Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm19269-201ENSMUST00000211401 804 ntBASIC3.37□□□□□ -1.87
Nkx3-1P97436 AC139638.1-201ENSMUST00000218027 364 ntBASIC3.37□□□□□ -1.87
Nkx3-1P97436 AC154634.3-201ENSMUST00000224589 736 ntBASIC3.37□□□□□ -1.87
Nkx3-1P97436 AC131117.1-201ENSMUST00000225154 1171 ntBASIC3.37□□□□□ -1.87
Nkx3-1P97436 Gm5265-201ENSMUST00000076828 342 ntBASIC3.37□□□□□ -1.87
Nkx3-1P97436 Snord21-201ENSMUST00000082519 94 ntBASIC3.37□□□□□ -1.87
Nkx3-1P97436 Gm23736-201ENSMUST00000082553 75 ntBASIC3.37□□□□□ -1.87
Nkx3-1P97436 Snora7a-201ENSMUST00000082629 140 ntBASIC3.37□□□□□ -1.87
Nkx3-1P97436 Mir193a-201ENSMUST00000083461 66 ntBASIC3.37□□□□□ -1.87
Nkx3-1P97436 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Nkx3-1P97436 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Nkx3-1P97436 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC3.37□□□□□ -1.87
Nkx3-1P97436 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Nkx3-1P97436 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Nkx3-1P97436 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Nkx3-1P97436 AC134596.1-201ENSMUST00000222016 1922 ntBASIC3.36□□□□□ -1.87
Nkx3-1P97436 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Nkx3-1P97436 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Nkx3-1P97436 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Nkx3-1P97436 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Nkx3-1P97436 Olfr955-203ENSMUST00000220176 1452 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Nkx3-1P97436 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Nkx3-1P97436 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Nkx3-1P97436 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Nkx3-1P97436 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Nkx3-1P97436 Gm22472-201ENSMUST00000104115 134 ntBASIC3.36□□□□□ -1.87
Nkx3-1P97436 Gm24067-201ENSMUST00000104514 85 ntBASIC3.36□□□□□ -1.87
Nkx3-1P97436 Gm12931-201ENSMUST00000117046 324 ntBASIC3.36□□□□□ -1.87
Nkx3-1P97436 Gm13170-201ENSMUST00000119716 643 ntBASIC3.36□□□□□ -1.87
Nkx3-1P97436 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC3.36□□□□□ -1.87
Nkx3-1P97436 Gm23540-201ENSMUST00000157543 164 ntBASIC3.36□□□□□ -1.87
Nkx3-1P97436 Gm23585-201ENSMUST00000157656 102 ntBASIC3.36□□□□□ -1.87
Nkx3-1P97436 Gm25667-201ENSMUST00000157701 275 ntBASIC3.36□□□□□ -1.87
Nkx3-1P97436 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC3.36□□□□□ -1.87
Nkx3-1P97436 Gm27189-201ENSMUST00000184119 190 ntBASIC3.36□□□□□ -1.87
Nkx3-1P97436 Gm36964-201ENSMUST00000191876 198 ntBASIC3.36□□□□□ -1.87
Nkx3-1P97436 Gm37343-201ENSMUST00000192542 111 ntBASIC3.36□□□□□ -1.87
Nkx3-1P97436 Gm8023-201ENSMUST00000195298 903 ntBASIC3.36□□□□□ -1.87
Nkx3-1P97436 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Nkx3-1P97436 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC3.36□□□□□ -1.87
Nkx3-1P97436 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Nkx3-1P97436 Gm45031-201ENSMUST00000206800 288 ntBASIC3.36□□□□□ -1.87
Nkx3-1P97436 Gm8748-201ENSMUST00000211125 587 ntBASIC3.36□□□□□ -1.87
Nkx3-1P97436 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC3.36□□□□□ -1.87
Nkx3-1P97436 AC153932.1-201ENSMUST00000218558 787 ntBASIC3.36□□□□□ -1.87
Nkx3-1P97436 AC125379.1-201ENSMUST00000221928 111 ntBASIC3.36□□□□□ -1.87
Nkx3-1P97436 AC167420.1-201ENSMUST00000222999 2121 ntBASIC3.36□□□□□ -1.87
Nkx3-1P97436 AC158142.1-201ENSMUST00000226721 416 ntBASIC3.36□□□□□ -1.87
Nkx3-1P97436 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Nkx3-1P97436 Olfr167-201ENSMUST00000054606 939 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Nkx3-1P97436 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Nkx3-1P97436 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Nkx3-1P97436 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Nkx3-1P97436 Olfr1314-201ENSMUST00000099598 939 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Nkx3-1P97436 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Nkx3-1P97436 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Nkx3-1P97436 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Nkx3-1P97436 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Nkx3-1P97436 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Nkx3-1P97436 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Nkx3-1P97436 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Nkx3-1P97436 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Nkx3-1P97436 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Nkx3-1P97436 Gm9343-201ENSMUST00000209016 2609 ntBASIC3.35□□□□□ -1.87
Nkx3-1P97436 Olfr1031-202ENSMUST00000216807 1946 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Nkx3-1P97436 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Nkx3-1P97436 Vmn1r30-204ENSMUST00000228577 1968 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Nkx3-1P97436 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Nkx3-1P97436 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Nkx3-1P97436 Gm15613-201ENSMUST00000118396 326 ntBASIC3.35□□□□□ -1.87
Nkx3-1P97436 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC3.35□□□□□ -1.87
Nkx3-1P97436 Olfr1397-ps1-201ENSMUST00000121388 962 ntBASIC3.35□□□□□ -1.87
Nkx3-1P97436 n-R5s68-201ENSMUST00000122639 82 ntBASIC3.35□□□□□ -1.87
Nkx3-1P97436 Gm22320-201ENSMUST00000157149 312 ntBASIC3.35□□□□□ -1.87
Nkx3-1P97436 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC3.35□□□□□ -1.87
Nkx3-1P97436 Gm18560-201ENSMUST00000173463 1123 ntBASIC3.35□□□□□ -1.87
Nkx3-1P97436 Gm26746-201ENSMUST00000181722 487 ntBASIC3.35□□□□□ -1.87
Nkx3-1P97436 Mir6938-201ENSMUST00000184173 63 ntBASIC3.35□□□□□ -1.87
Nkx3-1P97436 Gm44296-201ENSMUST00000204689 681 ntTSL 3 BASIC3.35□□□□□ -1.87
Nkx3-1P97436 Gm36371-201ENSMUST00000209043 1103 ntBASIC3.35□□□□□ -1.87
Nkx3-1P97436 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC3.35□□□□□ -1.87
Nkx3-1P97436 Gm45574-201ENSMUST00000210921 331 ntBASIC3.35□□□□□ -1.87
Nkx3-1P97436 AC159246.1-201ENSMUST00000214478 249 ntBASIC3.35□□□□□ -1.87
Nkx3-1P97436 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Nkx3-1P97436 AC153816.1-201ENSMUST00000217870 764 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Nkx3-1P97436 Pah-204ENSMUST00000219813 789 ntTSL 3 BASIC3.35□□□□□ -1.87
Nkx3-1P97436 Gm7119-201ENSMUST00000221345 695 ntBASIC3.35□□□□□ -1.87
Nkx3-1P97436 CT571268.1-201ENSMUST00000222320 407 ntBASIC3.35□□□□□ -1.87
Nkx3-1P97436 Fabp2-201ENSMUST00000023820 965 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Nkx3-1P97436 Sult1e1-201ENSMUST00000031201 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Nkx3-1P97436 Olfr938-201ENSMUST00000056499 1190 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Nkx3-1P97436 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Nkx3-1P97436 Gm23623-201ENSMUST00000082461 107 ntBASIC3.35□□□□□ -1.87
Nkx3-1P97436 Gm23925-201ENSMUST00000082471 132 ntBASIC3.35□□□□□ -1.87
Nkx3-1P97436 Bcl2a1a-201ENSMUST00000098485 819 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Nkx3-1P97436 Olfr510-203ENSMUST00000216331 3101 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Nkx3-1P97436 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Nkx3-1P97436 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Nkx3-1P97436 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Nkx3-1P97436 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms