Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Upf3bQ3ULL6 Gm11393-201ENSMUST00000118019 288 ntBASIC4.1□□□□□ -1.75
Upf3bQ3ULL6 Gm15377-201ENSMUST00000119594 246 ntBASIC4.1□□□□□ -1.75
Upf3bQ3ULL6 Gm12577-201ENSMUST00000119701 574 ntBASIC4.1□□□□□ -1.75
Upf3bQ3ULL6 Gm12900-201ENSMUST00000120919 573 ntBASIC4.1□□□□□ -1.75
Upf3bQ3ULL6 Gm22226-201ENSMUST00000157355 109 ntBASIC4.1□□□□□ -1.75
Upf3bQ3ULL6 Gm23098-201ENSMUST00000157552 299 ntBASIC4.1□□□□□ -1.75
Upf3bQ3ULL6 Gm16290-201ENSMUST00000161175 474 ntBASIC4.1□□□□□ -1.75
Upf3bQ3ULL6 Serpina3l-ps-201ENSMUST00000163975 1264 ntBASIC4.1□□□□□ -1.75
Upf3bQ3ULL6 Gm22120-201ENSMUST00000175590 70 ntBASIC4.1□□□□□ -1.75
Upf3bQ3ULL6 Vmn2r-ps121-201ENSMUST00000176230 802 ntBASIC4.1□□□□□ -1.75
Upf3bQ3ULL6 Gm26556-201ENSMUST00000180645 320 ntBASIC4.1□□□□□ -1.75
Upf3bQ3ULL6 Gm10292-201ENSMUST00000183142 581 ntBASIC4.1□□□□□ -1.75
Upf3bQ3ULL6 Gm17777-201ENSMUST00000189740 1276 ntBASIC4.1□□□□□ -1.75
Upf3bQ3ULL6 Gm36997-201ENSMUST00000195090 707 ntBASIC4.1□□□□□ -1.75
Upf3bQ3ULL6 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC4.1□□□□□ -1.75
Upf3bQ3ULL6 Gm42453-201ENSMUST00000200477 409 ntBASIC4.1□□□□□ -1.75
Upf3bQ3ULL6 Gm44773-201ENSMUST00000207374 557 ntBASIC4.1□□□□□ -1.75
Upf3bQ3ULL6 1700042O05Rik-201ENSMUST00000219017 584 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Upf3bQ3ULL6 AC129308.2-201ENSMUST00000224588 789 ntBASIC4.1□□□□□ -1.75
Upf3bQ3ULL6 AC074315.1-201ENSMUST00000228801 214 ntBASIC4.1□□□□□ -1.75
Upf3bQ3ULL6 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Upf3bQ3ULL6 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Upf3bQ3ULL6 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Upf3bQ3ULL6 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
Upf3bQ3ULL6 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Upf3bQ3ULL6 Gm10287-202ENSMUST00000180599 4059 ntBASIC4.09□□□□□ -1.75
Upf3bQ3ULL6 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Upf3bQ3ULL6 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Upf3bQ3ULL6 Gm43662-201ENSMUST00000198310 2271 ntBASIC4.09□□□□□ -1.75
Upf3bQ3ULL6 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Upf3bQ3ULL6 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC4.09□□□□□ -1.75
Upf3bQ3ULL6 Gm7363-201ENSMUST00000119883 399 ntBASIC4.09□□□□□ -1.75
Upf3bQ3ULL6 Gm11982-201ENSMUST00000121480 314 ntBASIC4.09□□□□□ -1.75
Upf3bQ3ULL6 Gm26476-201ENSMUST00000122618 313 ntBASIC4.09□□□□□ -1.75
Upf3bQ3ULL6 Gm22986-201ENSMUST00000122753 130 ntBASIC4.09□□□□□ -1.75
Upf3bQ3ULL6 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Upf3bQ3ULL6 Gm23441-201ENSMUST00000157268 127 ntBASIC4.09□□□□□ -1.75
Upf3bQ3ULL6 Gm23365-201ENSMUST00000175019 125 ntBASIC4.09□□□□□ -1.75
Upf3bQ3ULL6 Gm25960-201ENSMUST00000175110 125 ntBASIC4.09□□□□□ -1.75
Upf3bQ3ULL6 Gm44453-201ENSMUST00000175161 126 ntBASIC4.09□□□□□ -1.75
Upf3bQ3ULL6 Gm25195-201ENSMUST00000177656 126 ntBASIC4.09□□□□□ -1.75
Upf3bQ3ULL6 Gm8641-201ENSMUST00000186995 826 ntBASIC4.09□□□□□ -1.75
Upf3bQ3ULL6 Gm3496-201ENSMUST00000188283 745 ntBASIC4.09□□□□□ -1.75
Upf3bQ3ULL6 Gm37830-201ENSMUST00000195282 837 ntTSL 5 BASIC4.09□□□□□ -1.75
Upf3bQ3ULL6 Mir129b-201ENSMUST00000197461 65 ntBASIC4.09□□□□□ -1.75
Upf3bQ3ULL6 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC4.09□□□□□ -1.75
Upf3bQ3ULL6 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Upf3bQ3ULL6 AL645546.1-201ENSMUST00000225001 189 ntBASIC4.09□□□□□ -1.75
Upf3bQ3ULL6 AC156790.5-201ENSMUST00000227075 231 ntBASIC4.09□□□□□ -1.75
Upf3bQ3ULL6 Creg1-201ENSMUST00000040298 425 ntTSL 3 BASIC4.09□□□□□ -1.75
Upf3bQ3ULL6 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Upf3bQ3ULL6 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC4.09□□□□□ -1.75
Upf3bQ3ULL6 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Upf3bQ3ULL6 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
Upf3bQ3ULL6 AC101945.4-201ENSMUST00000228464 1976 ntBASIC4.09□□□□□ -1.76
Upf3bQ3ULL6 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
Upf3bQ3ULL6 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC4.09□□□□□ -1.76
Upf3bQ3ULL6 Gm3665-201ENSMUST00000177214 2461 ntBASIC4.09□□□□□ -1.76
Upf3bQ3ULL6 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC4.09□□□□□ -1.76
Upf3bQ3ULL6 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
Upf3bQ3ULL6 Gm25537-201ENSMUST00000103851 109 ntBASIC4.08□□□□□ -1.76
Upf3bQ3ULL6 Gm25765-201ENSMUST00000104100 132 ntBASIC4.08□□□□□ -1.76
Upf3bQ3ULL6 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Upf3bQ3ULL6 Gm22676-201ENSMUST00000116972 129 ntBASIC4.08□□□□□ -1.76
Upf3bQ3ULL6 Gm13607-201ENSMUST00000117875 539 ntBASIC4.08□□□□□ -1.76
Upf3bQ3ULL6 Cyp2j7-ps3-201ENSMUST00000121405 206 ntBASIC4.08□□□□□ -1.76
Upf3bQ3ULL6 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Upf3bQ3ULL6 Gm23231-201ENSMUST00000157299 104 ntBASIC4.08□□□□□ -1.76
Upf3bQ3ULL6 Gm24550-201ENSMUST00000158648 279 ntBASIC4.08□□□□□ -1.76
Upf3bQ3ULL6 Gm26028-201ENSMUST00000158660 294 ntBASIC4.08□□□□□ -1.76
Upf3bQ3ULL6 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC4.08□□□□□ -1.76
Upf3bQ3ULL6 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC4.08□□□□□ -1.76
Upf3bQ3ULL6 Gm29320-201ENSMUST00000185235 615 ntBASIC4.08□□□□□ -1.76
Upf3bQ3ULL6 Gm29179-202ENSMUST00000186138 615 ntBASIC4.08□□□□□ -1.76
Upf3bQ3ULL6 Gm29448-201ENSMUST00000186675 615 ntBASIC4.08□□□□□ -1.76
Upf3bQ3ULL6 Gm29314-201ENSMUST00000186800 615 ntBASIC4.08□□□□□ -1.76
Upf3bQ3ULL6 Gm28253-202ENSMUST00000187971 615 ntBASIC4.08□□□□□ -1.76
Upf3bQ3ULL6 Gm29169-201ENSMUST00000189835 615 ntBASIC4.08□□□□□ -1.76
Upf3bQ3ULL6 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC4.08□□□□□ -1.76
Upf3bQ3ULL6 Gm9722-201ENSMUST00000194568 802 ntBASIC4.08□□□□□ -1.76
Upf3bQ3ULL6 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC4.08□□□□□ -1.76
Upf3bQ3ULL6 Mir7682-201ENSMUST00000198467 58 ntBASIC4.08□□□□□ -1.76
Upf3bQ3ULL6 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC4.08□□□□□ -1.76
Upf3bQ3ULL6 Gm20074-201ENSMUST00000208144 484 ntBASIC4.08□□□□□ -1.76
Upf3bQ3ULL6 Gm45796-201ENSMUST00000212483 114 ntBASIC4.08□□□□□ -1.76
Upf3bQ3ULL6 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Upf3bQ3ULL6 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC4.08□□□□□ -1.76
Upf3bQ3ULL6 Pah-204ENSMUST00000219813 789 ntTSL 3 BASIC4.08□□□□□ -1.76
Upf3bQ3ULL6 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Upf3bQ3ULL6 CT030705.1-201ENSMUST00000223971 533 ntBASIC4.08□□□□□ -1.76
Upf3bQ3ULL6 CU024892.1-201ENSMUST00000224869 515 ntBASIC4.08□□□□□ -1.76
Upf3bQ3ULL6 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
Upf3bQ3ULL6 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Upf3bQ3ULL6 Gm25800-201ENSMUST00000082636 134 ntBASIC4.08□□□□□ -1.76
Upf3bQ3ULL6 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Upf3bQ3ULL6 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Upf3bQ3ULL6 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
Upf3bQ3ULL6 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Upf3bQ3ULL6 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 94.9 ms