Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Trim12c-202ENSMUST00000130139 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Trim35Q8C006 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Trim35Q8C006 4930516K23Rik-201ENSMUST00000074064 6133 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Trim35Q8C006 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Trim35Q8C006 Gm20547-202ENSMUST00000146299 3893 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Trim35Q8C006 Pvt1-202ENSMUST00000181416 3319 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Trim35Q8C006 Gm25421-201ENSMUST00000104218 164 ntBASIC7.37□□□□□ -1.23
Trim35Q8C006 Gm24284-201ENSMUST00000104240 142 ntBASIC7.37□□□□□ -1.23
Trim35Q8C006 Gm23323-201ENSMUST00000104471 133 ntBASIC7.37□□□□□ -1.23
Trim35Q8C006 Gm11561-201ENSMUST00000117429 417 ntBASIC7.37□□□□□ -1.23
Trim35Q8C006 Gm8624-201ENSMUST00000118083 432 ntBASIC7.37□□□□□ -1.23
Trim35Q8C006 Gm13622-201ENSMUST00000120658 433 ntBASIC7.37□□□□□ -1.23
Trim35Q8C006 Gm22477-201ENSMUST00000122569 316 ntBASIC7.37□□□□□ -1.23
Trim35Q8C006 Gm26275-201ENSMUST00000157101 268 ntBASIC7.37□□□□□ -1.23
Trim35Q8C006 Gm22476-201ENSMUST00000158902 100 ntBASIC7.37□□□□□ -1.23
Trim35Q8C006 Gm23007-201ENSMUST00000158951 177 ntBASIC7.37□□□□□ -1.23
Trim35Q8C006 Gm23337-201ENSMUST00000158959 118 ntBASIC7.37□□□□□ -1.23
Trim35Q8C006 Gm20526-201ENSMUST00000173416 158 ntBASIC7.37□□□□□ -1.23
Trim35Q8C006 Gm28828-201ENSMUST00000186601 696 ntBASIC7.37□□□□□ -1.23
Trim35Q8C006 Gm43704-201ENSMUST00000196164 496 ntBASIC7.37□□□□□ -1.23
Trim35Q8C006 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC7.37□□□□□ -1.23
Trim35Q8C006 Igkv4-73-201ENSMUST00000199760 358 ntBASIC7.37□□□□□ -1.23
Trim35Q8C006 Gm45157-201ENSMUST00000208729 401 ntBASIC7.37□□□□□ -1.23
Trim35Q8C006 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC7.37□□□□□ -1.23
Trim35Q8C006 Gm45221-201ENSMUST00000207822 2272 ntBASIC7.37□□□□□ -1.23
Trim35Q8C006 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC7.37□□□□□ -1.23
Trim35Q8C006 Gm44535-201ENSMUST00000208889 3136 ntBASIC7.37□□□□□ -1.23
Trim35Q8C006 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Trim35Q8C006 Gm44220-201ENSMUST00000203784 2487 ntBASIC7.37□□□□□ -1.23
Trim35Q8C006 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Trim35Q8C006 Rp1-203ENSMUST00000208660 4170 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Trim35Q8C006 4921525O09Rik-201ENSMUST00000220691 3270 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Trim35Q8C006 Kif4-ps-201ENSMUST00000184686 3665 ntBASIC7.37□□□□□ -1.23
Trim35Q8C006 Gm44231-201ENSMUST00000204106 4075 ntBASIC7.37□□□□□ -1.23
Trim35Q8C006 Fryl-202ENSMUST00000101127 11340 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Trim35Q8C006 Vmn2r45-201ENSMUST00000164845 3619 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Trim35Q8C006 Olfr1023-202ENSMUST00000213441 4740 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Trim35Q8C006 Tlr1-202ENSMUST00000197315 3025 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Trim35Q8C006 Slc6a18-202ENSMUST00000109679 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Trim35Q8C006 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Trim35Q8C006 Tor1aip2-202ENSMUST00000065648 2529 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Trim35Q8C006 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Trim35Q8C006 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC7.36□□□□□ -1.23
Trim35Q8C006 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Trim35Q8C006 AC132852.2-201ENSMUST00000216052 2794 ntBASIC7.36□□□□□ -1.23
Trim35Q8C006 Mllt10-202ENSMUST00000114669 3865 ntTSL 5 BASIC7.36□□□□□ -1.23
Trim35Q8C006 Gm13229-201ENSMUST00000118238 340 ntBASIC7.36□□□□□ -1.23
Trim35Q8C006 Gm25164-201ENSMUST00000158908 116 ntBASIC7.36□□□□□ -1.23
Trim35Q8C006 Gm7418-201ENSMUST00000162120 801 ntBASIC7.36□□□□□ -1.23
Trim35Q8C006 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Trim35Q8C006 Nedd8-202ENSMUST00000163750 514 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Trim35Q8C006 Gm2026-203ENSMUST00000174416 532 ntTSL 3 BASIC7.36□□□□□ -1.23
Trim35Q8C006 Gm25692-201ENSMUST00000175444 125 ntBASIC7.36□□□□□ -1.23
Trim35Q8C006 Gm24923-201ENSMUST00000178201 88 ntBASIC7.36□□□□□ -1.23
Trim35Q8C006 Gm4785-201ENSMUST00000191025 751 ntBASIC7.36□□□□□ -1.23
Trim35Q8C006 Gm42424-201ENSMUST00000198319 376 ntBASIC7.36□□□□□ -1.23
Trim35Q8C006 Gm43033-201ENSMUST00000199682 425 ntBASIC7.36□□□□□ -1.23
Trim35Q8C006 Gm4668-201ENSMUST00000214742 943 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Trim35Q8C006 AC125539.2-202ENSMUST00000227983 587 ntBASIC7.36□□□□□ -1.23
Trim35Q8C006 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Trim35Q8C006 Gm23517-201ENSMUST00000082830 192 ntBASIC7.36□□□□□ -1.23
Trim35Q8C006 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC7.36□□□□□ -1.23
Trim35Q8C006 Gm10172-201ENSMUST00000085929 558 ntBASIC7.36□□□□□ -1.23
Trim35Q8C006 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Trim35Q8C006 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Trim35Q8C006 Gm37984-201ENSMUST00000191641 3733 ntBASIC7.36□□□□□ -1.23
Trim35Q8C006 Zbtb38-201ENSMUST00000093798 4091 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
Trim35Q8C006 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
Trim35Q8C006 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Trim35Q8C006 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Trim35Q8C006 Amer1-201ENSMUST00000084535 8496 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Trim35Q8C006 Pon3-201ENSMUST00000031773 1837 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Trim35Q8C006 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Trim35Q8C006 Gm5177-202ENSMUST00000183337 3785 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Trim35Q8C006 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Trim35Q8C006 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Trim35Q8C006 Adamts6-203ENSMUST00000224208 6480 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Trim35Q8C006 Gm28515-201ENSMUST00000189823 2530 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Trim35Q8C006 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC7.35□□□□□ -1.23
Trim35Q8C006 Cpa6-201ENSMUST00000035577 1932 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Trim35Q8C006 Apobec3-209ENSMUST00000176325 2765 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Trim35Q8C006 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Trim35Q8C006 Gm40055-201ENSMUST00000196091 2742 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Trim35Q8C006 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC7.35□□□□□ -1.23
Trim35Q8C006 Tln2-202ENSMUST00000040025 12132 ntAPPRIS P2 TSL 5 BASIC7.35□□□□□ -1.23
Trim35Q8C006 Gm23320-201ENSMUST00000104462 127 ntBASIC7.35□□□□□ -1.23
Trim35Q8C006 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Trim35Q8C006 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
Trim35Q8C006 Gm13504-201ENSMUST00000117490 316 ntBASIC7.35□□□□□ -1.23
Trim35Q8C006 Apc-ps1-201ENSMUST00000119356 470 ntBASIC7.35□□□□□ -1.23
Trim35Q8C006 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC7.35□□□□□ -1.23
Trim35Q8C006 Gm15586-201ENSMUST00000121218 528 ntBASIC7.35□□□□□ -1.23
Trim35Q8C006 Gm24481-201ENSMUST00000157210 102 ntBASIC7.35□□□□□ -1.23
Trim35Q8C006 Gm26403-201ENSMUST00000158500 105 ntBASIC7.35□□□□□ -1.23
Trim35Q8C006 Gm4340-201ENSMUST00000163113 807 ntAPPRIS ALT2 BASIC7.35□□□□□ -1.23
Trim35Q8C006 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC7.35□□□□□ -1.23
Trim35Q8C006 Olfr318-201ENSMUST00000189911 1026 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Trim35Q8C006 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Trim35Q8C006 Gm43214-201ENSMUST00000199242 352 ntBASIC7.35□□□□□ -1.23
Trim35Q8C006 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC7.35□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms