Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Gm10074-201ENSMUST00000174543 249 ntBASIC4.79□□□□□ -1.64
Atg4aQ8C9S8 Mir1251-201ENSMUST00000175486 84 ntBASIC4.79□□□□□ -1.64
Atg4aQ8C9S8 Gm22120-201ENSMUST00000175590 70 ntBASIC4.79□□□□□ -1.64
Atg4aQ8C9S8 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC4.79□□□□□ -1.64
Atg4aQ8C9S8 Gm29334-201ENSMUST00000190334 357 ntBASIC4.79□□□□□ -1.64
Atg4aQ8C9S8 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Atg4aQ8C9S8 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC4.79□□□□□ -1.64
Atg4aQ8C9S8 Gm44395-201ENSMUST00000197056 153 ntBASIC4.79□□□□□ -1.64
Atg4aQ8C9S8 Gm17951-201ENSMUST00000198536 496 ntBASIC4.79□□□□□ -1.64
Atg4aQ8C9S8 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Atg4aQ8C9S8 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC4.79□□□□□ -1.64
Atg4aQ8C9S8 Gm43992-201ENSMUST00000204358 197 ntBASIC4.79□□□□□ -1.64
Atg4aQ8C9S8 Znrd1as-204ENSMUST00000209623 1218 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Atg4aQ8C9S8 Gm19233-201ENSMUST00000219772 936 ntBASIC4.79□□□□□ -1.64
Atg4aQ8C9S8 Gm3829-201ENSMUST00000222362 619 ntBASIC4.79□□□□□ -1.64
Atg4aQ8C9S8 Olfr504-201ENSMUST00000075595 958 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Atg4aQ8C9S8 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Atg4aQ8C9S8 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Atg4aQ8C9S8 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Atg4aQ8C9S8 Gm13058-201ENSMUST00000117097 1435 ntBASIC4.79□□□□□ -1.64
Atg4aQ8C9S8 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC4.79□□□□□ -1.64
Atg4aQ8C9S8 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Atg4aQ8C9S8 AC173482.1-201ENSMUST00000224494 3815 ntBASIC4.78□□□□□ -1.64
Atg4aQ8C9S8 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Atg4aQ8C9S8 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Atg4aQ8C9S8 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Atg4aQ8C9S8 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC4.78□□□□□ -1.64
Atg4aQ8C9S8 AC153522.2-201ENSMUST00000218389 3853 ntBASIC4.78□□□□□ -1.64
Atg4aQ8C9S8 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Atg4aQ8C9S8 Snord66-201ENSMUST00000104051 75 ntBASIC4.78□□□□□ -1.64
Atg4aQ8C9S8 Gm11566-201ENSMUST00000118550 203 ntBASIC4.78□□□□□ -1.64
Atg4aQ8C9S8 Gm11510-201ENSMUST00000120278 347 ntBASIC4.78□□□□□ -1.64
Atg4aQ8C9S8 Gm14605-201ENSMUST00000120599 268 ntBASIC4.78□□□□□ -1.64
Atg4aQ8C9S8 Gm14229-201ENSMUST00000121178 850 ntBASIC4.78□□□□□ -1.64
Atg4aQ8C9S8 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Atg4aQ8C9S8 Gm25386-201ENSMUST00000157814 288 ntBASIC4.78□□□□□ -1.64
Atg4aQ8C9S8 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Atg4aQ8C9S8 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Atg4aQ8C9S8 Mir6345-201ENSMUST00000184286 128 ntBASIC4.78□□□□□ -1.64
Atg4aQ8C9S8 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Atg4aQ8C9S8 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC4.78□□□□□ -1.64
Atg4aQ8C9S8 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC4.78□□□□□ -1.64
Atg4aQ8C9S8 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC4.78□□□□□ -1.64
Atg4aQ8C9S8 Gm37416-201ENSMUST00000193596 318 ntBASIC4.78□□□□□ -1.64
Atg4aQ8C9S8 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Atg4aQ8C9S8 Gm44403-201ENSMUST00000198554 129 ntBASIC4.78□□□□□ -1.64
Atg4aQ8C9S8 Gm43424-201ENSMUST00000200484 253 ntBASIC4.78□□□□□ -1.64
Atg4aQ8C9S8 Gm31520-201ENSMUST00000203048 733 ntBASIC4.78□□□□□ -1.64
Atg4aQ8C9S8 Gm18944-201ENSMUST00000207672 643 ntBASIC4.78□□□□□ -1.64
Atg4aQ8C9S8 1700042O05Rik-201ENSMUST00000219017 584 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Atg4aQ8C9S8 AC158392.1-201ENSMUST00000223720 1069 ntBASIC4.78□□□□□ -1.64
Atg4aQ8C9S8 AC118006.2-201ENSMUST00000224167 962 ntBASIC4.78□□□□□ -1.64
Atg4aQ8C9S8 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Atg4aQ8C9S8 Gm44678-201ENSMUST00000207828 2775 ntBASIC4.78□□□□□ -1.64
Atg4aQ8C9S8 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Atg4aQ8C9S8 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
Atg4aQ8C9S8 AC167420.1-201ENSMUST00000222999 2121 ntBASIC4.78□□□□□ -1.64
Atg4aQ8C9S8 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC4.78□□□□□ -1.64
Atg4aQ8C9S8 Gm42852-201ENSMUST00000202649 1379 ntBASIC4.78□□□□□ -1.64
Atg4aQ8C9S8 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Atg4aQ8C9S8 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
Atg4aQ8C9S8 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Atg4aQ8C9S8 Gm22269-201ENSMUST00000104002 130 ntBASIC4.77□□□□□ -1.65
Atg4aQ8C9S8 Gm8569-201ENSMUST00000117630 647 ntBASIC4.77□□□□□ -1.65
Atg4aQ8C9S8 Cyp2j7-ps3-201ENSMUST00000121405 206 ntBASIC4.77□□□□□ -1.65
Atg4aQ8C9S8 Gm14589-201ENSMUST00000121640 727 ntBASIC4.77□□□□□ -1.65
Atg4aQ8C9S8 Gm9003-201ENSMUST00000121810 482 ntBASIC4.77□□□□□ -1.65
Atg4aQ8C9S8 Gm26476-201ENSMUST00000122618 313 ntBASIC4.77□□□□□ -1.65
Atg4aQ8C9S8 Gm22986-201ENSMUST00000122753 130 ntBASIC4.77□□□□□ -1.65
Atg4aQ8C9S8 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC4.77□□□□□ -1.65
Atg4aQ8C9S8 Gm24960-201ENSMUST00000157923 90 ntBASIC4.77□□□□□ -1.65
Atg4aQ8C9S8 Gm24850-201ENSMUST00000158029 119 ntBASIC4.77□□□□□ -1.65
Atg4aQ8C9S8 Gm21960-201ENSMUST00000181924 452 ntBASIC4.77□□□□□ -1.65
Atg4aQ8C9S8 Gm27715-201ENSMUST00000184714 260 ntBASIC4.77□□□□□ -1.65
Atg4aQ8C9S8 Gm28471-201ENSMUST00000185994 615 ntBASIC4.77□□□□□ -1.65
Atg4aQ8C9S8 1700054K19Rik-201ENSMUST00000186102 452 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Atg4aQ8C9S8 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Atg4aQ8C9S8 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC4.77□□□□□ -1.65
Atg4aQ8C9S8 Gm37599-201ENSMUST00000193067 489 ntBASIC4.77□□□□□ -1.65
Atg4aQ8C9S8 Gm42976-201ENSMUST00000200313 222 ntBASIC4.77□□□□□ -1.65
Atg4aQ8C9S8 Trav12-4-201ENSMUST00000200663 271 ntBASIC4.77□□□□□ -1.65
Atg4aQ8C9S8 Ociad2-206ENSMUST00000202012 876 ntTSL 5 BASIC4.77□□□□□ -1.65
Atg4aQ8C9S8 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC4.77□□□□□ -1.65
Atg4aQ8C9S8 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Atg4aQ8C9S8 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC4.77□□□□□ -1.65
Atg4aQ8C9S8 AC163621.2-201ENSMUST00000222229 682 ntBASIC4.77□□□□□ -1.65
Atg4aQ8C9S8 CT025536.1-201ENSMUST00000226744 844 ntBASIC4.77□□□□□ -1.65
Atg4aQ8C9S8 Gm5548-201ENSMUST00000055878 397 ntBASIC4.77□□□□□ -1.65
Atg4aQ8C9S8 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Atg4aQ8C9S8 Gm23518-201ENSMUST00000082835 153 ntBASIC4.77□□□□□ -1.65
Atg4aQ8C9S8 Olfr1000-202ENSMUST00000213837 1915 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
Atg4aQ8C9S8 Olfr1217-203ENSMUST00000214022 3947 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
Atg4aQ8C9S8 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Atg4aQ8C9S8 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Atg4aQ8C9S8 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Atg4aQ8C9S8 AC153150.1-201ENSMUST00000226065 3782 ntBASIC4.77□□□□□ -1.65
Atg4aQ8C9S8 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Atg4aQ8C9S8 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Atg4aQ8C9S8 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Atg4aQ8C9S8 Olfr813-202ENSMUST00000204622 2410 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms