Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Mir1934-201ENSMUST00000158127 83 ntBASIC5.17□□□□□ -1.58
Usp47Q8BY87 Gm23257-201ENSMUST00000158322 132 ntBASIC5.17□□□□□ -1.58
Usp47Q8BY87 Gm26141-201ENSMUST00000175299 126 ntBASIC5.17□□□□□ -1.58
Usp47Q8BY87 Gm21638-201ENSMUST00000179473 836 ntBASIC5.17□□□□□ -1.58
Usp47Q8BY87 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Usp47Q8BY87 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Usp47Q8BY87 Gm36991-201ENSMUST00000191800 648 ntBASIC5.17□□□□□ -1.58
Usp47Q8BY87 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC5.17□□□□□ -1.58
Usp47Q8BY87 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC5.17□□□□□ -1.58
Usp47Q8BY87 AC153370.1-201ENSMUST00000220296 635 ntTSL 5 BASIC5.17□□□□□ -1.58
Usp47Q8BY87 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Usp47Q8BY87 Vmn1r80-201ENSMUST00000075053 927 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Usp47Q8BY87 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Usp47Q8BY87 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC5.17□□□□□ -1.58
Usp47Q8BY87 Gm42905-201ENSMUST00000196237 1611 ntBASIC5.17□□□□□ -1.58
Usp47Q8BY87 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
Usp47Q8BY87 Gm45066-201ENSMUST00000207528 2551 ntBASIC5.17□□□□□ -1.58
Usp47Q8BY87 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Usp47Q8BY87 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Usp47Q8BY87 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC5.17□□□□□ -1.58
Usp47Q8BY87 Gm29730-201ENSMUST00000192986 1396 ntBASIC5.17□□□□□ -1.58
Usp47Q8BY87 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Usp47Q8BY87 Gm22115-201ENSMUST00000103976 133 ntBASIC5.16□□□□□ -1.58
Usp47Q8BY87 Gm23923-201ENSMUST00000104108 133 ntBASIC5.16□□□□□ -1.58
Usp47Q8BY87 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC5.16□□□□□ -1.58
Usp47Q8BY87 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Usp47Q8BY87 Vmn1r117-201ENSMUST00000166937 924 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Usp47Q8BY87 Vmn1r128-201ENSMUST00000169165 924 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Usp47Q8BY87 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Usp47Q8BY87 Vmn1r143-201ENSMUST00000171622 924 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Usp47Q8BY87 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC5.16□□□□□ -1.58
Usp47Q8BY87 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC5.16□□□□□ -1.58
Usp47Q8BY87 Gm3454-201ENSMUST00000185571 412 ntBASIC5.16□□□□□ -1.58
Usp47Q8BY87 Gm5829-201ENSMUST00000191383 351 ntBASIC5.16□□□□□ -1.58
Usp47Q8BY87 AC126275.2-201ENSMUST00000225224 253 ntBASIC5.16□□□□□ -1.58
Usp47Q8BY87 Prl7c1-201ENSMUST00000072943 1016 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Usp47Q8BY87 Mir101b-201ENSMUST00000083622 97 ntBASIC5.16□□□□□ -1.58
Usp47Q8BY87 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
Usp47Q8BY87 Gm37056-201ENSMUST00000192141 1865 ntBASIC5.16□□□□□ -1.58
Usp47Q8BY87 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Usp47Q8BY87 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Usp47Q8BY87 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Usp47Q8BY87 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Usp47Q8BY87 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Usp47Q8BY87 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC5.16□□□□□ -1.58
Usp47Q8BY87 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Usp47Q8BY87 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Usp47Q8BY87 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC5.16□□□□□ -1.58
Usp47Q8BY87 Gm23667-201ENSMUST00000157466 120 ntBASIC5.16□□□□□ -1.58
Usp47Q8BY87 Gm25066-201ENSMUST00000158145 123 ntBASIC5.16□□□□□ -1.58
Usp47Q8BY87 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
Usp47Q8BY87 Gm6900-201ENSMUST00000178971 342 ntBASIC5.16□□□□□ -1.58
Usp47Q8BY87 Mir6938-201ENSMUST00000184173 63 ntBASIC5.16□□□□□ -1.58
Usp47Q8BY87 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Usp47Q8BY87 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Usp47Q8BY87 Gm37830-201ENSMUST00000195282 837 ntTSL 5 BASIC5.16□□□□□ -1.58
Usp47Q8BY87 Gm7639-201ENSMUST00000212608 484 ntBASIC5.16□□□□□ -1.58
Usp47Q8BY87 Gm25630-201ENSMUST00000084000 162 ntBASIC5.16□□□□□ -1.58
Usp47Q8BY87 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
Usp47Q8BY87 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Usp47Q8BY87 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC5.15□□□□□ -1.58
Usp47Q8BY87 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Usp47Q8BY87 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
Usp47Q8BY87 Gm14050-201ENSMUST00000117052 346 ntBASIC5.15□□□□□ -1.59
Usp47Q8BY87 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Usp47Q8BY87 Mup8-202ENSMUST00000163931 986 ntAPPRIS P3 TSL 5 BASIC5.15□□□□□ -1.59
Usp47Q8BY87 Gm24520-201ENSMUST00000179510 110 ntBASIC5.15□□□□□ -1.59
Usp47Q8BY87 Gm28064-201ENSMUST00000185639 858 ntBASIC5.15□□□□□ -1.59
Usp47Q8BY87 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Usp47Q8BY87 Gm42832-201ENSMUST00000196361 745 ntBASIC5.15□□□□□ -1.59
Usp47Q8BY87 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Usp47Q8BY87 Gm43941-201ENSMUST00000203303 1073 ntBASIC5.15□□□□□ -1.59
Usp47Q8BY87 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC5.15□□□□□ -1.59
Usp47Q8BY87 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC5.15□□□□□ -1.59
Usp47Q8BY87 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC5.15□□□□□ -1.59
Usp47Q8BY87 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC5.15□□□□□ -1.59
Usp47Q8BY87 Olfr1145-201ENSMUST00000079711 945 ntAPPRIS ALT2 BASIC5.15□□□□□ -1.59
Usp47Q8BY87 Olfr584-202ENSMUST00000214215 3152 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Usp47Q8BY87 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC5.14□□□□□ -1.59
Usp47Q8BY87 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Usp47Q8BY87 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Usp47Q8BY87 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Usp47Q8BY87 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Usp47Q8BY87 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Usp47Q8BY87 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC5.14□□□□□ -1.59
Usp47Q8BY87 Gm14383-201ENSMUST00000121637 386 ntBASIC5.14□□□□□ -1.59
Usp47Q8BY87 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC5.14□□□□□ -1.59
Usp47Q8BY87 Gm23123-201ENSMUST00000157648 144 ntBASIC5.14□□□□□ -1.59
Usp47Q8BY87 Gm24727-201ENSMUST00000158231 144 ntBASIC5.14□□□□□ -1.59
Usp47Q8BY87 Gm37698-201ENSMUST00000192605 463 ntBASIC5.14□□□□□ -1.59
Usp47Q8BY87 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC5.14□□□□□ -1.59
Usp47Q8BY87 Gm44681-201ENSMUST00000208447 842 ntBASIC5.14□□□□□ -1.59
Usp47Q8BY87 Gm17989-201ENSMUST00000211543 412 ntBASIC5.14□□□□□ -1.59
Usp47Q8BY87 Gm34005-201ENSMUST00000215834 282 ntBASIC5.14□□□□□ -1.59
Usp47Q8BY87 Olfr661-201ENSMUST00000098168 964 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Usp47Q8BY87 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Usp47Q8BY87 Gm42481-201ENSMUST00000196822 2178 ntBASIC5.14□□□□□ -1.59
Usp47Q8BY87 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Usp47Q8BY87 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
Usp47Q8BY87 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC5.13□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms