Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm14878-201ENSMUST00000118167 293 ntBASIC5.37□□□□□ -1.55
Vps53Q8CCB4 Gm14986-201ENSMUST00000121262 1002 ntBASIC5.37□□□□□ -1.55
Vps53Q8CCB4 Gm23429-201ENSMUST00000122486 149 ntBASIC5.37□□□□□ -1.55
Vps53Q8CCB4 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Vps53Q8CCB4 Gm23501-201ENSMUST00000157744 256 ntBASIC5.37□□□□□ -1.55
Vps53Q8CCB4 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Vps53Q8CCB4 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC5.37□□□□□ -1.55
Vps53Q8CCB4 Gm18417-201ENSMUST00000176564 648 ntBASIC5.37□□□□□ -1.55
Vps53Q8CCB4 Gm22395-201ENSMUST00000177427 96 ntBASIC5.37□□□□□ -1.55
Vps53Q8CCB4 Mir6960-201ENSMUST00000183449 61 ntBASIC5.37□□□□□ -1.55
Vps53Q8CCB4 Gm4557-201ENSMUST00000185826 907 ntBASIC5.37□□□□□ -1.55
Vps53Q8CCB4 Gm4526-201ENSMUST00000186039 920 ntBASIC5.37□□□□□ -1.55
Vps53Q8CCB4 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC5.37□□□□□ -1.55
Vps53Q8CCB4 Gm8708-201ENSMUST00000188500 906 ntBASIC5.37□□□□□ -1.55
Vps53Q8CCB4 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC5.37□□□□□ -1.55
Vps53Q8CCB4 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC5.37□□□□□ -1.55
Vps53Q8CCB4 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC5.37□□□□□ -1.55
Vps53Q8CCB4 Gm19572-201ENSMUST00000214326 338 ntBASIC5.37□□□□□ -1.55
Vps53Q8CCB4 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC5.37□□□□□ -1.55
Vps53Q8CCB4 Gm18704-201ENSMUST00000219736 446 ntBASIC5.37□□□□□ -1.55
Vps53Q8CCB4 Pah-204ENSMUST00000219813 789 ntTSL 3 BASIC5.37□□□□□ -1.55
Vps53Q8CCB4 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC5.37□□□□□ -1.55
Vps53Q8CCB4 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC5.37□□□□□ -1.55
Vps53Q8CCB4 Gm18388-201ENSMUST00000222339 557 ntBASIC5.37□□□□□ -1.55
Vps53Q8CCB4 AC125523.1-201ENSMUST00000228018 934 ntBASIC5.37□□□□□ -1.55
Vps53Q8CCB4 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Vps53Q8CCB4 E330017A01Rik-201ENSMUST00000053249 1108 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Vps53Q8CCB4 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Vps53Q8CCB4 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Vps53Q8CCB4 Olfr1297-201ENSMUST00000099612 939 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Vps53Q8CCB4 Zfp11-201ENSMUST00000049778 3929 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Vps53Q8CCB4 Mapk8-203ENSMUST00000111943 1310 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Vps53Q8CCB4 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Vps53Q8CCB4 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC5.37□□□□□ -1.55
Vps53Q8CCB4 Gm14797-201ENSMUST00000119378 1480 ntBASIC5.37□□□□□ -1.55
Vps53Q8CCB4 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC5.37□□□□□ -1.55
Vps53Q8CCB4 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Vps53Q8CCB4 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Vps53Q8CCB4 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Vps53Q8CCB4 Olfr995-202ENSMUST00000216933 1706 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Vps53Q8CCB4 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Vps53Q8CCB4 Gm38374-201ENSMUST00000194417 2033 ntBASIC5.36□□□□□ -1.55
Vps53Q8CCB4 Gm36951-201ENSMUST00000193840 2687 ntBASIC5.36□□□□□ -1.55
Vps53Q8CCB4 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Vps53Q8CCB4 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC5.36□□□□□ -1.55
Vps53Q8CCB4 Gm42559-201ENSMUST00000201811 3532 ntBASIC5.36□□□□□ -1.55
Vps53Q8CCB4 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Vps53Q8CCB4 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Vps53Q8CCB4 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Vps53Q8CCB4 Gm13733-201ENSMUST00000117290 535 ntBASIC5.36□□□□□ -1.55
Vps53Q8CCB4 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Vps53Q8CCB4 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC5.36□□□□□ -1.55
Vps53Q8CCB4 Gm12873-201ENSMUST00000119988 422 ntBASIC5.36□□□□□ -1.55
Vps53Q8CCB4 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC5.36□□□□□ -1.55
Vps53Q8CCB4 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC5.36□□□□□ -1.55
Vps53Q8CCB4 2610024D14Rik-201ENSMUST00000121233 294 ntBASIC5.36□□□□□ -1.55
Vps53Q8CCB4 Gm12639-201ENSMUST00000121400 493 ntBASIC5.36□□□□□ -1.55
Vps53Q8CCB4 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC5.36□□□□□ -1.55
Vps53Q8CCB4 Gm22601-201ENSMUST00000157595 250 ntBASIC5.36□□□□□ -1.55
Vps53Q8CCB4 Gm20657-201ENSMUST00000177079 515 ntBASIC5.36□□□□□ -1.55
Vps53Q8CCB4 Gm8221-201ENSMUST00000178052 564 ntBASIC5.36□□□□□ -1.55
Vps53Q8CCB4 Gm37727-201ENSMUST00000191637 819 ntBASIC5.36□□□□□ -1.55
Vps53Q8CCB4 Ighv1-41-201ENSMUST00000194414 329 ntBASIC5.36□□□□□ -1.55
Vps53Q8CCB4 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC5.36□□□□□ -1.55
Vps53Q8CCB4 Gm43151-201ENSMUST00000201093 657 ntTSL 3 BASIC5.36□□□□□ -1.55
Vps53Q8CCB4 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Vps53Q8CCB4 Gm44058-201ENSMUST00000204335 467 ntBASIC5.36□□□□□ -1.55
Vps53Q8CCB4 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC5.36□□□□□ -1.55
Vps53Q8CCB4 Olfr1498-ps1-201ENSMUST00000208721 991 ntBASIC5.36□□□□□ -1.55
Vps53Q8CCB4 AC152979.4-201ENSMUST00000219893 379 ntBASIC5.36□□□□□ -1.55
Vps53Q8CCB4 Gm35558-202ENSMUST00000221819 499 ntBASIC5.36□□□□□ -1.55
Vps53Q8CCB4 AC154816.2-201ENSMUST00000221918 372 ntTSL 5 BASIC5.36□□□□□ -1.55
Vps53Q8CCB4 Gm6988-201ENSMUST00000222676 375 ntBASIC5.36□□□□□ -1.55
Vps53Q8CCB4 AC154506.3-201ENSMUST00000225417 213 ntBASIC5.36□□□□□ -1.55
Vps53Q8CCB4 Ear-ps9-202ENSMUST00000226796 245 ntBASIC5.36□□□□□ -1.55
Vps53Q8CCB4 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Vps53Q8CCB4 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Vps53Q8CCB4 Gm23846-201ENSMUST00000083835 107 ntBASIC5.36□□□□□ -1.55
Vps53Q8CCB4 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Vps53Q8CCB4 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Vps53Q8CCB4 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Vps53Q8CCB4 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Vps53Q8CCB4 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Vps53Q8CCB4 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Vps53Q8CCB4 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC5.36□□□□□ -1.55
Vps53Q8CCB4 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Vps53Q8CCB4 Olfr1331-203ENSMUST00000216589 3139 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Vps53Q8CCB4 Gm43594-201ENSMUST00000201153 3442 ntBASIC5.36□□□□□ -1.55
Vps53Q8CCB4 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Vps53Q8CCB4 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Vps53Q8CCB4 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Vps53Q8CCB4 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
Vps53Q8CCB4 Gm2123-201ENSMUST00000221476 2836 ntBASIC5.35□□□□□ -1.55
Vps53Q8CCB4 Vmn2r17-201ENSMUST00000171841 2550 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Vps53Q8CCB4 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Vps53Q8CCB4 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC5.35□□□□□ -1.55
Vps53Q8CCB4 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Vps53Q8CCB4 Gm10330-201ENSMUST00000072014 1354 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Vps53Q8CCB4 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Vps53Q8CCB4 Gm11406-201ENSMUST00000117418 484 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms