Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Gm37879-201ENSMUST00000193112 1995 ntBASIC3.62□□□□□ -1.83
Sec61bQ9CQS8 9930038B18Rik-201ENSMUST00000151816 3966 ntTSL 5 BASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Gm37894-201ENSMUST00000195416 2599 ntBASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Vmn2r-ps42-201ENSMUST00000174123 2083 ntBASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Gm2065-201ENSMUST00000194697 2757 ntBASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Gm10933-201ENSMUST00000221891 1861 ntBASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Gm3978-201ENSMUST00000163406 2512 ntBASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Gm20749-201ENSMUST00000186319 3492 ntBASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Stk26-202ENSMUST00000114887 3173 ntTSL 5 BASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Gm23311-201ENSMUST00000104152 134 ntBASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Gm22021-201ENSMUST00000104353 107 ntBASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Gm11976-201ENSMUST00000119236 295 ntBASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Gm12118-201ENSMUST00000119766 532 ntBASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Gm11553-201ENSMUST00000120682 240 ntBASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 AA413626-201ENSMUST00000121125 494 ntBASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Gm15349-201ENSMUST00000121154 204 ntBASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Gm8761-201ENSMUST00000121507 955 ntBASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Gm3362-201ENSMUST00000148102 466 ntBASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Gm22216-201ENSMUST00000157557 114 ntBASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Gm24176-201ENSMUST00000158928 121 ntBASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Gm17109-201ENSMUST00000163985 358 ntBASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Gm25675-201ENSMUST00000174979 118 ntBASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Gm22242-201ENSMUST00000175224 118 ntBASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Gm6061-201ENSMUST00000175860 492 ntBASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Gm25671-201ENSMUST00000178612 105 ntBASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 BC035044-202ENSMUST00000178918 466 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Gm5558-201ENSMUST00000178933 495 ntBASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Gm23307-201ENSMUST00000179167 105 ntBASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Gm25286-201ENSMUST00000179790 105 ntBASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Gm27018-201ENSMUST00000181136 225 ntBASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Gm26746-201ENSMUST00000181722 487 ntBASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Gm27295-201ENSMUST00000184264 153 ntBASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Gm28023-201ENSMUST00000184556 60 ntBASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Gm27825-201ENSMUST00000184586 60 ntBASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Gm35323-201ENSMUST00000191836 499 ntBASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Gm38097-201ENSMUST00000192936 439 ntBASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Gm42594-201ENSMUST00000199511 246 ntBASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Gm43631-201ENSMUST00000202011 369 ntBASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Gm44163-201ENSMUST00000205140 475 ntBASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Gm45327-201ENSMUST00000211612 565 ntBASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 AC154521.1-201ENSMUST00000222635 330 ntBASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 AC154576.2-203ENSMUST00000224736 253 ntBASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 AC137902.1-201ENSMUST00000228184 102 ntBASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Olfr1336-201ENSMUST00000056120 945 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Gm6065-201ENSMUST00000081336 492 ntBASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Gm25929-201ENSMUST00000082784 107 ntBASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Vmn2r61-201ENSMUST00000166131 2598 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Lrrtm3-201ENSMUST00000105439 3896 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Gm37456-201ENSMUST00000193176 5837 ntBASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Gm8744-201ENSMUST00000204475 3581 ntBASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Olfr1500-201ENSMUST00000067670 2092 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Zfp661-201ENSMUST00000077422 2765 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
Sec61bQ9CQS8 Gm15095-201ENSMUST00000118996 1430 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms