Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 AC158807.1-201ENSMUST00000217959 187 ntBASIC5.81□□□□□ -1.48
Trim28Q62318 AC125020.2-201ENSMUST00000218894 348 ntBASIC5.81□□□□□ -1.48
Trim28Q62318 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC5.81□□□□□ -1.48
Trim28Q62318 AC154576.1-201ENSMUST00000225864 563 ntBASIC5.81□□□□□ -1.48
Trim28Q62318 AC107663.3-201ENSMUST00000225873 601 ntBASIC5.81□□□□□ -1.48
Trim28Q62318 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Trim28Q62318 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Trim28Q62318 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Trim28Q62318 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Trim28Q62318 Agbl1-201ENSMUST00000026854 3452 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
Trim28Q62318 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Trim28Q62318 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Trim28Q62318 Gm38057-201ENSMUST00000195551 3203 ntBASIC5.8□□□□□ -1.48
Trim28Q62318 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC5.8□□□□□ -1.48
Trim28Q62318 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC5.8□□□□□ -1.48
Trim28Q62318 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim28Q62318 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Trim28Q62318 Snord70-201ENSMUST00000104157 87 ntBASIC5.8□□□□□ -1.48
Trim28Q62318 Mir105-201ENSMUST00000104655 80 ntBASIC5.8□□□□□ -1.48
Trim28Q62318 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC5.8□□□□□ -1.48
Trim28Q62318 Gm5379-201ENSMUST00000120973 826 ntBASIC5.8□□□□□ -1.48
Trim28Q62318 Gm12103-201ENSMUST00000121892 362 ntBASIC5.8□□□□□ -1.48
Trim28Q62318 Gm15116-201ENSMUST00000122248 663 ntBASIC5.8□□□□□ -1.48
Trim28Q62318 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Trim28Q62318 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC5.8□□□□□ -1.48
Trim28Q62318 Gm22277-201ENSMUST00000157204 277 ntBASIC5.8□□□□□ -1.48
Trim28Q62318 Gm23228-201ENSMUST00000157296 270 ntBASIC5.8□□□□□ -1.48
Trim28Q62318 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Trim28Q62318 Gm23145-201ENSMUST00000178912 79 ntBASIC5.8□□□□□ -1.48
Trim28Q62318 Gm25120-201ENSMUST00000180148 79 ntBASIC5.8□□□□□ -1.48
Trim28Q62318 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Trim28Q62318 Gm6802-202ENSMUST00000186566 126 ntBASIC5.8□□□□□ -1.48
Trim28Q62318 Gm19777-201ENSMUST00000191940 358 ntBASIC5.8□□□□□ -1.48
Trim28Q62318 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC5.8□□□□□ -1.48
Trim28Q62318 Gm37399-201ENSMUST00000195224 416 ntBASIC5.8□□□□□ -1.48
Trim28Q62318 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC5.8□□□□□ -1.48
Trim28Q62318 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC5.8□□□□□ -1.48
Trim28Q62318 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC5.8□□□□□ -1.48
Trim28Q62318 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim28Q62318 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC5.8□□□□□ -1.48
Trim28Q62318 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim28Q62318 AC122508.1-201ENSMUST00000218365 233 ntTSL 5 BASIC5.8□□□□□ -1.48
Trim28Q62318 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Trim28Q62318 AC153794.2-201ENSMUST00000222650 550 ntBASIC5.8□□□□□ -1.48
Trim28Q62318 AC156803.1-201ENSMUST00000224407 820 ntBASIC5.8□□□□□ -1.48
Trim28Q62318 AC154305.1-201ENSMUST00000224443 450 ntBASIC5.8□□□□□ -1.48
Trim28Q62318 AC121114.1-201ENSMUST00000228522 570 ntBASIC5.8□□□□□ -1.48
Trim28Q62318 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Trim28Q62318 Olfr741-201ENSMUST00000071932 936 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Trim28Q62318 Olfr1408-201ENSMUST00000073663 1037 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Trim28Q62318 Olfr482-201ENSMUST00000081184 972 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Trim28Q62318 Gm23378-201ENSMUST00000082942 107 ntBASIC5.8□□□□□ -1.48
Trim28Q62318 Mir26a-2-201ENSMUST00000083496 84 ntBASIC5.8□□□□□ -1.48
Trim28Q62318 Gm25821-201ENSMUST00000093657 133 ntBASIC5.8□□□□□ -1.48
Trim28Q62318 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Trim28Q62318 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
Trim28Q62318 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim28Q62318 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim28Q62318 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Trim28Q62318 Gm42876-201ENSMUST00000196989 3215 ntBASIC5.8□□□□□ -1.48
Trim28Q62318 Vmn1r5-203ENSMUST00000228276 3188 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Trim28Q62318 Gm32444-201ENSMUST00000195147 3511 ntBASIC5.79□□□□□ -1.48
Trim28Q62318 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC5.79□□□□□ -1.48
Trim28Q62318 Gm23273-201ENSMUST00000104058 135 ntBASIC5.79□□□□□ -1.48
Trim28Q62318 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC5.79□□□□□ -1.48
Trim28Q62318 Gm9308-201ENSMUST00000119073 448 ntBASIC5.79□□□□□ -1.48
Trim28Q62318 Gm12638-201ENSMUST00000119531 298 ntBASIC5.79□□□□□ -1.48
Trim28Q62318 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC5.79□□□□□ -1.48
Trim28Q62318 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim28Q62318 Gm25427-201ENSMUST00000157605 103 ntBASIC5.79□□□□□ -1.48
Trim28Q62318 Gm5258-201ENSMUST00000165437 327 ntBASIC5.79□□□□□ -1.48
Trim28Q62318 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Trim28Q62318 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC5.79□□□□□ -1.48
Trim28Q62318 Gm27044-201ENSMUST00000183033 796 ntBASIC5.79□□□□□ -1.48
Trim28Q62318 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC5.79□□□□□ -1.48
Trim28Q62318 Mir6926-201ENSMUST00000184562 68 ntBASIC5.79□□□□□ -1.48
Trim28Q62318 Gm37050-201ENSMUST00000193464 466 ntBASIC5.79□□□□□ -1.48
Trim28Q62318 Gm37577-203ENSMUST00000194712 991 ntTSL 5 BASIC5.79□□□□□ -1.48
Trim28Q62318 AC133189.1-201ENSMUST00000198820 140 ntBASIC5.79□□□□□ -1.48
Trim28Q62318 Gm44088-201ENSMUST00000204595 237 ntBASIC5.79□□□□□ -1.48
Trim28Q62318 Gm44002-201ENSMUST00000205134 594 ntBASIC5.79□□□□□ -1.48
Trim28Q62318 Gm45344-201ENSMUST00000211610 341 ntBASIC5.79□□□□□ -1.48
Trim28Q62318 AC121844.1-201ENSMUST00000218706 137 ntBASIC5.79□□□□□ -1.48
Trim28Q62318 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC5.79□□□□□ -1.48
Trim28Q62318 CT030705.1-201ENSMUST00000223971 533 ntBASIC5.79□□□□□ -1.48
Trim28Q62318 AC167669.3-201ENSMUST00000224720 393 ntBASIC5.79□□□□□ -1.48
Trim28Q62318 AL606513.1-201ENSMUST00000225369 579 ntBASIC5.79□□□□□ -1.48
Trim28Q62318 AC154738.4-201ENSMUST00000228310 414 ntBASIC5.79□□□□□ -1.48
Trim28Q62318 Olfr629-201ENSMUST00000051346 1122 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Trim28Q62318 Mir383-201ENSMUST00000083523 70 ntBASIC5.79□□□□□ -1.48
Trim28Q62318 Mir346-201ENSMUST00000083547 98 ntBASIC5.79□□□□□ -1.48
Trim28Q62318 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Trim28Q62318 Gm20679-201ENSMUST00000177285 1402 ntBASIC5.79□□□□□ -1.48
Trim28Q62318 Gm26655-203ENSMUST00000181095 2078 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim28Q62318 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim28Q62318 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim28Q62318 Gm26650-204ENSMUST00000181881 2078 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim28Q62318 AC174797.3-203ENSMUST00000225749 2078 ntBASIC5.79□□□□□ -1.48
Trim28Q62318 Gm14415-201ENSMUST00000118260 1578 ntBASIC5.79□□□□□ -1.48
Trim28Q62318 AC129085.3-201ENSMUST00000225686 1705 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms