Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Trim47Q8C0E3 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Trim47Q8C0E3 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
Trim47Q8C0E3 Gm37775-201ENSMUST00000194120 2313 ntBASIC6.43□□□□□ -1.38
Trim47Q8C0E3 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC6.43□□□□□ -1.38
Trim47Q8C0E3 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Trim47Q8C0E3 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Trim47Q8C0E3 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC6.43□□□□□ -1.38
Trim47Q8C0E3 AC116950.1-201ENSMUST00000226322 3250 ntBASIC6.43□□□□□ -1.38
Trim47Q8C0E3 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Trim47Q8C0E3 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC6.43□□□□□ -1.38
Trim47Q8C0E3 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Trim47Q8C0E3 Gm43169-201ENSMUST00000199544 4734 ntBASIC6.43□□□□□ -1.38
Trim47Q8C0E3 Gm23691-201ENSMUST00000101878 107 ntBASIC6.43□□□□□ -1.38
Trim47Q8C0E3 Mir711-201ENSMUST00000102188 82 ntBASIC6.43□□□□□ -1.38
Trim47Q8C0E3 Gm13451-201ENSMUST00000117649 592 ntBASIC6.43□□□□□ -1.38
Trim47Q8C0E3 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Trim47Q8C0E3 Gm23206-201ENSMUST00000122720 184 ntBASIC6.43□□□□□ -1.38
Trim47Q8C0E3 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Trim47Q8C0E3 Gm13335-201ENSMUST00000129994 471 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Trim47Q8C0E3 Gm15691-201ENSMUST00000138626 849 ntTSL 3 BASIC6.43□□□□□ -1.38
Trim47Q8C0E3 Gm22597-201ENSMUST00000157602 80 ntBASIC6.43□□□□□ -1.38
Trim47Q8C0E3 Gm3141-201ENSMUST00000168726 499 ntBASIC6.43□□□□□ -1.38
Trim47Q8C0E3 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC6.43□□□□□ -1.38
Trim47Q8C0E3 Gm29159-201ENSMUST00000187969 379 ntBASIC6.43□□□□□ -1.38
Trim47Q8C0E3 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Trim47Q8C0E3 Gm8929-201ENSMUST00000197781 1132 ntBASIC6.43□□□□□ -1.38
Trim47Q8C0E3 Gm43710-201ENSMUST00000199583 452 ntBASIC6.43□□□□□ -1.38
Trim47Q8C0E3 Gm44604-201ENSMUST00000205475 496 ntBASIC6.43□□□□□ -1.38
Trim47Q8C0E3 AC132232.1-201ENSMUST00000214667 1019 ntTSL 3 BASIC6.43□□□□□ -1.38
Trim47Q8C0E3 Gm7540-201ENSMUST00000219764 926 ntBASIC6.43□□□□□ -1.38
Trim47Q8C0E3 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC6.43□□□□□ -1.38
Trim47Q8C0E3 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC6.43□□□□□ -1.38
Trim47Q8C0E3 AC122393.3-201ENSMUST00000226343 1059 ntBASIC6.43□□□□□ -1.38
Trim47Q8C0E3 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Trim47Q8C0E3 Gm4963-201ENSMUST00000072718 378 ntBASIC6.43□□□□□ -1.38
Trim47Q8C0E3 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Trim47Q8C0E3 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC6.43□□□□□ -1.38
Trim47Q8C0E3 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Trim47Q8C0E3 Gm25937-201ENSMUST00000083912 107 ntBASIC6.43□□□□□ -1.38
Trim47Q8C0E3 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Trim47Q8C0E3 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Trim47Q8C0E3 Gm3182-201ENSMUST00000167902 1753 ntAPPRIS P5 TSL 5 BASIC6.43□□□□□ -1.38
Trim47Q8C0E3 Olfr398-203ENSMUST00000214334 5348 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Trim47Q8C0E3 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Trim47Q8C0E3 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Trim47Q8C0E3 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Trim47Q8C0E3 Gm9239-201ENSMUST00000186942 2557 ntBASIC6.43□□□□□ -1.38
Trim47Q8C0E3 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC6.43□□□□□ -1.38
Trim47Q8C0E3 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Trim47Q8C0E3 Gm44530-201ENSMUST00000207920 3559 ntBASIC6.43□□□□□ -1.38
Trim47Q8C0E3 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Trim47Q8C0E3 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Trim47Q8C0E3 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Trim47Q8C0E3 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC6.42□□□□□ -1.38
Trim47Q8C0E3 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Trim47Q8C0E3 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Trim47Q8C0E3 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC6.42□□□□□ -1.38
Trim47Q8C0E3 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC6.42□□□□□ -1.38
Trim47Q8C0E3 Gm6818-201ENSMUST00000190556 2558 ntBASIC6.42□□□□□ -1.38
Trim47Q8C0E3 AC156031.1-201ENSMUST00000217288 2555 ntBASIC6.42□□□□□ -1.38
Trim47Q8C0E3 Kif2a-201ENSMUST00000022204 5304 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Trim47Q8C0E3 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Trim47Q8C0E3 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Trim47Q8C0E3 Gm16270-201ENSMUST00000160327 3238 ntBASIC6.42□□□□□ -1.38
Trim47Q8C0E3 Olfr1480-204ENSMUST00000207987 1804 ntTSL 3 BASIC6.42□□□□□ -1.38
Trim47Q8C0E3 Gm11970-201ENSMUST00000116105 320 ntBASIC6.42□□□□□ -1.38
Trim47Q8C0E3 Gm14355-201ENSMUST00000117352 264 ntBASIC6.42□□□□□ -1.38
Trim47Q8C0E3 Gm14333-201ENSMUST00000130484 264 ntBASIC6.42□□□□□ -1.38
Trim47Q8C0E3 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Trim47Q8C0E3 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC6.42□□□□□ -1.38
Trim47Q8C0E3 Gm26102-201ENSMUST00000157251 284 ntBASIC6.42□□□□□ -1.38
Trim47Q8C0E3 Mir1945-201ENSMUST00000157919 78 ntBASIC6.42□□□□□ -1.38
Trim47Q8C0E3 Mir3095-201ENSMUST00000175552 87 ntBASIC6.42□□□□□ -1.38
Trim47Q8C0E3 Gm22259-201ENSMUST00000178926 107 ntBASIC6.42□□□□□ -1.38
Trim47Q8C0E3 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Trim47Q8C0E3 Gm27585-201ENSMUST00000183717 199 ntBASIC6.42□□□□□ -1.38
Trim47Q8C0E3 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Trim47Q8C0E3 Gm8600-201ENSMUST00000186320 905 ntBASIC6.42□□□□□ -1.38
Trim47Q8C0E3 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC6.42□□□□□ -1.38
Trim47Q8C0E3 Ighv3-2-201ENSMUST00000191842 349 ntBASIC6.42□□□□□ -1.38
Trim47Q8C0E3 Gm43804-201ENSMUST00000198280 456 ntBASIC6.42□□□□□ -1.38
Trim47Q8C0E3 Gm45070-201ENSMUST00000208100 246 ntBASIC6.42□□□□□ -1.38
Trim47Q8C0E3 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC6.42□□□□□ -1.38
Trim47Q8C0E3 Gm10988-201ENSMUST00000209150 1088 ntBASIC6.42□□□□□ -1.38
Trim47Q8C0E3 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC6.42□□□□□ -1.38
Trim47Q8C0E3 AC124426.2-201ENSMUST00000220886 404 ntTSL 5 BASIC6.42□□□□□ -1.38
Trim47Q8C0E3 Gm4012-201ENSMUST00000221504 581 ntBASIC6.42□□□□□ -1.38
Trim47Q8C0E3 AC154552.1-201ENSMUST00000222969 202 ntBASIC6.42□□□□□ -1.38
Trim47Q8C0E3 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Trim47Q8C0E3 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Trim47Q8C0E3 Gm25482-201ENSMUST00000083225 107 ntBASIC6.42□□□□□ -1.38
Trim47Q8C0E3 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Trim47Q8C0E3 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
Trim47Q8C0E3 AC130827.1-201ENSMUST00000220476 3850 ntBASIC6.42□□□□□ -1.38
Trim47Q8C0E3 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Trim47Q8C0E3 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Trim47Q8C0E3 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Trim47Q8C0E3 Vmn2r61-201ENSMUST00000166131 2598 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Trim47Q8C0E3 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 98.9 ms