Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Sdc1P18828 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Sdc1P18828 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC3.32□□□□□ -1.88
Sdc1P18828 Gm15075-201ENSMUST00000122187 477 ntBASIC3.32□□□□□ -1.88
Sdc1P18828 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Sdc1P18828 Gm13131-201ENSMUST00000122228 321 ntBASIC3.32□□□□□ -1.88
Sdc1P18828 Gm22208-201ENSMUST00000122658 110 ntBASIC3.32□□□□□ -1.88
Sdc1P18828 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC3.32□□□□□ -1.88
Sdc1P18828 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Sdc1P18828 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Sdc1P18828 Gm16557-201ENSMUST00000159182 191 ntBASIC3.32□□□□□ -1.88
Sdc1P18828 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Sdc1P18828 Gm17030-201ENSMUST00000167016 393 ntBASIC3.32□□□□□ -1.88
Sdc1P18828 Gm8214-201ENSMUST00000172123 351 ntBASIC3.32□□□□□ -1.88
Sdc1P18828 Gm23638-201ENSMUST00000175073 126 ntBASIC3.32□□□□□ -1.88
Sdc1P18828 Gm23158-201ENSMUST00000175076 126 ntBASIC3.32□□□□□ -1.88
Sdc1P18828 Gm22907-201ENSMUST00000175198 126 ntBASIC3.32□□□□□ -1.88
Sdc1P18828 Gm22625-201ENSMUST00000175382 126 ntBASIC3.32□□□□□ -1.88
Sdc1P18828 Gm22875-201ENSMUST00000175449 126 ntBASIC3.32□□□□□ -1.88
Sdc1P18828 Gm25197-201ENSMUST00000175516 126 ntBASIC3.32□□□□□ -1.88
Sdc1P18828 Gm27857-201ENSMUST00000176930 126 ntBASIC3.32□□□□□ -1.88
Sdc1P18828 Gm26268-201ENSMUST00000177685 126 ntBASIC3.32□□□□□ -1.88
Sdc1P18828 Gm23681-201ENSMUST00000178821 126 ntBASIC3.32□□□□□ -1.88
Sdc1P18828 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Sdc1P18828 Gm27940-201ENSMUST00000184449 98 ntBASIC3.32□□□□□ -1.88
Sdc1P18828 Gm29138-201ENSMUST00000191444 348 ntBASIC3.32□□□□□ -1.88
Sdc1P18828 Gm42919-201ENSMUST00000197753 1284 ntBASIC3.32□□□□□ -1.88
Sdc1P18828 Ighv1-79-201ENSMUST00000200152 350 ntBASIC3.32□□□□□ -1.88
Sdc1P18828 Gm2011-203ENSMUST00000203750 435 ntBASIC3.32□□□□□ -1.88
Sdc1P18828 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC3.32□□□□□ -1.88
Sdc1P18828 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Sdc1P18828 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC3.32□□□□□ -1.88
Sdc1P18828 Gm19232-201ENSMUST00000211621 652 ntBASIC3.32□□□□□ -1.88
Sdc1P18828 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC3.32□□□□□ -1.88
Sdc1P18828 Olfr956-ps1-201ENSMUST00000216492 867 ntBASIC3.32□□□□□ -1.88
Sdc1P18828 Gm5176-202ENSMUST00000220267 583 ntBASIC3.32□□□□□ -1.88
Sdc1P18828 AC117797.2-201ENSMUST00000224419 531 ntBASIC3.32□□□□□ -1.88
Sdc1P18828 1700129C05Rik-201ENSMUST00000022548 1067 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Sdc1P18828 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC3.32□□□□□ -1.88
Sdc1P18828 Olfr784-201ENSMUST00000082342 960 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Sdc1P18828 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.32□□□□□ -1.88
Sdc1P18828 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Sdc1P18828 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Sdc1P18828 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Sdc1P18828 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC3.32□□□□□ -1.88
Sdc1P18828 Gm36969-201ENSMUST00000194551 2809 ntBASIC3.32□□□□□ -1.88
Sdc1P18828 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Sdc1P18828 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Sdc1P18828 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Sdc1P18828 Gm44668-201ENSMUST00000207911 3265 ntBASIC3.31□□□□□ -1.88
Sdc1P18828 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC3.31□□□□□ -1.88
Sdc1P18828 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Sdc1P18828 Gm37879-201ENSMUST00000193112 1995 ntBASIC3.31□□□□□ -1.88
Sdc1P18828 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC3.31□□□□□ -1.88
Sdc1P18828 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Sdc1P18828 Igkv4-78-201ENSMUST00000103343 358 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Sdc1P18828 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Sdc1P18828 Gm26143-201ENSMUST00000104480 108 ntBASIC3.31□□□□□ -1.88
Sdc1P18828 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC3.31□□□□□ -1.88
Sdc1P18828 Gm11433-201ENSMUST00000118318 228 ntBASIC3.31□□□□□ -1.88
Sdc1P18828 Gm13359-201ENSMUST00000119000 695 ntBASIC3.31□□□□□ -1.88
Sdc1P18828 Gm12186-201ENSMUST00000119050 945 ntBASIC3.31□□□□□ -1.88
Sdc1P18828 Gm14577-201ENSMUST00000121134 256 ntBASIC3.31□□□□□ -1.88
Sdc1P18828 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC3.31□□□□□ -1.88
Sdc1P18828 Gm12313-201ENSMUST00000121347 421 ntBASIC3.31□□□□□ -1.88
Sdc1P18828 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Sdc1P18828 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC3.31□□□□□ -1.88
Sdc1P18828 Gm24216-201ENSMUST00000158259 117 ntBASIC3.31□□□□□ -1.88
Sdc1P18828 Gm22135-201ENSMUST00000158752 108 ntBASIC3.31□□□□□ -1.88
Sdc1P18828 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC3.31□□□□□ -1.88
Sdc1P18828 Adgrg4-206ENSMUST00000168724 531 ntBASIC3.31□□□□□ -1.88
Sdc1P18828 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Sdc1P18828 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
Sdc1P18828 Gm28426-201ENSMUST00000187385 620 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Sdc1P18828 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC3.31□□□□□ -1.88
Sdc1P18828 Gm9238-201ENSMUST00000196181 329 ntBASIC3.31□□□□□ -1.88
Sdc1P18828 Gm36259-201ENSMUST00000197340 392 ntBASIC3.31□□□□□ -1.88
Sdc1P18828 Gm8929-201ENSMUST00000197781 1132 ntBASIC3.31□□□□□ -1.88
Sdc1P18828 Gm44134-201ENSMUST00000203064 661 ntTSL 2 BASIC3.31□□□□□ -1.88
Sdc1P18828 Gm44023-201ENSMUST00000203710 469 ntBASIC3.31□□□□□ -1.88
Sdc1P18828 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC3.31□□□□□ -1.88
Sdc1P18828 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC3.31□□□□□ -1.88
Sdc1P18828 Gm45731-201ENSMUST00000211988 1203 ntBASIC3.31□□□□□ -1.88
Sdc1P18828 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC3.31□□□□□ -1.88
Sdc1P18828 Gm29774-201ENSMUST00000219270 436 ntBASIC3.31□□□□□ -1.88
Sdc1P18828 AC127279.1-201ENSMUST00000220140 637 ntBASIC3.31□□□□□ -1.88
Sdc1P18828 AC132237.2-201ENSMUST00000221702 1209 ntBASIC3.31□□□□□ -1.88
Sdc1P18828 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC3.31□□□□□ -1.88
Sdc1P18828 AC164315.1-201ENSMUST00000226452 708 ntBASIC3.31□□□□□ -1.88
Sdc1P18828 Rybp-ps-201ENSMUST00000069489 681 ntBASIC3.31□□□□□ -1.88
Sdc1P18828 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Sdc1P18828 Mir325-201ENSMUST00000083491 98 ntBASIC3.31□□□□□ -1.88
Sdc1P18828 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Sdc1P18828 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
Sdc1P18828 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.31□□□□□ -1.88
Sdc1P18828 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Sdc1P18828 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Sdc1P18828 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Sdc1P18828 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Sdc1P18828 Gm37916-201ENSMUST00000192153 2435 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms