Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm24897-201ENSMUST00000179033 107 ntBASIC4.71□□□□□ -1.66
Col8a1Q00780 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC4.71□□□□□ -1.66
Col8a1Q00780 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC4.71□□□□□ -1.66
Col8a1Q00780 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC4.71□□□□□ -1.66
Col8a1Q00780 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC4.71□□□□□ -1.66
Col8a1Q00780 Gm14596-201ENSMUST00000180268 537 ntBASIC4.71□□□□□ -1.66
Col8a1Q00780 Gm14595-201ENSMUST00000180335 537 ntBASIC4.71□□□□□ -1.66
Col8a1Q00780 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Col8a1Q00780 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Col8a1Q00780 Gm27190-201ENSMUST00000184890 542 ntBASIC4.71□□□□□ -1.66
Col8a1Q00780 Scgb2b6-201ENSMUST00000188132 330 ntBASIC4.71□□□□□ -1.66
Col8a1Q00780 Gm37492-201ENSMUST00000191948 376 ntBASIC4.71□□□□□ -1.66
Col8a1Q00780 Gm38046-201ENSMUST00000192733 550 ntBASIC4.71□□□□□ -1.66
Col8a1Q00780 Gm8747-201ENSMUST00000195392 751 ntBASIC4.71□□□□□ -1.66
Col8a1Q00780 Igkv15-101-201ENSMUST00000195917 299 ntBASIC4.71□□□□□ -1.66
Col8a1Q00780 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC4.71□□□□□ -1.66
Col8a1Q00780 Gm36633-201ENSMUST00000205873 647 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Col8a1Q00780 Api5-ps-201ENSMUST00000206607 577 ntBASIC4.71□□□□□ -1.66
Col8a1Q00780 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC4.71□□□□□ -1.66
Col8a1Q00780 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC4.71□□□□□ -1.66
Col8a1Q00780 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC4.71□□□□□ -1.66
Col8a1Q00780 AC159896.3-201ENSMUST00000215904 3835 ntBASIC4.71□□□□□ -1.66
Col8a1Q00780 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC4.71□□□□□ -1.66
Col8a1Q00780 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Col8a1Q00780 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC4.71□□□□□ -1.66
Col8a1Q00780 Gm4263-202ENSMUST00000221392 667 ntBASIC4.71□□□□□ -1.66
Col8a1Q00780 CT030705.1-201ENSMUST00000223971 533 ntBASIC4.71□□□□□ -1.66
Col8a1Q00780 AC161383.1-201ENSMUST00000227356 527 ntBASIC4.71□□□□□ -1.66
Col8a1Q00780 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Col8a1Q00780 Gm26056-201ENSMUST00000083043 104 ntBASIC4.71□□□□□ -1.66
Col8a1Q00780 Gm23679-201ENSMUST00000083161 119 ntBASIC4.71□□□□□ -1.66
Col8a1Q00780 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Col8a1Q00780 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Col8a1Q00780 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Col8a1Q00780 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC4.71□□□□□ -1.66
Col8a1Q00780 AC158779.2-201ENSMUST00000227902 1947 ntBASIC4.71□□□□□ -1.66
Col8a1Q00780 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Col8a1Q00780 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Col8a1Q00780 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
Col8a1Q00780 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Col8a1Q00780 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Col8a1Q00780 Gm14988-201ENSMUST00000117224 1548 ntBASIC4.71□□□□□ -1.66
Col8a1Q00780 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Col8a1Q00780 Gm37482-201ENSMUST00000194899 2791 ntBASIC4.7□□□□□ -1.66
Col8a1Q00780 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col8a1Q00780 Olfr303-205ENSMUST00000216409 4106 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Col8a1Q00780 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col8a1Q00780 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Col8a1Q00780 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC4.7□□□□□ -1.66
Col8a1Q00780 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col8a1Q00780 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col8a1Q00780 Gm43662-201ENSMUST00000198310 2271 ntBASIC4.7□□□□□ -1.66
Col8a1Q00780 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC4.7□□□□□ -1.66
Col8a1Q00780 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Col8a1Q00780 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col8a1Q00780 Olfr131-202ENSMUST00000172933 1358 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
Col8a1Q00780 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col8a1Q00780 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Col8a1Q00780 Gm8202-201ENSMUST00000117682 310 ntBASIC4.7□□□□□ -1.66
Col8a1Q00780 Eif3s6-ps1-201ENSMUST00000117907 470 ntBASIC4.7□□□□□ -1.66
Col8a1Q00780 Gm12985-201ENSMUST00000118376 183 ntBASIC4.7□□□□□ -1.66
Col8a1Q00780 Gm3267-201ENSMUST00000118671 473 ntBASIC4.7□□□□□ -1.66
Col8a1Q00780 Gm11719-201ENSMUST00000119399 351 ntBASIC4.7□□□□□ -1.66
Col8a1Q00780 Gm22208-201ENSMUST00000122658 110 ntBASIC4.7□□□□□ -1.66
Col8a1Q00780 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC4.7□□□□□ -1.66
Col8a1Q00780 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC4.7□□□□□ -1.66
Col8a1Q00780 Gm22870-201ENSMUST00000157501 112 ntBASIC4.7□□□□□ -1.66
Col8a1Q00780 Gm22336-201ENSMUST00000157719 107 ntBASIC4.7□□□□□ -1.66
Col8a1Q00780 Gm25227-201ENSMUST00000158204 112 ntBASIC4.7□□□□□ -1.66
Col8a1Q00780 Ear-ps12-201ENSMUST00000161720 451 ntBASIC4.7□□□□□ -1.66
Col8a1Q00780 Gm6673-201ENSMUST00000166114 700 ntBASIC4.7□□□□□ -1.66
Col8a1Q00780 Gm4134-201ENSMUST00000173244 563 ntBASIC4.7□□□□□ -1.66
Col8a1Q00780 Gm23631-201ENSMUST00000175291 123 ntBASIC4.7□□□□□ -1.66
Col8a1Q00780 Gm24415-201ENSMUST00000180218 107 ntBASIC4.7□□□□□ -1.66
Col8a1Q00780 Gm25873-201ENSMUST00000180317 107 ntBASIC4.7□□□□□ -1.66
Col8a1Q00780 Gm26866-201ENSMUST00000180414 802 ntBASIC4.7□□□□□ -1.66
Col8a1Q00780 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Col8a1Q00780 Gm8296-201ENSMUST00000185597 524 ntBASIC4.7□□□□□ -1.66
Col8a1Q00780 Gm19029-201ENSMUST00000189923 564 ntBASIC4.7□□□□□ -1.66
Col8a1Q00780 Gm28069-201ENSMUST00000189926 214 ntBASIC4.7□□□□□ -1.66
Col8a1Q00780 Gm4322-201ENSMUST00000191094 336 ntBASIC4.7□□□□□ -1.66
Col8a1Q00780 Gm36891-201ENSMUST00000191995 655 ntBASIC4.7□□□□□ -1.66
Col8a1Q00780 Ighv3-7-201ENSMUST00000193370 348 ntBASIC4.7□□□□□ -1.66
Col8a1Q00780 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC4.7□□□□□ -1.66
Col8a1Q00780 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC4.7□□□□□ -1.66
Col8a1Q00780 Gm45215-201ENSMUST00000206407 395 ntBASIC4.7□□□□□ -1.66
Col8a1Q00780 Gm45409-201ENSMUST00000211486 252 ntBASIC4.7□□□□□ -1.66
Col8a1Q00780 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC4.7□□□□□ -1.66
Col8a1Q00780 AC159238.1-201ENSMUST00000220699 343 ntTSL 3 BASIC4.7□□□□□ -1.66
Col8a1Q00780 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC4.7□□□□□ -1.66
Col8a1Q00780 Gm17915-201ENSMUST00000222077 548 ntBASIC4.7□□□□□ -1.66
Col8a1Q00780 Olfr1112-201ENSMUST00000053050 957 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Col8a1Q00780 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col8a1Q00780 Gm22265-201ENSMUST00000082947 116 ntBASIC4.7□□□□□ -1.66
Col8a1Q00780 Gm3867-201ENSMUST00000086108 279 ntBASIC4.7□□□□□ -1.66
Col8a1Q00780 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col8a1Q00780 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col8a1Q00780 Gm37087-201ENSMUST00000192966 3309 ntBASIC4.7□□□□□ -1.66
Col8a1Q00780 Gm37752-201ENSMUST00000193494 3309 ntBASIC4.7□□□□□ -1.66
Col8a1Q00780 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms