Protein–RNA interactions for Protein: Q8K2Z2

Prpf39, Pre-mRNA-processing factor 39, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39Q8K2Z2 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Prpf39Q8K2Z2 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
Prpf39Q8K2Z2 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Prpf39Q8K2Z2 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Prpf39Q8K2Z2 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC4.35□□□□□ -1.71
Prpf39Q8K2Z2 Gm43508-201ENSMUST00000197251 3783 ntBASIC4.35□□□□□ -1.71
Prpf39Q8K2Z2 Gm25726-201ENSMUST00000104529 129 ntBASIC4.35□□□□□ -1.71
Prpf39Q8K2Z2 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Prpf39Q8K2Z2 Znrd1-201ENSMUST00000113669 742 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Prpf39Q8K2Z2 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Prpf39Q8K2Z2 Gm15076-201ENSMUST00000117076 474 ntBASIC4.35□□□□□ -1.71
Prpf39Q8K2Z2 Gm13478-201ENSMUST00000118312 413 ntBASIC4.35□□□□□ -1.71
Prpf39Q8K2Z2 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC4.35□□□□□ -1.71
Prpf39Q8K2Z2 Magea9-ps-201ENSMUST00000140655 732 ntBASIC4.35□□□□□ -1.71
Prpf39Q8K2Z2 Magea9-ps-202ENSMUST00000167328 899 ntBASIC4.35□□□□□ -1.71
Prpf39Q8K2Z2 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC4.35□□□□□ -1.71
Prpf39Q8K2Z2 Gm23215-201ENSMUST00000178153 121 ntBASIC4.35□□□□□ -1.71
Prpf39Q8K2Z2 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC4.35□□□□□ -1.71
Prpf39Q8K2Z2 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC4.35□□□□□ -1.71
Prpf39Q8K2Z2 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC4.35□□□□□ -1.71
Prpf39Q8K2Z2 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC4.35□□□□□ -1.71
Prpf39Q8K2Z2 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC4.35□□□□□ -1.71
Prpf39Q8K2Z2 Mir6537-201ENSMUST00000184150 110 ntBASIC4.35□□□□□ -1.71
Prpf39Q8K2Z2 Mir6986-201ENSMUST00000184483 58 ntBASIC4.35□□□□□ -1.71
Prpf39Q8K2Z2 Gm28263-201ENSMUST00000185884 400 ntBASIC4.35□□□□□ -1.71
Prpf39Q8K2Z2 Gm28685-201ENSMUST00000187545 1101 ntBASIC4.35□□□□□ -1.71
Prpf39Q8K2Z2 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC4.35□□□□□ -1.71
Prpf39Q8K2Z2 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC4.35□□□□□ -1.71
Prpf39Q8K2Z2 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC4.35□□□□□ -1.71
Prpf39Q8K2Z2 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC4.35□□□□□ -1.71
Prpf39Q8K2Z2 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC4.35□□□□□ -1.71
Prpf39Q8K2Z2 Gm37300-201ENSMUST00000193327 280 ntBASIC4.35□□□□□ -1.71
Prpf39Q8K2Z2 Gm7897-201ENSMUST00000193981 554 ntBASIC4.35□□□□□ -1.71
Prpf39Q8K2Z2 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC4.35□□□□□ -1.71
Prpf39Q8K2Z2 Gm43494-201ENSMUST00000197672 388 ntBASIC4.35□□□□□ -1.71
Prpf39Q8K2Z2 Gm4859-201ENSMUST00000199625 787 ntBASIC4.35□□□□□ -1.71
Prpf39Q8K2Z2 Gm8132-201ENSMUST00000204938 640 ntBASIC4.35□□□□□ -1.71
Prpf39Q8K2Z2 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Prpf39Q8K2Z2 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC4.35□□□□□ -1.71
Prpf39Q8K2Z2 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Prpf39Q8K2Z2 Gm19232-201ENSMUST00000211621 652 ntBASIC4.35□□□□□ -1.71
Prpf39Q8K2Z2 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC4.35□□□□□ -1.71
Prpf39Q8K2Z2 AC140930.4-201ENSMUST00000220750 150 ntBASIC4.35□□□□□ -1.71
Prpf39Q8K2Z2 AC130547.1-201ENSMUST00000228079 1047 ntBASIC4.35□□□□□ -1.71
Prpf39Q8K2Z2 Vmn1r28-203ENSMUST00000228678 909 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Prpf39Q8K2Z2 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Prpf39Q8K2Z2 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Prpf39Q8K2Z2 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
Prpf39Q8K2Z2 Olfr205-201ENSMUST00000074125 990 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Prpf39Q8K2Z2 Olfr911-ps1-201ENSMUST00000074987 940 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Prpf39Q8K2Z2 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Prpf39Q8K2Z2 Gm7381-201ENSMUST00000098958 300 ntBASIC4.35□□□□□ -1.71
Prpf39Q8K2Z2 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Prpf39Q8K2Z2 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Prpf39Q8K2Z2 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Prpf39Q8K2Z2 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Prpf39Q8K2Z2 Gm36951-201ENSMUST00000193840 2687 ntBASIC4.35□□□□□ -1.71
Prpf39Q8K2Z2 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Prpf39Q8K2Z2 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Prpf39Q8K2Z2 AC123858.1-201ENSMUST00000226948 1874 ntBASIC4.35□□□□□ -1.71
Prpf39Q8K2Z2 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Prpf39Q8K2Z2 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Prpf39Q8K2Z2 Gm5248-201ENSMUST00000186108 4046 ntBASIC4.34□□□□□ -1.71
Prpf39Q8K2Z2 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Prpf39Q8K2Z2 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC4.34□□□□□ -1.71
Prpf39Q8K2Z2 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Prpf39Q8K2Z2 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC4.34□□□□□ -1.71
Prpf39Q8K2Z2 Gm22778-201ENSMUST00000104090 128 ntBASIC4.34□□□□□ -1.71
Prpf39Q8K2Z2 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
Prpf39Q8K2Z2 Gm5060-201ENSMUST00000120072 599 ntBASIC4.34□□□□□ -1.71
Prpf39Q8K2Z2 Gm4852-201ENSMUST00000121202 729 ntBASIC4.34□□□□□ -1.71
Prpf39Q8K2Z2 Gm25913-201ENSMUST00000157617 135 ntBASIC4.34□□□□□ -1.71
Prpf39Q8K2Z2 Gm24773-201ENSMUST00000158513 99 ntBASIC4.34□□□□□ -1.71
Prpf39Q8K2Z2 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC4.34□□□□□ -1.71
Prpf39Q8K2Z2 Gm22693-201ENSMUST00000175049 442 ntBASIC4.34□□□□□ -1.71
Prpf39Q8K2Z2 Gm22392-201ENSMUST00000177971 107 ntBASIC4.34□□□□□ -1.71
Prpf39Q8K2Z2 Gm27190-201ENSMUST00000184890 542 ntBASIC4.34□□□□□ -1.71
Prpf39Q8K2Z2 Gm37209-201ENSMUST00000194109 1276 ntBASIC4.34□□□□□ -1.71
Prpf39Q8K2Z2 Gm19131-201ENSMUST00000203408 789 ntBASIC4.34□□□□□ -1.71
Prpf39Q8K2Z2 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC4.34□□□□□ -1.71
Prpf39Q8K2Z2 AC151843.1-201ENSMUST00000215960 691 ntBASIC4.34□□□□□ -1.71
Prpf39Q8K2Z2 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC4.34□□□□□ -1.71
Prpf39Q8K2Z2 AC170086.1-201ENSMUST00000225190 497 ntBASIC4.34□□□□□ -1.71
Prpf39Q8K2Z2 AC126690.1-201ENSMUST00000228898 397 ntBASIC4.34□□□□□ -1.71
Prpf39Q8K2Z2 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Prpf39Q8K2Z2 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Prpf39Q8K2Z2 n-R5s86-201ENSMUST00000083215 119 ntBASIC4.34□□□□□ -1.71
Prpf39Q8K2Z2 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Prpf39Q8K2Z2 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Prpf39Q8K2Z2 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Prpf39Q8K2Z2 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Prpf39Q8K2Z2 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
Prpf39Q8K2Z2 Gm7957-201ENSMUST00000207404 2602 ntBASIC4.34□□□□□ -1.72
Prpf39Q8K2Z2 AC153969.1-201ENSMUST00000214047 2605 ntBASIC4.34□□□□□ -1.72
Prpf39Q8K2Z2 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
Prpf39Q8K2Z2 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Prpf39Q8K2Z2 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Prpf39Q8K2Z2 AC126673.1-201ENSMUST00000223208 3856 ntBASIC4.33□□□□□ -1.72
Prpf39Q8K2Z2 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Prpf39Q8K2Z2 Snora64-201ENSMUST00000104521 134 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 118.2 ms