Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm12358-201ENSMUST00000121842 520 ntBASIC3.28□□□□□ -1.88
Col6a6Q8C6K9 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC3.28□□□□□ -1.88
Col6a6Q8C6K9 Gm25835-201ENSMUST00000158917 144 ntBASIC3.28□□□□□ -1.88
Col6a6Q8C6K9 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC3.28□□□□□ -1.88
Col6a6Q8C6K9 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
Col6a6Q8C6K9 Olfr799-201ENSMUST00000071126 936 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Col6a6Q8C6K9 Gm25205-201ENSMUST00000082841 103 ntBASIC3.28□□□□□ -1.88
Col6a6Q8C6K9 Gm37461-201ENSMUST00000193929 3704 ntBASIC3.28□□□□□ -1.88
Col6a6Q8C6K9 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
Col6a6Q8C6K9 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
Col6a6Q8C6K9 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
Col6a6Q8C6K9 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
Col6a6Q8C6K9 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Col6a6Q8C6K9 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Col6a6Q8C6K9 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Col6a6Q8C6K9 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Col6a6Q8C6K9 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Col6a6Q8C6K9 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
Col6a6Q8C6K9 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Col6a6Q8C6K9 Gm24067-201ENSMUST00000104514 85 ntBASIC3.28□□□□□ -1.88
Col6a6Q8C6K9 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Col6a6Q8C6K9 Prl2c2-201ENSMUST00000110594 842 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Col6a6Q8C6K9 Gm11262-201ENSMUST00000119326 833 ntBASIC3.28□□□□□ -1.88
Col6a6Q8C6K9 Gm14101-201ENSMUST00000121502 473 ntBASIC3.28□□□□□ -1.88
Col6a6Q8C6K9 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC3.28□□□□□ -1.88
Col6a6Q8C6K9 Gm18900-201ENSMUST00000193218 584 ntBASIC3.28□□□□□ -1.88
Col6a6Q8C6K9 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC3.28□□□□□ -1.88
Col6a6Q8C6K9 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC3.28□□□□□ -1.88
Col6a6Q8C6K9 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Col6a6Q8C6K9 Gm2710-201ENSMUST00000073196 603 ntBASIC3.28□□□□□ -1.88
Col6a6Q8C6K9 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
Col6a6Q8C6K9 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Col6a6Q8C6K9 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC3.28□□□□□ -1.89
Col6a6Q8C6K9 Gm45149-201ENSMUST00000206459 2172 ntBASIC3.28□□□□□ -1.89
Col6a6Q8C6K9 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Col6a6Q8C6K9 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
Col6a6Q8C6K9 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Col6a6Q8C6K9 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC3.27□□□□□ -1.89
Col6a6Q8C6K9 Gm14975-201ENSMUST00000118741 664 ntBASIC3.27□□□□□ -1.89
Col6a6Q8C6K9 Gm15387-201ENSMUST00000120421 648 ntBASIC3.27□□□□□ -1.89
Col6a6Q8C6K9 Gm14463-201ENSMUST00000121117 498 ntBASIC3.27□□□□□ -1.89
Col6a6Q8C6K9 Gm14581-201ENSMUST00000121726 198 ntBASIC3.27□□□□□ -1.89
Col6a6Q8C6K9 Gm24244-201ENSMUST00000157317 130 ntBASIC3.27□□□□□ -1.89
Col6a6Q8C6K9 Gm24014-201ENSMUST00000157728 157 ntBASIC3.27□□□□□ -1.89
Col6a6Q8C6K9 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC3.27□□□□□ -1.89
Col6a6Q8C6K9 Gm26607-201ENSMUST00000180661 867 ntBASIC3.27□□□□□ -1.89
Col6a6Q8C6K9 Gm2189-201ENSMUST00000201419 429 ntBASIC3.27□□□□□ -1.89
Col6a6Q8C6K9 AC159885.1-201ENSMUST00000222221 199 ntBASIC3.27□□□□□ -1.89
Col6a6Q8C6K9 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Col6a6Q8C6K9 Dapl1-201ENSMUST00000028369 573 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Col6a6Q8C6K9 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC3.27□□□□□ -1.89
Col6a6Q8C6K9 Gm5518-201ENSMUST00000084171 648 ntBASIC3.27□□□□□ -1.89
Col6a6Q8C6K9 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Col6a6Q8C6K9 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Col6a6Q8C6K9 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Col6a6Q8C6K9 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Col6a6Q8C6K9 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Col6a6Q8C6K9 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Col6a6Q8C6K9 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Col6a6Q8C6K9 Gm11566-201ENSMUST00000118550 203 ntBASIC3.27□□□□□ -1.89
Col6a6Q8C6K9 Gm25295-201ENSMUST00000122794 306 ntBASIC3.27□□□□□ -1.89
Col6a6Q8C6K9 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC3.27□□□□□ -1.89
Col6a6Q8C6K9 Gm24976-201ENSMUST00000158972 135 ntBASIC3.27□□□□□ -1.89
Col6a6Q8C6K9 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC3.27□□□□□ -1.89
Col6a6Q8C6K9 Gm20767-201ENSMUST00000179071 510 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Col6a6Q8C6K9 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC3.27□□□□□ -1.89
Col6a6Q8C6K9 Gm33973-201ENSMUST00000195148 534 ntBASIC3.27□□□□□ -1.89
Col6a6Q8C6K9 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC3.27□□□□□ -1.89
Col6a6Q8C6K9 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Col6a6Q8C6K9 AC104897.1-201ENSMUST00000222638 3628 ntBASIC3.27□□□□□ -1.89
Col6a6Q8C6K9 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC3.27□□□□□ -1.89
Col6a6Q8C6K9 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Col6a6Q8C6K9 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Col6a6Q8C6K9 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Col6a6Q8C6K9 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
Col6a6Q8C6K9 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Col6a6Q8C6K9 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Col6a6Q8C6K9 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC3.26□□□□□ -1.89
Col6a6Q8C6K9 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC3.26□□□□□ -1.89
Col6a6Q8C6K9 Gm24068-201ENSMUST00000104513 132 ntBASIC3.26□□□□□ -1.89
Col6a6Q8C6K9 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
Col6a6Q8C6K9 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC3.26□□□□□ -1.89
Col6a6Q8C6K9 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC3.26□□□□□ -1.89
Col6a6Q8C6K9 Gm16134-201ENSMUST00000161714 336 ntBASIC3.26□□□□□ -1.89
Col6a6Q8C6K9 Gm25037-201ENSMUST00000175418 110 ntBASIC3.26□□□□□ -1.89
Col6a6Q8C6K9 Gm28186-201ENSMUST00000187447 679 ntBASIC3.26□□□□□ -1.89
Col6a6Q8C6K9 Gm28113-201ENSMUST00000188280 229 ntBASIC3.26□□□□□ -1.89
Col6a6Q8C6K9 Gm17954-201ENSMUST00000195893 607 ntBASIC3.26□□□□□ -1.89
Col6a6Q8C6K9 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Col6a6Q8C6K9 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Col6a6Q8C6K9 Gm43870-201ENSMUST00000205102 4369 ntBASIC3.26□□□□□ -1.89
Col6a6Q8C6K9 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Col6a6Q8C6K9 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
Col6a6Q8C6K9 Gm40020-201ENSMUST00000215677 1635 ntBASIC3.26□□□□□ -1.89
Col6a6Q8C6K9 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Col6a6Q8C6K9 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Col6a6Q8C6K9 Gm30292-201ENSMUST00000194198 3000 ntTSL 3 BASIC3.26□□□□□ -1.89
Col6a6Q8C6K9 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Col6a6Q8C6K9 Gm44527-202ENSMUST00000204519 1314 ntBASIC3.26□□□□□ -1.89
Col6a6Q8C6K9 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 99.5 ms