clp1Q99LI9 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Clp1Q99LI9 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Clp1Q99LI9 Gm14711-201ENSMUST00000117056 217 ntBASIC5.98□□□□□ -1.45
Clp1Q99LI9 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC5.98□□□□□ -1.45
Clp1Q99LI9 Gm23211-201ENSMUST00000122717 308 ntBASIC5.98□□□□□ -1.45
Clp1Q99LI9 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC5.98□□□□□ -1.45
Clp1Q99LI9 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC5.98□□□□□ -1.45
Clp1Q99LI9 Gm23167-201ENSMUST00000157155 103 ntBASIC5.98□□□□□ -1.45
Clp1Q99LI9 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Clp1Q99LI9 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC5.98□□□□□ -1.45
Clp1Q99LI9 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Clp1Q99LI9 Gm21991-201ENSMUST00000180006 508 ntBASIC5.98□□□□□ -1.45
Clp1Q99LI9 Gm27754-201ENSMUST00000183340 126 ntBASIC5.98□□□□□ -1.45
Clp1Q99LI9 Gm27541-201ENSMUST00000184078 122 ntBASIC5.98□□□□□ -1.45
Clp1Q99LI9 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
Clp1Q99LI9 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC5.98□□□□□ -1.45
Clp1Q99LI9 Gm43406-201ENSMUST00000200356 334 ntBASIC5.98□□□□□ -1.45
Clp1Q99LI9 Gm43976-201ENSMUST00000203637 235 ntBASIC5.98□□□□□ -1.45
Clp1Q99LI9 Gm44687-201ENSMUST00000204975 235 ntBASIC5.98□□□□□ -1.45
Clp1Q99LI9 Gm45105-201ENSMUST00000207824 397 ntBASIC5.98□□□□□ -1.45
Clp1Q99LI9 Gm17766-201ENSMUST00000209223 442 ntBASIC5.98□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 106.3 ms