Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC3.51□□□□□ -1.85
Cdx1P18111 Gm44032-201ENSMUST00000204841 166 ntBASIC3.51□□□□□ -1.85
Cdx1P18111 Gm45228-201ENSMUST00000206585 352 ntBASIC3.51□□□□□ -1.85
Cdx1P18111 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC3.51□□□□□ -1.85
Cdx1P18111 Gm18225-201ENSMUST00000216708 742 ntBASIC3.51□□□□□ -1.85
Cdx1P18111 Gm46327-201ENSMUST00000218240 365 ntBASIC3.51□□□□□ -1.85
Cdx1P18111 Gm17820-201ENSMUST00000220213 1068 ntBASIC3.51□□□□□ -1.85
Cdx1P18111 Gm8785-201ENSMUST00000220259 487 ntBASIC3.51□□□□□ -1.85
Cdx1P18111 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC3.51□□□□□ -1.85
Cdx1P18111 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Cdx1P18111 AC162934.1-201ENSMUST00000222880 309 ntBASIC3.51□□□□□ -1.85
Cdx1P18111 CT025689.2-201ENSMUST00000224979 429 ntBASIC3.51□□□□□ -1.85
Cdx1P18111 Ear-ps9-202ENSMUST00000226796 245 ntBASIC3.51□□□□□ -1.85
Cdx1P18111 Iapp-201ENSMUST00000041993 839 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Cdx1P18111 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
Cdx1P18111 Olfr1093-201ENSMUST00000055273 969 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Cdx1P18111 Gm5185-201ENSMUST00000080271 619 ntBASIC3.51□□□□□ -1.85
Cdx1P18111 Gm25810-201ENSMUST00000082752 108 ntBASIC3.51□□□□□ -1.85
Cdx1P18111 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
Cdx1P18111 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Cdx1P18111 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Cdx1P18111 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
Cdx1P18111 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC3.51□□□□□ -1.85
Cdx1P18111 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Cdx1P18111 Olfr1257-202ENSMUST00000111519 2756 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
Cdx1P18111 Gm7233-201ENSMUST00000168619 1761 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Cdx1P18111 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Cdx1P18111 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Cdx1P18111 A230085B16Rik-201ENSMUST00000209781 1856 ntBASIC3.5□□□□□ -1.85
Cdx1P18111 Gm37916-201ENSMUST00000192153 2435 ntBASIC3.5□□□□□ -1.85
Cdx1P18111 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Cdx1P18111 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC3.5□□□□□ -1.85
Cdx1P18111 Gm23594-201ENSMUST00000104307 134 ntBASIC3.5□□□□□ -1.85
Cdx1P18111 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Cdx1P18111 Gm15333-201ENSMUST00000118825 364 ntBASIC3.5□□□□□ -1.85
Cdx1P18111 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Cdx1P18111 Gm22789-201ENSMUST00000157884 130 ntBASIC3.5□□□□□ -1.85
Cdx1P18111 Gm24930-201ENSMUST00000158315 83 ntBASIC3.5□□□□□ -1.85
Cdx1P18111 4930445B16Rik-201ENSMUST00000170085 1123 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Cdx1P18111 Vmn2r-ps74-201ENSMUST00000174705 917 ntBASIC3.5□□□□□ -1.85
Cdx1P18111 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC3.5□□□□□ -1.85
Cdx1P18111 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC3.5□□□□□ -1.85
Cdx1P18111 Gm21850-201ENSMUST00000179792 359 ntBASIC3.5□□□□□ -1.85
Cdx1P18111 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC3.5□□□□□ -1.85
Cdx1P18111 Mir7022-201ENSMUST00000183749 61 ntBASIC3.5□□□□□ -1.85
Cdx1P18111 Mir7074-201ENSMUST00000183884 63 ntBASIC3.5□□□□□ -1.85
Cdx1P18111 Mir6391-201ENSMUST00000184391 104 ntBASIC3.5□□□□□ -1.85
Cdx1P18111 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Cdx1P18111 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Cdx1P18111 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Cdx1P18111 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Cdx1P18111 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Cdx1P18111 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Cdx1P18111 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Cdx1P18111 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Cdx1P18111 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Cdx1P18111 Gm29534-201ENSMUST00000187328 382 ntBASIC3.5□□□□□ -1.85
Cdx1P18111 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Cdx1P18111 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Cdx1P18111 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Cdx1P18111 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Cdx1P18111 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Cdx1P18111 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Cdx1P18111 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Cdx1P18111 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Cdx1P18111 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Cdx1P18111 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Cdx1P18111 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Cdx1P18111 Gm18181-201ENSMUST00000190670 736 ntBASIC3.5□□□□□ -1.85
Cdx1P18111 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Cdx1P18111 Gm37293-201ENSMUST00000191658 295 ntBASIC3.5□□□□□ -1.85
Cdx1P18111 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC3.5□□□□□ -1.85
Cdx1P18111 Gm44343-201ENSMUST00000196702 90 ntBASIC3.5□□□□□ -1.85
Cdx1P18111 Gm8891-201ENSMUST00000198546 832 ntBASIC3.5□□□□□ -1.85
Cdx1P18111 Gm2522-201ENSMUST00000204280 322 ntBASIC3.5□□□□□ -1.85
Cdx1P18111 Gm45735-201ENSMUST00000212779 319 ntBASIC3.5□□□□□ -1.85
Cdx1P18111 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC3.5□□□□□ -1.85
Cdx1P18111 Gm8249-201ENSMUST00000219225 465 ntBASIC3.5□□□□□ -1.85
Cdx1P18111 Gm7540-201ENSMUST00000219764 926 ntBASIC3.5□□□□□ -1.85
Cdx1P18111 Gm8274-201ENSMUST00000219820 463 ntBASIC3.5□□□□□ -1.85
Cdx1P18111 AC154441.1-201ENSMUST00000223653 1006 ntBASIC3.5□□□□□ -1.85
Cdx1P18111 AC124524.2-201ENSMUST00000223940 588 ntBASIC3.5□□□□□ -1.85
Cdx1P18111 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC3.5□□□□□ -1.85
Cdx1P18111 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Cdx1P18111 Olfr693-201ENSMUST00000057817 952 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Cdx1P18111 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Cdx1P18111 Olfr1205-201ENSMUST00000076438 924 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Cdx1P18111 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Cdx1P18111 Gm22245-201ENSMUST00000082479 103 ntBASIC3.5□□□□□ -1.85
Cdx1P18111 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Cdx1P18111 Bsph1-201ENSMUST00000098811 822 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
Cdx1P18111 Olfr1160-201ENSMUST00000099839 960 ntBASIC3.5□□□□□ -1.85
Cdx1P18111 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Cdx1P18111 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Cdx1P18111 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC3.5□□□□□ -1.85
Cdx1P18111 Epyc-201ENSMUST00000020094 1723 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Cdx1P18111 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
Cdx1P18111 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC3.49□□□□□ -1.85
Cdx1P18111 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC3.49□□□□□ -1.85
Cdx1P18111 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 137.4 ms