Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Col2a1P28481 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
Col2a1P28481 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Col2a1P28481 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Col2a1P28481 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Col2a1P28481 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Col2a1P28481 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC4.2□□□□□ -1.74
Col2a1P28481 Gm38101-201ENSMUST00000193484 3557 ntBASIC4.2□□□□□ -1.74
Col2a1P28481 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Col2a1P28481 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Col2a1P28481 Gm23697-201ENSMUST00000103897 110 ntBASIC4.2□□□□□ -1.74
Col2a1P28481 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC4.2□□□□□ -1.74
Col2a1P28481 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Col2a1P28481 Gm29747-201ENSMUST00000194764 585 ntBASIC4.2□□□□□ -1.74
Col2a1P28481 Gm37102-201ENSMUST00000195740 1105 ntBASIC4.2□□□□□ -1.74
Col2a1P28481 Gm44712-201ENSMUST00000206250 1076 ntBASIC4.2□□□□□ -1.74
Col2a1P28481 Gm44824-201ENSMUST00000207021 229 ntBASIC4.2□□□□□ -1.74
Col2a1P28481 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Col2a1P28481 AC080021.1-201ENSMUST00000228104 700 ntBASIC4.2□□□□□ -1.74
Col2a1P28481 Olfr1197-201ENSMUST00000099815 945 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Col2a1P28481 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Col2a1P28481 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Col2a1P28481 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Col2a1P28481 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Col2a1P28481 4930519E07Rik-201ENSMUST00000200907 1665 ntBASIC4.2□□□□□ -1.74
Col2a1P28481 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Col2a1P28481 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Col2a1P28481 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Col2a1P28481 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Col2a1P28481 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Col2a1P28481 Gm30302-202ENSMUST00000220773 3511 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Col2a1P28481 Gm10375-201ENSMUST00000100692 836 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Col2a1P28481 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC4.19□□□□□ -1.74
Col2a1P28481 Olfr1118-201ENSMUST00000121296 996 ntAPPRIS P2 BASIC4.19□□□□□ -1.74
Col2a1P28481 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Col2a1P28481 Gm27592-201ENSMUST00000157729 126 ntBASIC4.19□□□□□ -1.74
Col2a1P28481 Gm22174-201ENSMUST00000175050 125 ntBASIC4.19□□□□□ -1.74
Col2a1P28481 Gm22692-201ENSMUST00000175055 125 ntBASIC4.19□□□□□ -1.74
Col2a1P28481 Gm27634-201ENSMUST00000175060 126 ntBASIC4.19□□□□□ -1.74
Col2a1P28481 Gm26460-201ENSMUST00000175061 126 ntBASIC4.19□□□□□ -1.74
Col2a1P28481 Gm22460-201ENSMUST00000175269 124 ntBASIC4.19□□□□□ -1.74
Col2a1P28481 Gm24365-201ENSMUST00000175384 125 ntBASIC4.19□□□□□ -1.74
Col2a1P28481 Gm44310-201ENSMUST00000175424 126 ntBASIC4.19□□□□□ -1.74
Col2a1P28481 Gm22639-201ENSMUST00000175591 125 ntBASIC4.19□□□□□ -1.74
Col2a1P28481 Gm24979-201ENSMUST00000178626 126 ntBASIC4.19□□□□□ -1.74
Col2a1P28481 Gm27743-201ENSMUST00000185136 126 ntBASIC4.19□□□□□ -1.74
Col2a1P28481 Gm37698-201ENSMUST00000192605 463 ntBASIC4.19□□□□□ -1.74
Col2a1P28481 Gm9722-201ENSMUST00000194568 802 ntBASIC4.19□□□□□ -1.74
Col2a1P28481 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Col2a1P28481 Gm43232-201ENSMUST00000201346 364 ntBASIC4.19□□□□□ -1.74
Col2a1P28481 Gm45080-201ENSMUST00000206648 283 ntBASIC4.19□□□□□ -1.74
Col2a1P28481 Znrd1as-204ENSMUST00000209623 1218 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
Col2a1P28481 AC140785.1-201ENSMUST00000217782 383 ntBASIC4.19□□□□□ -1.74
Col2a1P28481 AC107864.1-201ENSMUST00000217937 496 ntBASIC4.19□□□□□ -1.74
Col2a1P28481 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC4.19□□□□□ -1.74
Col2a1P28481 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC4.19□□□□□ -1.74
Col2a1P28481 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Col2a1P28481 Olfr679-201ENSMUST00000098158 952 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Col2a1P28481 Gm42905-201ENSMUST00000196237 1611 ntBASIC4.19□□□□□ -1.74
Col2a1P28481 Gm8473-201ENSMUST00000176697 1885 ntBASIC4.19□□□□□ -1.74
Col2a1P28481 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Col2a1P28481 Olfr168-202ENSMUST00000213480 2205 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Col2a1P28481 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Col2a1P28481 Gm42770-201ENSMUST00000199657 4155 ntBASIC4.19□□□□□ -1.74
Col2a1P28481 Gm37747-201ENSMUST00000193717 4003 ntBASIC4.19□□□□□ -1.74
Col2a1P28481 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Col2a1P28481 Gm26522-201ENSMUST00000181565 1555 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Col2a1P28481 Gm13310-201ENSMUST00000120962 1381 ntBASIC4.18□□□□□ -1.74
Col2a1P28481 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Col2a1P28481 Gm9157-201ENSMUST00000117673 225 ntBASIC4.18□□□□□ -1.74
Col2a1P28481 Gm15021-201ENSMUST00000117832 742 ntBASIC4.18□□□□□ -1.74
Col2a1P28481 Gm11913-201ENSMUST00000119094 336 ntBASIC4.18□□□□□ -1.74
Col2a1P28481 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC4.18□□□□□ -1.74
Col2a1P28481 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Col2a1P28481 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC4.18□□□□□ -1.74
Col2a1P28481 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Col2a1P28481 AC118733.1-201ENSMUST00000217387 1217 ntBASIC4.18□□□□□ -1.74
Col2a1P28481 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC4.18□□□□□ -1.74
Col2a1P28481 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Col2a1P28481 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC4.18□□□□□ -1.74
Col2a1P28481 Gm45066-201ENSMUST00000207528 2551 ntBASIC4.18□□□□□ -1.74
Col2a1P28481 Gm37461-201ENSMUST00000193929 3704 ntBASIC4.18□□□□□ -1.74
Col2a1P28481 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC4.18□□□□□ -1.74
Col2a1P28481 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Col2a1P28481 Olfr1167-202ENSMUST00000216951 4276 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Col2a1P28481 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Col2a1P28481 AC154548.1-201ENSMUST00000225844 3838 ntBASIC4.18□□□□□ -1.74
Col2a1P28481 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC4.18□□□□□ -1.74
Col2a1P28481 Gm23257-201ENSMUST00000158322 132 ntBASIC4.18□□□□□ -1.74
Col2a1P28481 Gm25835-201ENSMUST00000158917 144 ntBASIC4.18□□□□□ -1.74
Col2a1P28481 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC4.18□□□□□ -1.74
Col2a1P28481 Gm2447-201ENSMUST00000191954 544 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Col2a1P28481 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Col2a1P28481 Gm44513-201ENSMUST00000206811 439 ntBASIC4.18□□□□□ -1.74
Col2a1P28481 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC4.18□□□□□ -1.74
Col2a1P28481 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC4.18□□□□□ -1.74
Col2a1P28481 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Col2a1P28481 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Col2a1P28481 Mir504-201ENSMUST00000093602 79 ntBASIC4.18□□□□□ -1.74
Col2a1P28481 Gm37677-201ENSMUST00000194520 7634 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms