Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trim9Q8C7M3 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Trim9Q8C7M3 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Trim9Q8C7M3 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trim9Q8C7M3 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
Trim9Q8C7M3 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC5.07□□□□□ -1.6
Trim9Q8C7M3 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC5.07□□□□□ -1.6
Trim9Q8C7M3 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC5.07□□□□□ -1.6
Trim9Q8C7M3 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trim9Q8C7M3 Gm5925-201ENSMUST00000105016 1497 ntBASIC5.07□□□□□ -1.6
Trim9Q8C7M3 Vmn2r17-201ENSMUST00000171841 2550 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Trim9Q8C7M3 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Trim9Q8C7M3 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Trim9Q8C7M3 Gm42843-201ENSMUST00000196328 3616 ntBASIC5.06□□□□□ -1.6
Trim9Q8C7M3 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Trim9Q8C7M3 Gm43329-201ENSMUST00000200120 3232 ntBASIC5.06□□□□□ -1.6
Trim9Q8C7M3 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Trim9Q8C7M3 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Trim9Q8C7M3 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Trim9Q8C7M3 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Trim9Q8C7M3 Olfr698-204ENSMUST00000216255 4024 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Trim9Q8C7M3 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Trim9Q8C7M3 Hbp1-204ENSMUST00000175686 1315 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Trim9Q8C7M3 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Trim9Q8C7M3 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Trim9Q8C7M3 Gm22498-201ENSMUST00000104497 86 ntBASIC5.06□□□□□ -1.6
Trim9Q8C7M3 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Trim9Q8C7M3 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC5.06□□□□□ -1.6
Trim9Q8C7M3 Gm14365-201ENSMUST00000117535 587 ntBASIC5.06□□□□□ -1.6
Trim9Q8C7M3 Gm13806-201ENSMUST00000117822 325 ntBASIC5.06□□□□□ -1.6
Trim9Q8C7M3 Gm15166-201ENSMUST00000120790 385 ntBASIC5.06□□□□□ -1.6
Trim9Q8C7M3 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Trim9Q8C7M3 Gm14411-201ENSMUST00000121798 914 ntBASIC5.06□□□□□ -1.6
Trim9Q8C7M3 Gm13232-201ENSMUST00000121816 632 ntBASIC5.06□□□□□ -1.6
Trim9Q8C7M3 Gm24517-201ENSMUST00000122560 107 ntBASIC5.06□□□□□ -1.6
Trim9Q8C7M3 Gm5353-201ENSMUST00000139800 793 ntBASIC5.06□□□□□ -1.6
Trim9Q8C7M3 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC5.06□□□□□ -1.6
Trim9Q8C7M3 Snora81-201ENSMUST00000157310 178 ntBASIC5.06□□□□□ -1.6
Trim9Q8C7M3 Gm24636-201ENSMUST00000158673 288 ntBASIC5.06□□□□□ -1.6
Trim9Q8C7M3 Gm23025-201ENSMUST00000158769 111 ntBASIC5.06□□□□□ -1.6
Trim9Q8C7M3 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Trim9Q8C7M3 Gm26992-201ENSMUST00000182089 468 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
Trim9Q8C7M3 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC5.06□□□□□ -1.6
Trim9Q8C7M3 Gm28661-201ENSMUST00000188231 681 ntBASIC5.06□□□□□ -1.6
Trim9Q8C7M3 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC5.06□□□□□ -1.6
Trim9Q8C7M3 Gm20832-201ENSMUST00000189076 665 ntBASIC5.06□□□□□ -1.6
Trim9Q8C7M3 Gm38150-201ENSMUST00000192996 452 ntBASIC5.06□□□□□ -1.6
Trim9Q8C7M3 Gm30638-201ENSMUST00000195570 656 ntBASIC5.06□□□□□ -1.6
Trim9Q8C7M3 Gm36728-201ENSMUST00000195782 665 ntBASIC5.06□□□□□ -1.6
Trim9Q8C7M3 Gm21006-201ENSMUST00000196930 667 ntBASIC5.06□□□□□ -1.6
Trim9Q8C7M3 Igkv12-49-201ENSMUST00000197714 278 ntBASIC5.06□□□□□ -1.6
Trim9Q8C7M3 Gm8953-201ENSMUST00000198497 904 ntTSL 5 BASIC5.06□□□□□ -1.6
Trim9Q8C7M3 Gng12-208ENSMUST00000204511 739 ntTSL 5 BASIC5.06□□□□□ -1.6
Trim9Q8C7M3 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC5.06□□□□□ -1.6
Trim9Q8C7M3 Gm45857-201ENSMUST00000212207 356 ntBASIC5.06□□□□□ -1.6
Trim9Q8C7M3 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Trim9Q8C7M3 AC131745.1-201ENSMUST00000223660 330 ntBASIC5.06□□□□□ -1.6
Trim9Q8C7M3 AC122393.1-201ENSMUST00000226570 319 ntBASIC5.06□□□□□ -1.6
Trim9Q8C7M3 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Trim9Q8C7M3 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Trim9Q8C7M3 Gm7204-201ENSMUST00000062591 600 ntBASIC5.06□□□□□ -1.6
Trim9Q8C7M3 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Trim9Q8C7M3 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Trim9Q8C7M3 Gm43209-201ENSMUST00000198949 1588 ntBASIC5.06□□□□□ -1.6
Trim9Q8C7M3 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
Trim9Q8C7M3 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Trim9Q8C7M3 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
Trim9Q8C7M3 Gm37628-201ENSMUST00000194644 5440 ntBASIC5.06□□□□□ -1.6
Trim9Q8C7M3 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Trim9Q8C7M3 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Trim9Q8C7M3 Gm5117-201ENSMUST00000178878 2553 ntBASIC5.06□□□□□ -1.6
Trim9Q8C7M3 Gm43426-201ENSMUST00000197287 2597 ntBASIC5.06□□□□□ -1.6
Trim9Q8C7M3 Gm13712-201ENSMUST00000117484 2295 ntBASIC5.06□□□□□ -1.6
Trim9Q8C7M3 Gm3985-201ENSMUST00000132101 2515 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Trim9Q8C7M3 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Trim9Q8C7M3 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Trim9Q8C7M3 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
Trim9Q8C7M3 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Trim9Q8C7M3 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC5.05□□□□□ -1.6
Trim9Q8C7M3 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Trim9Q8C7M3 Gm37250-201ENSMUST00000194919 2388 ntBASIC5.05□□□□□ -1.6
Trim9Q8C7M3 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Trim9Q8C7M3 Gm24117-201ENSMUST00000103973 133 ntBASIC5.05□□□□□ -1.6
Trim9Q8C7M3 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Trim9Q8C7M3 Gm22072-201ENSMUST00000116850 121 ntBASIC5.05□□□□□ -1.6
Trim9Q8C7M3 Gm22676-201ENSMUST00000116972 129 ntBASIC5.05□□□□□ -1.6
Trim9Q8C7M3 Gm12006-201ENSMUST00000120786 403 ntBASIC5.05□□□□□ -1.6
Trim9Q8C7M3 Gm14303-201ENSMUST00000121320 171 ntBASIC5.05□□□□□ -1.6
Trim9Q8C7M3 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Trim9Q8C7M3 Gm24507-201ENSMUST00000157683 134 ntBASIC5.05□□□□□ -1.6
Trim9Q8C7M3 Gm25048-201ENSMUST00000158598 91 ntBASIC5.05□□□□□ -1.6
Trim9Q8C7M3 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Trim9Q8C7M3 Gm17177-201ENSMUST00000169144 483 ntBASIC5.05□□□□□ -1.6
Trim9Q8C7M3 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Trim9Q8C7M3 Gm29259-201ENSMUST00000186396 694 ntBASIC5.05□□□□□ -1.6
Trim9Q8C7M3 Gm29281-201ENSMUST00000188077 381 ntBASIC5.05□□□□□ -1.6
Trim9Q8C7M3 Gm29545-201ENSMUST00000188878 694 ntBASIC5.05□□□□□ -1.6
Trim9Q8C7M3 Gm9687-201ENSMUST00000189312 602 ntBASIC5.05□□□□□ -1.6
Trim9Q8C7M3 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Trim9Q8C7M3 Gm7967-203ENSMUST00000191409 1049 ntTSL 5 BASIC5.05□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms