Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gm25410-201ENSMUST00000083758 137 ntBASIC5.96□□□□□ -1.46
Col6a1Q04857 Gm22826-201ENSMUST00000083774 165 ntBASIC5.96□□□□□ -1.46
Col6a1Q04857 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Col6a1Q04857 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC5.96□□□□□ -1.46
Col6a1Q04857 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Col6a1Q04857 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Col6a1Q04857 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
Col6a1Q04857 Gm15170-201ENSMUST00000121593 2023 ntBASIC5.96□□□□□ -1.46
Col6a1Q04857 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Col6a1Q04857 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Col6a1Q04857 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Col6a1Q04857 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Col6a1Q04857 Olfr690-203ENSMUST00000216230 2085 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Col6a1Q04857 Gm37903-201ENSMUST00000192122 2381 ntBASIC5.95□□□□□ -1.46
Col6a1Q04857 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
Col6a1Q04857 Gm37551-201ENSMUST00000195556 2861 ntBASIC5.95□□□□□ -1.46
Col6a1Q04857 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC5.95□□□□□ -1.46
Col6a1Q04857 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC5.95□□□□□ -1.46
Col6a1Q04857 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC5.95□□□□□ -1.46
Col6a1Q04857 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Col6a1Q04857 Gm11561-201ENSMUST00000117429 417 ntBASIC5.95□□□□□ -1.46
Col6a1Q04857 Gm14987-201ENSMUST00000117820 676 ntBASIC5.95□□□□□ -1.46
Col6a1Q04857 Gm6884-201ENSMUST00000119318 615 ntBASIC5.95□□□□□ -1.46
Col6a1Q04857 Gm11363-201ENSMUST00000121672 548 ntBASIC5.95□□□□□ -1.46
Col6a1Q04857 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC5.95□□□□□ -1.46
Col6a1Q04857 Gm25427-201ENSMUST00000157605 103 ntBASIC5.95□□□□□ -1.46
Col6a1Q04857 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Col6a1Q04857 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Col6a1Q04857 Gm4134-201ENSMUST00000173244 563 ntBASIC5.95□□□□□ -1.46
Col6a1Q04857 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Col6a1Q04857 Gm25873-201ENSMUST00000180317 107 ntBASIC5.95□□□□□ -1.46
Col6a1Q04857 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC5.95□□□□□ -1.46
Col6a1Q04857 Gm38185-201ENSMUST00000193195 694 ntBASIC5.95□□□□□ -1.46
Col6a1Q04857 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Col6a1Q04857 Gm19147-201ENSMUST00000199622 652 ntBASIC5.95□□□□□ -1.46
Col6a1Q04857 Gm44580-201ENSMUST00000206333 877 ntBASIC5.95□□□□□ -1.46
Col6a1Q04857 Gm29785-201ENSMUST00000217033 383 ntBASIC5.95□□□□□ -1.46
Col6a1Q04857 CT030705.1-201ENSMUST00000223971 533 ntBASIC5.95□□□□□ -1.46
Col6a1Q04857 CT956049.1-201ENSMUST00000225671 763 ntBASIC5.95□□□□□ -1.46
Col6a1Q04857 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
Col6a1Q04857 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Col6a1Q04857 Olfr739-201ENSMUST00000075261 930 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Col6a1Q04857 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Col6a1Q04857 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Col6a1Q04857 AC122382.2-201ENSMUST00000225128 3602 ntBASIC5.95□□□□□ -1.46
Col6a1Q04857 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Col6a1Q04857 Olfr1026-202ENSMUST00000217615 1538 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Col6a1Q04857 Olfr1382-203ENSMUST00000213707 4294 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Col6a1Q04857 Olfr1382-204ENSMUST00000213899 4285 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Col6a1Q04857 Olfr1382-205ENSMUST00000217564 4287 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Col6a1Q04857 Gm43361-201ENSMUST00000196562 4690 ntBASIC5.94□□□□□ -1.46
Col6a1Q04857 Olfr1087-202ENSMUST00000214141 3861 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Col6a1Q04857 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Col6a1Q04857 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Col6a1Q04857 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Col6a1Q04857 Olfr1224-ps1-204ENSMUST00000216833 2294 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Col6a1Q04857 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Col6a1Q04857 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC5.94□□□□□ -1.46
Col6a1Q04857 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Col6a1Q04857 Gm14909-201ENSMUST00000117853 351 ntBASIC5.94□□□□□ -1.46
Col6a1Q04857 Gm12448-201ENSMUST00000118852 655 ntBASIC5.94□□□□□ -1.46
Col6a1Q04857 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Col6a1Q04857 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC5.94□□□□□ -1.46
Col6a1Q04857 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC5.94□□□□□ -1.46
Col6a1Q04857 Mir3104-201ENSMUST00000174911 63 ntBASIC5.94□□□□□ -1.46
Col6a1Q04857 Mir5106-201ENSMUST00000174936 73 ntBASIC5.94□□□□□ -1.46
Col6a1Q04857 Gm22411-201ENSMUST00000175462 126 ntBASIC5.94□□□□□ -1.46
Col6a1Q04857 Gm22002-201ENSMUST00000175622 125 ntBASIC5.94□□□□□ -1.46
Col6a1Q04857 Gm24897-201ENSMUST00000179033 107 ntBASIC5.94□□□□□ -1.46
Col6a1Q04857 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC5.94□□□□□ -1.46
Col6a1Q04857 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC5.94□□□□□ -1.46
Col6a1Q04857 Gm28615-201ENSMUST00000187527 482 ntBASIC5.94□□□□□ -1.46
Col6a1Q04857 Gm5372-201ENSMUST00000187540 409 ntBASIC5.94□□□□□ -1.46
Col6a1Q04857 Gm29148-201ENSMUST00000188140 336 ntBASIC5.94□□□□□ -1.46
Col6a1Q04857 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC5.94□□□□□ -1.46
Col6a1Q04857 Gm5551-201ENSMUST00000199720 690 ntBASIC5.94□□□□□ -1.46
Col6a1Q04857 Gm6719-201ENSMUST00000202067 335 ntBASIC5.94□□□□□ -1.46
Col6a1Q04857 Gm44927-201ENSMUST00000207573 716 ntBASIC5.94□□□□□ -1.46
Col6a1Q04857 4930518J21Rik-201ENSMUST00000209557 573 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Col6a1Q04857 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC5.94□□□□□ -1.46
Col6a1Q04857 Gm10310-202ENSMUST00000213667 4661 ntAPPRIS P5 TSL 5 BASIC5.94□□□□□ -1.46
Col6a1Q04857 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC5.94□□□□□ -1.46
Col6a1Q04857 AC125543.1-201ENSMUST00000222778 101 ntBASIC5.94□□□□□ -1.46
Col6a1Q04857 AC165953.1-201ENSMUST00000226386 357 ntBASIC5.94□□□□□ -1.46
Col6a1Q04857 AC133101.1-201ENSMUST00000226939 1199 ntBASIC5.94□□□□□ -1.46
Col6a1Q04857 Gm22350-201ENSMUST00000083924 156 ntBASIC5.94□□□□□ -1.46
Col6a1Q04857 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Col6a1Q04857 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Col6a1Q04857 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Col6a1Q04857 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC5.94□□□□□ -1.46
Col6a1Q04857 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC5.94□□□□□ -1.46
Col6a1Q04857 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC5.94□□□□□ -1.46
Col6a1Q04857 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC5.94□□□□□ -1.46
Col6a1Q04857 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Col6a1Q04857 Gm43025-201ENSMUST00000201764 1886 ntBASIC5.94□□□□□ -1.46
Col6a1Q04857 Mpp5-201ENSMUST00000082024 5470 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Col6a1Q04857 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC5.93□□□□□ -1.46
Col6a1Q04857 Dnah3-204ENSMUST00000209154 12265 ntAPPRIS P5 TSL 5 BASIC5.93□□□□□ -1.46
Col6a1Q04857 P2ry12-203ENSMUST00000196583 2344 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Col6a1Q04857 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms