Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Trav5d-4Q5R1F6 Gm28655-201ENSMUST00000191538 692 ntBASIC3.26□□□□□ -1.89
Trav5d-4Q5R1F6 Gm38332-201ENSMUST00000194189 147 ntBASIC3.26□□□□□ -1.89
Trav5d-4Q5R1F6 Gm43604-201ENSMUST00000199799 705 ntBASIC3.26□□□□□ -1.89
Trav5d-4Q5R1F6 Gm6240-201ENSMUST00000208014 473 ntBASIC3.26□□□□□ -1.89
Trav5d-4Q5R1F6 Gm44681-201ENSMUST00000208447 842 ntBASIC3.26□□□□□ -1.89
Trav5d-4Q5R1F6 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC3.26□□□□□ -1.89
Trav5d-4Q5R1F6 AC160134.1-201ENSMUST00000213450 551 ntBASIC3.26□□□□□ -1.89
Trav5d-4Q5R1F6 Gm3213-201ENSMUST00000219296 441 ntBASIC3.26□□□□□ -1.89
Trav5d-4Q5R1F6 CT009765.2-201ENSMUST00000221331 392 ntBASIC3.26□□□□□ -1.89
Trav5d-4Q5R1F6 CT030242.2-201ENSMUST00000221588 148 ntBASIC3.26□□□□□ -1.89
Trav5d-4Q5R1F6 E330017A01Rik-201ENSMUST00000053249 1108 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Trav5d-4Q5R1F6 Olfr884-201ENSMUST00000077732 930 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Trav5d-4Q5R1F6 Gm26449-201ENSMUST00000082452 104 ntBASIC3.26□□□□□ -1.89
Trav5d-4Q5R1F6 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
Trav5d-4Q5R1F6 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Trav5d-4Q5R1F6 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Trav5d-4Q5R1F6 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC3.25□□□□□ -1.89
Trav5d-4Q5R1F6 Gm44078-201ENSMUST00000204652 2646 ntBASIC3.25□□□□□ -1.89
Trav5d-4Q5R1F6 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC3.25□□□□□ -1.89
Trav5d-4Q5R1F6 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Trav5d-4Q5R1F6 Gm42993-201ENSMUST00000196856 7325 ntBASIC3.25□□□□□ -1.89
Trav5d-4Q5R1F6 Gm43793-201ENSMUST00000201645 1333 ntBASIC3.25□□□□□ -1.89
Trav5d-4Q5R1F6 AC163296.2-201ENSMUST00000220177 1315 ntBASIC3.25□□□□□ -1.89
Trav5d-4Q5R1F6 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Trav5d-4Q5R1F6 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Trav5d-4Q5R1F6 Gm37006-201ENSMUST00000195253 2674 ntBASIC3.25□□□□□ -1.89
Trav5d-4Q5R1F6 A230085B16Rik-201ENSMUST00000209781 1856 ntBASIC3.25□□□□□ -1.89
Trav5d-4Q5R1F6 Gm22269-201ENSMUST00000104002 130 ntBASIC3.25□□□□□ -1.89
Trav5d-4Q5R1F6 Gm14282-201ENSMUST00000119484 240 ntBASIC3.25□□□□□ -1.89
Trav5d-4Q5R1F6 Gm14229-201ENSMUST00000121178 850 ntBASIC3.25□□□□□ -1.89
Trav5d-4Q5R1F6 Gm25843-201ENSMUST00000122582 314 ntBASIC3.25□□□□□ -1.89
Trav5d-4Q5R1F6 Gm22988-201ENSMUST00000122759 144 ntBASIC3.25□□□□□ -1.89
Trav5d-4Q5R1F6 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC3.25□□□□□ -1.89
Trav5d-4Q5R1F6 Gm23228-201ENSMUST00000157296 270 ntBASIC3.25□□□□□ -1.89
Trav5d-4Q5R1F6 Gm25436-201ENSMUST00000158275 145 ntBASIC3.25□□□□□ -1.89
Trav5d-4Q5R1F6 Gm22889-201ENSMUST00000158639 58 ntBASIC3.25□□□□□ -1.89
Trav5d-4Q5R1F6 Gm24976-201ENSMUST00000158972 135 ntBASIC3.25□□□□□ -1.89
Trav5d-4Q5R1F6 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC3.25□□□□□ -1.89
Trav5d-4Q5R1F6 Gm22254-201ENSMUST00000179186 110 ntBASIC3.25□□□□□ -1.89
Trav5d-4Q5R1F6 Gm3259-205ENSMUST00000185432 1077 ntTSL 3 BASIC3.25□□□□□ -1.89
Trav5d-4Q5R1F6 Gm2617-201ENSMUST00000185690 1066 ntBASIC3.25□□□□□ -1.89
Trav5d-4Q5R1F6 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC3.25□□□□□ -1.89
Trav5d-4Q5R1F6 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Trav5d-4Q5R1F6 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC3.25□□□□□ -1.89
Trav5d-4Q5R1F6 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Trav5d-4Q5R1F6 Gm44099-201ENSMUST00000203299 112 ntBASIC3.25□□□□□ -1.89
Trav5d-4Q5R1F6 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC3.25□□□□□ -1.89
Trav5d-4Q5R1F6 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC3.25□□□□□ -1.89
Trav5d-4Q5R1F6 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC3.25□□□□□ -1.89
Trav5d-4Q5R1F6 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
Trav5d-4Q5R1F6 AC100590.2-201ENSMUST00000219028 215 ntBASIC3.25□□□□□ -1.89
Trav5d-4Q5R1F6 Gm46369-201ENSMUST00000221577 401 ntBASIC3.25□□□□□ -1.89
Trav5d-4Q5R1F6 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC3.25□□□□□ -1.89
Trav5d-4Q5R1F6 AC154742.1-201ENSMUST00000223477 573 ntTSL 5 BASIC3.25□□□□□ -1.89
Trav5d-4Q5R1F6 CT030662.3-201ENSMUST00000228751 476 ntBASIC3.25□□□□□ -1.89
Trav5d-4Q5R1F6 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Trav5d-4Q5R1F6 Olfr1457-203ENSMUST00000214561 1829 ntTSL 5 BASIC3.25□□□□□ -1.89
Trav5d-4Q5R1F6 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Trav5d-4Q5R1F6 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
Trav5d-4Q5R1F6 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Trav5d-4Q5R1F6 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC3.25□□□□□ -1.89
Trav5d-4Q5R1F6 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC3.25□□□□□ -1.89
Trav5d-4Q5R1F6 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Trav5d-4Q5R1F6 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Trav5d-4Q5R1F6 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Trav5d-4Q5R1F6 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC3.24□□□□□ -1.89
Trav5d-4Q5R1F6 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
Trav5d-4Q5R1F6 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC3.24□□□□□ -1.89
Trav5d-4Q5R1F6 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Trav5d-4Q5R1F6 Gm45033-201ENSMUST00000206710 3167 ntBASIC3.24□□□□□ -1.89
Trav5d-4Q5R1F6 Gm18493-201ENSMUST00000192084 1612 ntBASIC3.24□□□□□ -1.89
Trav5d-4Q5R1F6 Gm38073-201ENSMUST00000195141 3665 ntBASIC3.24□□□□□ -1.89
Trav5d-4Q5R1F6 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Trav5d-4Q5R1F6 Snord66-201ENSMUST00000104051 75 ntBASIC3.24□□□□□ -1.89
Trav5d-4Q5R1F6 Gm14299-201ENSMUST00000117586 397 ntBASIC3.24□□□□□ -1.89
Trav5d-4Q5R1F6 Gm13607-201ENSMUST00000117875 539 ntBASIC3.24□□□□□ -1.89
Trav5d-4Q5R1F6 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC3.24□□□□□ -1.89
Trav5d-4Q5R1F6 Gm13567-201ENSMUST00000118026 247 ntBASIC3.24□□□□□ -1.89
Trav5d-4Q5R1F6 Gm11923-201ENSMUST00000118135 508 ntBASIC3.24□□□□□ -1.89
Trav5d-4Q5R1F6 Gm11623-201ENSMUST00000120176 1225 ntBASIC3.24□□□□□ -1.89
Trav5d-4Q5R1F6 Gm11692-201ENSMUST00000122121 902 ntBASIC3.24□□□□□ -1.89
Trav5d-4Q5R1F6 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Trav5d-4Q5R1F6 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC3.24□□□□□ -1.89
Trav5d-4Q5R1F6 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC3.24□□□□□ -1.89
Trav5d-4Q5R1F6 Gm26148-201ENSMUST00000157430 68 ntBASIC3.24□□□□□ -1.89
Trav5d-4Q5R1F6 Gm24550-201ENSMUST00000158648 279 ntBASIC3.24□□□□□ -1.89
Trav5d-4Q5R1F6 Vmn2r-ps121-201ENSMUST00000176230 802 ntBASIC3.24□□□□□ -1.89
Trav5d-4Q5R1F6 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Trav5d-4Q5R1F6 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Trav5d-4Q5R1F6 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC3.24□□□□□ -1.89
Trav5d-4Q5R1F6 Gm28872-201ENSMUST00000191518 158 ntBASIC3.24□□□□□ -1.89
Trav5d-4Q5R1F6 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC3.24□□□□□ -1.89
Trav5d-4Q5R1F6 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC3.24□□□□□ -1.89
Trav5d-4Q5R1F6 Gm18861-201ENSMUST00000202509 1186 ntBASIC3.24□□□□□ -1.89
Trav5d-4Q5R1F6 Gm43155-201ENSMUST00000202661 494 ntBASIC3.24□□□□□ -1.89
Trav5d-4Q5R1F6 Gm44059-201ENSMUST00000204048 351 ntBASIC3.24□□□□□ -1.89
Trav5d-4Q5R1F6 Gm45031-201ENSMUST00000206800 288 ntBASIC3.24□□□□□ -1.89
Trav5d-4Q5R1F6 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC3.24□□□□□ -1.89
Trav5d-4Q5R1F6 Olfr1295-202ENSMUST00000207786 1043 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms