Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Upf3aQ3ULJ3 AC152162.1-201ENSMUST00000225910 2917 ntBASIC4.16□□□□□ -1.74
Upf3aQ3ULJ3 Gm5590-202ENSMUST00000186976 2315 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Upf3aQ3ULJ3 Gm37195-201ENSMUST00000192006 3018 ntBASIC4.16□□□□□ -1.74
Upf3aQ3ULJ3 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Upf3aQ3ULJ3 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Upf3aQ3ULJ3 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC4.16□□□□□ -1.74
Upf3aQ3ULJ3 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC4.16□□□□□ -1.74
Upf3aQ3ULJ3 Gm22840-201ENSMUST00000158444 136 ntBASIC4.16□□□□□ -1.74
Upf3aQ3ULJ3 Mir7676-1-201ENSMUST00000183491 62 ntBASIC4.16□□□□□ -1.74
Upf3aQ3ULJ3 Mir7676-2-201ENSMUST00000183523 62 ntBASIC4.16□□□□□ -1.74
Upf3aQ3ULJ3 1700054K19Rik-201ENSMUST00000186102 452 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Upf3aQ3ULJ3 Gm8023-201ENSMUST00000195298 903 ntBASIC4.16□□□□□ -1.74
Upf3aQ3ULJ3 Gm43039-201ENSMUST00000202883 963 ntBASIC4.16□□□□□ -1.74
Upf3aQ3ULJ3 AC154441.1-201ENSMUST00000223653 1006 ntBASIC4.16□□□□□ -1.74
Upf3aQ3ULJ3 AC115291.2-201ENSMUST00000228335 437 ntBASIC4.16□□□□□ -1.74
Upf3aQ3ULJ3 Olfr1176-201ENSMUST00000057439 949 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Upf3aQ3ULJ3 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Upf3aQ3ULJ3 Mir193a-201ENSMUST00000083461 66 ntBASIC4.16□□□□□ -1.74
Upf3aQ3ULJ3 Bcl2a1a-201ENSMUST00000098485 819 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Upf3aQ3ULJ3 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC4.16□□□□□ -1.74
Upf3aQ3ULJ3 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Upf3aQ3ULJ3 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Upf3aQ3ULJ3 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Upf3aQ3ULJ3 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Upf3aQ3ULJ3 AC155921.1-201ENSMUST00000216568 3841 ntBASIC4.16□□□□□ -1.74
Upf3aQ3ULJ3 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Upf3aQ3ULJ3 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.74
Upf3aQ3ULJ3 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
Upf3aQ3ULJ3 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC4.15□□□□□ -1.74
Upf3aQ3ULJ3 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
Upf3aQ3ULJ3 Gm37655-201ENSMUST00000193968 4123 ntBASIC4.15□□□□□ -1.74
Upf3aQ3ULJ3 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.74
Upf3aQ3ULJ3 Gm42680-201ENSMUST00000196238 2500 ntBASIC4.15□□□□□ -1.74
Upf3aQ3ULJ3 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
Upf3aQ3ULJ3 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Upf3aQ3ULJ3 Gm24608-201ENSMUST00000104381 136 ntBASIC4.15□□□□□ -1.75
Upf3aQ3ULJ3 Gm24987-201ENSMUST00000104453 134 ntBASIC4.15□□□□□ -1.75
Upf3aQ3ULJ3 Gm15018-201ENSMUST00000117090 633 ntBASIC4.15□□□□□ -1.75
Upf3aQ3ULJ3 Gm11566-201ENSMUST00000118550 203 ntBASIC4.15□□□□□ -1.75
Upf3aQ3ULJ3 Gm14586-201ENSMUST00000119571 408 ntBASIC4.15□□□□□ -1.75
Upf3aQ3ULJ3 n-R5s45-201ENSMUST00000122592 110 ntBASIC4.15□□□□□ -1.75
Upf3aQ3ULJ3 n-R5s68-201ENSMUST00000122639 82 ntBASIC4.15□□□□□ -1.75
Upf3aQ3ULJ3 Gm25667-201ENSMUST00000157701 275 ntBASIC4.15□□□□□ -1.75
Upf3aQ3ULJ3 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Upf3aQ3ULJ3 Gm10074-201ENSMUST00000174543 249 ntBASIC4.15□□□□□ -1.75
Upf3aQ3ULJ3 Gm8677-201ENSMUST00000174637 924 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Upf3aQ3ULJ3 Gm26746-201ENSMUST00000181722 487 ntBASIC4.15□□□□□ -1.75
Upf3aQ3ULJ3 Gm29588-201ENSMUST00000185738 298 ntBASIC4.15□□□□□ -1.75
Upf3aQ3ULJ3 Gm28190-201ENSMUST00000189766 722 ntBASIC4.15□□□□□ -1.75
Upf3aQ3ULJ3 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Upf3aQ3ULJ3 Gm43941-201ENSMUST00000203303 1073 ntBASIC4.15□□□□□ -1.75
Upf3aQ3ULJ3 AC159819.1-201ENSMUST00000213911 328 ntBASIC4.15□□□□□ -1.75
Upf3aQ3ULJ3 Olfr790-204ENSMUST00000218901 1070 ntBASIC4.15□□□□□ -1.75
Upf3aQ3ULJ3 Olfr790-201ENSMUST00000056002 1070 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Upf3aQ3ULJ3 Olfr1351-201ENSMUST00000080730 960 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Upf3aQ3ULJ3 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Upf3aQ3ULJ3 Gm44678-201ENSMUST00000207828 2775 ntBASIC4.15□□□□□ -1.75
Upf3aQ3ULJ3 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Upf3aQ3ULJ3 Gm37899-201ENSMUST00000193116 8717 ntBASIC4.15□□□□□ -1.75
Upf3aQ3ULJ3 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
Upf3aQ3ULJ3 Gm44435-201ENSMUST00000204379 4119 ntBASIC4.15□□□□□ -1.75
Upf3aQ3ULJ3 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
Upf3aQ3ULJ3 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Upf3aQ3ULJ3 Gm43658-201ENSMUST00000202348 4176 ntBASIC4.14□□□□□ -1.75
Upf3aQ3ULJ3 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC4.14□□□□□ -1.75
Upf3aQ3ULJ3 AC153969.1-201ENSMUST00000214047 2605 ntBASIC4.14□□□□□ -1.75
Upf3aQ3ULJ3 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
Upf3aQ3ULJ3 Gm42552-201ENSMUST00000196754 4497 ntBASIC4.14□□□□□ -1.75
Upf3aQ3ULJ3 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC4.14□□□□□ -1.75
Upf3aQ3ULJ3 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
Upf3aQ3ULJ3 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC4.14□□□□□ -1.75
Upf3aQ3ULJ3 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Upf3aQ3ULJ3 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Upf3aQ3ULJ3 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Upf3aQ3ULJ3 Gm15988-201ENSMUST00000118677 367 ntBASIC4.14□□□□□ -1.75
Upf3aQ3ULJ3 Gm11262-201ENSMUST00000119326 833 ntBASIC4.14□□□□□ -1.75
Upf3aQ3ULJ3 Mup-ps20-201ENSMUST00000121132 389 ntBASIC4.14□□□□□ -1.75
Upf3aQ3ULJ3 Gm24314-201ENSMUST00000158274 123 ntBASIC4.14□□□□□ -1.75
Upf3aQ3ULJ3 Gm25037-201ENSMUST00000175418 110 ntBASIC4.14□□□□□ -1.75
Upf3aQ3ULJ3 Vmn2r-ps121-201ENSMUST00000176230 802 ntBASIC4.14□□□□□ -1.75
Upf3aQ3ULJ3 Gm6625-201ENSMUST00000177870 272 ntBASIC4.14□□□□□ -1.75
Upf3aQ3ULJ3 Gm19637-201ENSMUST00000185933 579 ntBASIC4.14□□□□□ -1.75
Upf3aQ3ULJ3 Gm37343-201ENSMUST00000192542 111 ntBASIC4.14□□□□□ -1.75
Upf3aQ3ULJ3 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC4.14□□□□□ -1.75
Upf3aQ3ULJ3 Gm42539-201ENSMUST00000197009 308 ntBASIC4.14□□□□□ -1.75
Upf3aQ3ULJ3 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC4.14□□□□□ -1.75
Upf3aQ3ULJ3 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC4.14□□□□□ -1.75
Upf3aQ3ULJ3 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC4.14□□□□□ -1.75
Upf3aQ3ULJ3 Gm20946-201ENSMUST00000212367 461 ntBASIC4.14□□□□□ -1.75
Upf3aQ3ULJ3 Olfr936-202ENSMUST00000216912 937 ntBASIC4.14□□□□□ -1.75
Upf3aQ3ULJ3 Gm18116-201ENSMUST00000220920 537 ntBASIC4.14□□□□□ -1.75
Upf3aQ3ULJ3 AC173345.3-201ENSMUST00000221245 1093 ntBASIC4.14□□□□□ -1.75
Upf3aQ3ULJ3 Gm4057-201ENSMUST00000221407 368 ntBASIC4.14□□□□□ -1.75
Upf3aQ3ULJ3 AC125379.1-201ENSMUST00000221928 111 ntBASIC4.14□□□□□ -1.75
Upf3aQ3ULJ3 CT009713.4-201ENSMUST00000224246 272 ntBASIC4.14□□□□□ -1.75
Upf3aQ3ULJ3 AC155167.1-201ENSMUST00000228931 614 ntBASIC4.14□□□□□ -1.75
Upf3aQ3ULJ3 Gm12582-201ENSMUST00000030555 697 ntBASIC4.14□□□□□ -1.75
Upf3aQ3ULJ3 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Upf3aQ3ULJ3 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms