Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Col1a1P11087 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Col1a1P11087 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Col1a1P11087 Gm5590-202ENSMUST00000186976 2315 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Col1a1P11087 Gm37461-201ENSMUST00000193929 3704 ntBASIC4.3□□□□□ -1.72
Col1a1P11087 AC154627.2-201ENSMUST00000227028 4669 ntBASIC4.3□□□□□ -1.72
Col1a1P11087 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
Col1a1P11087 Vmn2r57-201ENSMUST00000165029 2592 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Col1a1P11087 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Col1a1P11087 Gm38126-201ENSMUST00000195297 4003 ntBASIC4.3□□□□□ -1.72
Col1a1P11087 Gm24608-201ENSMUST00000104381 136 ntBASIC4.3□□□□□ -1.72
Col1a1P11087 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC4.3□□□□□ -1.72
Col1a1P11087 Gm11913-201ENSMUST00000119094 336 ntBASIC4.3□□□□□ -1.72
Col1a1P11087 Gm11708-201ENSMUST00000119530 832 ntBASIC4.3□□□□□ -1.72
Col1a1P11087 Gm12873-201ENSMUST00000119988 422 ntBASIC4.3□□□□□ -1.72
Col1a1P11087 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC4.3□□□□□ -1.72
Col1a1P11087 Gm17777-201ENSMUST00000189740 1276 ntBASIC4.3□□□□□ -1.72
Col1a1P11087 Olfr1244-ps1-201ENSMUST00000213226 683 ntBASIC4.3□□□□□ -1.72
Col1a1P11087 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Col1a1P11087 Sult6b1-201ENSMUST00000042683 839 ntTSL 5 BASIC4.3□□□□□ -1.72
Col1a1P11087 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Col1a1P11087 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Col1a1P11087 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
Col1a1P11087 AC154386.1-201ENSMUST00000222753 2871 ntBASIC4.29□□□□□ -1.72
Col1a1P11087 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Col1a1P11087 Olfr694-204ENSMUST00000216895 4853 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Col1a1P11087 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Col1a1P11087 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Col1a1P11087 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
Col1a1P11087 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
Col1a1P11087 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Col1a1P11087 Gm3089-201ENSMUST00000200804 1395 ntBASIC4.29□□□□□ -1.72
Col1a1P11087 Gm3302-201ENSMUST00000201462 1395 ntBASIC4.29□□□□□ -1.72
Col1a1P11087 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Col1a1P11087 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Col1a1P11087 Gm13803-201ENSMUST00000117547 489 ntBASIC4.29□□□□□ -1.72
Col1a1P11087 Gm22956-201ENSMUST00000122520 80 ntBASIC4.29□□□□□ -1.72
Col1a1P11087 Gm8289-201ENSMUST00000144814 1182 ntBASIC4.29□□□□□ -1.72
Col1a1P11087 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC4.29□□□□□ -1.72
Col1a1P11087 Gm7948-201ENSMUST00000212607 844 ntBASIC4.29□□□□□ -1.72
Col1a1P11087 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Col1a1P11087 Csn1s2b-201ENSMUST00000072539 810 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
Col1a1P11087 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Col1a1P11087 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Col1a1P11087 Gm43508-201ENSMUST00000197251 3783 ntBASIC4.29□□□□□ -1.72
Col1a1P11087 Gm37677-201ENSMUST00000194520 7634 ntBASIC4.29□□□□□ -1.72
Col1a1P11087 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
Col1a1P11087 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Col1a1P11087 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Col1a1P11087 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Col1a1P11087 Olfr699-203ENSMUST00000216307 4193 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Col1a1P11087 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC4.28□□□□□ -1.72
Col1a1P11087 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Col1a1P11087 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Col1a1P11087 Gm44676-201ENSMUST00000208520 3055 ntBASIC4.28□□□□□ -1.72
Col1a1P11087 Gm11746-201ENSMUST00000119843 821 ntBASIC4.28□□□□□ -1.72
Col1a1P11087 Gm14101-201ENSMUST00000121502 473 ntBASIC4.28□□□□□ -1.72
Col1a1P11087 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC4.28□□□□□ -1.72
Col1a1P11087 Gm23753-201ENSMUST00000157575 149 ntBASIC4.28□□□□□ -1.72
Col1a1P11087 Gm29064-201ENSMUST00000187014 813 ntBASIC4.28□□□□□ -1.72
Col1a1P11087 Gm28924-201ENSMUST00000190012 241 ntBASIC4.28□□□□□ -1.72
Col1a1P11087 Gm37081-201ENSMUST00000192034 196 ntBASIC4.28□□□□□ -1.72
Col1a1P11087 CT009604.2-201ENSMUST00000225531 377 ntBASIC4.28□□□□□ -1.72
Col1a1P11087 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Col1a1P11087 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Col1a1P11087 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Col1a1P11087 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC4.28□□□□□ -1.72
Col1a1P11087 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC4.28□□□□□ -1.73
Col1a1P11087 Olfr1085-203ENSMUST00000214566 5129 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Col1a1P11087 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC4.27□□□□□ -1.73
Col1a1P11087 Gm13664-201ENSMUST00000117304 345 ntBASIC4.27□□□□□ -1.73
Col1a1P11087 Gm26254-201ENSMUST00000122491 118 ntBASIC4.27□□□□□ -1.73
Col1a1P11087 Gm24936-201ENSMUST00000122598 247 ntBASIC4.27□□□□□ -1.73
Col1a1P11087 Gm26100-201ENSMUST00000157245 127 ntBASIC4.27□□□□□ -1.73
Col1a1P11087 Mir7k-201ENSMUST00000184115 110 ntBASIC4.27□□□□□ -1.73
Col1a1P11087 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC4.27□□□□□ -1.73
Col1a1P11087 Gm43491-201ENSMUST00000197133 784 ntBASIC4.27□□□□□ -1.73
Col1a1P11087 Gm43155-201ENSMUST00000202661 494 ntBASIC4.27□□□□□ -1.73
Col1a1P11087 Gm45554-202ENSMUST00000210964 1090 ntTSL 5 BASIC4.27□□□□□ -1.73
Col1a1P11087 Gm18228-201ENSMUST00000217297 1091 ntBASIC4.27□□□□□ -1.73
Col1a1P11087 Gm32283-201ENSMUST00000218861 549 ntTSL 5 BASIC4.27□□□□□ -1.73
Col1a1P11087 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC4.27□□□□□ -1.73
Col1a1P11087 AC124729.1-201ENSMUST00000225327 976 ntBASIC4.27□□□□□ -1.73
Col1a1P11087 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Col1a1P11087 Gm4987-201ENSMUST00000078326 408 ntBASIC4.27□□□□□ -1.73
Col1a1P11087 Gm38101-201ENSMUST00000193484 3557 ntBASIC4.27□□□□□ -1.73
Col1a1P11087 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC4.27□□□□□ -1.73
Col1a1P11087 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
Col1a1P11087 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
Col1a1P11087 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Col1a1P11087 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Col1a1P11087 AC122840.2-201ENSMUST00000221030 2659 ntBASIC4.26□□□□□ -1.73
Col1a1P11087 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Col1a1P11087 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Col1a1P11087 Gm3543-201ENSMUST00000111870 899 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
Col1a1P11087 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC4.26□□□□□ -1.73
Col1a1P11087 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC4.26□□□□□ -1.73
Col1a1P11087 Gm16260-201ENSMUST00000155141 304 ntBASIC4.26□□□□□ -1.73
Col1a1P11087 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
Col1a1P11087 AC154618.1-201ENSMUST00000227451 303 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms