Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm12190-201ENSMUST00000120001 187 ntBASIC3.8□□□□□ -1.8
Lsm1Q8VC85 Gm12486-201ENSMUST00000120887 541 ntBASIC3.8□□□□□ -1.8
Lsm1Q8VC85 Gm16327-201ENSMUST00000137146 228 ntBASIC3.8□□□□□ -1.8
Lsm1Q8VC85 Gm16060-201ENSMUST00000153140 478 ntBASIC3.8□□□□□ -1.8
Lsm1Q8VC85 Gm23959-201ENSMUST00000157208 324 ntBASIC3.8□□□□□ -1.8
Lsm1Q8VC85 Gm24014-201ENSMUST00000157728 157 ntBASIC3.8□□□□□ -1.8
Lsm1Q8VC85 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Lsm1Q8VC85 Gm23633-201ENSMUST00000175293 119 ntBASIC3.8□□□□□ -1.8
Lsm1Q8VC85 Mir3090-201ENSMUST00000175597 87 ntBASIC3.8□□□□□ -1.8
Lsm1Q8VC85 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Lsm1Q8VC85 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC3.8□□□□□ -1.8
Lsm1Q8VC85 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC3.8□□□□□ -1.8
Lsm1Q8VC85 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC3.8□□□□□ -1.8
Lsm1Q8VC85 Gm28654-201ENSMUST00000189801 379 ntBASIC3.8□□□□□ -1.8
Lsm1Q8VC85 Gm18547-201ENSMUST00000192439 811 ntBASIC3.8□□□□□ -1.8
Lsm1Q8VC85 Gm4045-201ENSMUST00000204076 310 ntBASIC3.8□□□□□ -1.8
Lsm1Q8VC85 AC153544.1-201ENSMUST00000217988 400 ntBASIC3.8□□□□□ -1.8
Lsm1Q8VC85 AC138401.2-201ENSMUST00000220461 365 ntBASIC3.8□□□□□ -1.8
Lsm1Q8VC85 Gm40394-201ENSMUST00000221321 633 ntTSL 5 BASIC3.8□□□□□ -1.8
Lsm1Q8VC85 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Lsm1Q8VC85 AC132336.1-201ENSMUST00000222844 1740 ntBASIC3.8□□□□□ -1.8
Lsm1Q8VC85 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Lsm1Q8VC85 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Lsm1Q8VC85 Gm37652-201ENSMUST00000195290 2095 ntBASIC3.8□□□□□ -1.8
Lsm1Q8VC85 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC3.8□□□□□ -1.8
Lsm1Q8VC85 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
Lsm1Q8VC85 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Lsm1Q8VC85 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
Lsm1Q8VC85 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
Lsm1Q8VC85 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
Lsm1Q8VC85 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC3.79□□□□□ -1.8
Lsm1Q8VC85 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Lsm1Q8VC85 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Lsm1Q8VC85 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
Lsm1Q8VC85 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Lsm1Q8VC85 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Lsm1Q8VC85 4933400A11Rik-203ENSMUST00000112102 1101 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Lsm1Q8VC85 Gm13268-201ENSMUST00000117485 433 ntBASIC3.79□□□□□ -1.8
Lsm1Q8VC85 Gm14688-201ENSMUST00000119169 303 ntBASIC3.79□□□□□ -1.8
Lsm1Q8VC85 Olfr990-ps1-201ENSMUST00000120485 904 ntBASIC3.79□□□□□ -1.8
Lsm1Q8VC85 Gm13460-201ENSMUST00000121274 353 ntBASIC3.79□□□□□ -1.8
Lsm1Q8VC85 Gm25177-201ENSMUST00000122634 117 ntBASIC3.79□□□□□ -1.8
Lsm1Q8VC85 Gm23905-201ENSMUST00000157568 109 ntBASIC3.79□□□□□ -1.8
Lsm1Q8VC85 Gm24930-201ENSMUST00000158315 83 ntBASIC3.79□□□□□ -1.8
Lsm1Q8VC85 Gm3053-201ENSMUST00000161709 616 ntBASIC3.79□□□□□ -1.8
Lsm1Q8VC85 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC3.79□□□□□ -1.8
Lsm1Q8VC85 Gm6155-201ENSMUST00000173735 341 ntBASIC3.79□□□□□ -1.8
Lsm1Q8VC85 Gm21241-201ENSMUST00000179551 934 ntBASIC3.79□□□□□ -1.8
Lsm1Q8VC85 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC3.79□□□□□ -1.8
Lsm1Q8VC85 Gm27414-201ENSMUST00000185033 381 ntBASIC3.79□□□□□ -1.8
Lsm1Q8VC85 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Lsm1Q8VC85 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.79□□□□□ -1.8
Lsm1Q8VC85 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Lsm1Q8VC85 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Lsm1Q8VC85 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Lsm1Q8VC85 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Lsm1Q8VC85 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Lsm1Q8VC85 Gm29598-201ENSMUST00000188996 588 ntBASIC3.79□□□□□ -1.8
Lsm1Q8VC85 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Lsm1Q8VC85 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Lsm1Q8VC85 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Lsm1Q8VC85 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Lsm1Q8VC85 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Lsm1Q8VC85 Gm20819-201ENSMUST00000191091 925 ntBASIC3.79□□□□□ -1.8
Lsm1Q8VC85 Gm20871-201ENSMUST00000191322 931 ntBASIC3.79□□□□□ -1.8
Lsm1Q8VC85 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Lsm1Q8VC85 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Lsm1Q8VC85 Gm18529-201ENSMUST00000193025 1257 ntBASIC3.79□□□□□ -1.8
Lsm1Q8VC85 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Lsm1Q8VC85 Gm45554-202ENSMUST00000210964 1090 ntTSL 5 BASIC3.79□□□□□ -1.8
Lsm1Q8VC85 AC140930.4-201ENSMUST00000220750 150 ntBASIC3.79□□□□□ -1.8
Lsm1Q8VC85 AC158955.1-201ENSMUST00000227140 385 ntBASIC3.79□□□□□ -1.8
Lsm1Q8VC85 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Lsm1Q8VC85 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC3.79□□□□□ -1.8
Lsm1Q8VC85 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Lsm1Q8VC85 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Lsm1Q8VC85 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Lsm1Q8VC85 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Lsm1Q8VC85 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Lsm1Q8VC85 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC3.79□□□□□ -1.8
Lsm1Q8VC85 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Lsm1Q8VC85 Gm30292-201ENSMUST00000194198 3000 ntTSL 3 BASIC3.78□□□□□ -1.8
Lsm1Q8VC85 Gm15560-201ENSMUST00000117107 643 ntBASIC3.78□□□□□ -1.8
Lsm1Q8VC85 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC3.78□□□□□ -1.8
Lsm1Q8VC85 Gm15377-201ENSMUST00000119594 246 ntBASIC3.78□□□□□ -1.8
Lsm1Q8VC85 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC3.78□□□□□ -1.8
Lsm1Q8VC85 Gm11483-201ENSMUST00000119839 247 ntBASIC3.78□□□□□ -1.8
Lsm1Q8VC85 Gm11718-201ENSMUST00000119942 537 ntBASIC3.78□□□□□ -1.8
Lsm1Q8VC85 Gm13009-201ENSMUST00000121307 267 ntBASIC3.78□□□□□ -1.8
Lsm1Q8VC85 Gm11931-201ENSMUST00000121630 447 ntBASIC3.78□□□□□ -1.8
Lsm1Q8VC85 Gm23789-201ENSMUST00000122536 301 ntBASIC3.78□□□□□ -1.8
Lsm1Q8VC85 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC3.78□□□□□ -1.8
Lsm1Q8VC85 Gm26312-201ENSMUST00000157769 165 ntBASIC3.78□□□□□ -1.8
Lsm1Q8VC85 Gm16571-201ENSMUST00000159112 291 ntBASIC3.78□□□□□ -1.8
Lsm1Q8VC85 Gm2862-201ENSMUST00000161524 328 ntBASIC3.78□□□□□ -1.8
Lsm1Q8VC85 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC3.78□□□□□ -1.8
Lsm1Q8VC85 Gm5372-201ENSMUST00000187540 409 ntBASIC3.78□□□□□ -1.8
Lsm1Q8VC85 Gm28920-201ENSMUST00000189957 699 ntBASIC3.78□□□□□ -1.8
Lsm1Q8VC85 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Lsm1Q8VC85 Gm28155-201ENSMUST00000191066 151 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 90.2 ms