Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm20656-201ENSMUST00000176925 518 ntBASIC5.64□□□□□ -1.51
Sh3rf1Q69ZI1 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Sh3rf1Q69ZI1 Gm27409-201ENSMUST00000184727 80 ntBASIC5.64□□□□□ -1.51
Sh3rf1Q69ZI1 Gm9569-201ENSMUST00000187492 787 ntBASIC5.64□□□□□ -1.51
Sh3rf1Q69ZI1 Gm29159-201ENSMUST00000187969 379 ntBASIC5.64□□□□□ -1.51
Sh3rf1Q69ZI1 Gm28835-202ENSMUST00000189206 543 ntTSL 3 BASIC5.64□□□□□ -1.51
Sh3rf1Q69ZI1 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC5.64□□□□□ -1.51
Sh3rf1Q69ZI1 Gm37235-201ENSMUST00000195171 59 ntBASIC5.64□□□□□ -1.51
Sh3rf1Q69ZI1 Gm44316-201ENSMUST00000199274 97 ntBASIC5.64□□□□□ -1.51
Sh3rf1Q69ZI1 Gm2287-202ENSMUST00000199619 1000 ntBASIC5.64□□□□□ -1.51
Sh3rf1Q69ZI1 Gm43456-201ENSMUST00000202519 457 ntBASIC5.64□□□□□ -1.51
Sh3rf1Q69ZI1 Gm32453-201ENSMUST00000204183 456 ntBASIC5.64□□□□□ -1.51
Sh3rf1Q69ZI1 Gm45870-201ENSMUST00000211269 601 ntBASIC5.64□□□□□ -1.51
Sh3rf1Q69ZI1 Gm18120-201ENSMUST00000220079 511 ntBASIC5.64□□□□□ -1.51
Sh3rf1Q69ZI1 Gm18696-201ENSMUST00000220103 274 ntBASIC5.64□□□□□ -1.51
Sh3rf1Q69ZI1 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC5.64□□□□□ -1.51
Sh3rf1Q69ZI1 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC5.64□□□□□ -1.51
Sh3rf1Q69ZI1 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sh3rf1Q69ZI1 Gm23406-201ENSMUST00000082537 122 ntBASIC5.64□□□□□ -1.51
Sh3rf1Q69ZI1 Gm23737-201ENSMUST00000082547 159 ntBASIC5.64□□□□□ -1.51
Sh3rf1Q69ZI1 Gm21093-201ENSMUST00000084677 1710 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Sh3rf1Q69ZI1 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sh3rf1Q69ZI1 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
Sh3rf1Q69ZI1 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Sh3rf1Q69ZI1 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC5.64□□□□□ -1.51
Sh3rf1Q69ZI1 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Sh3rf1Q69ZI1 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 Gm20287-201ENSMUST00000172848 2367 ntBASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 Gm37485-201ENSMUST00000192326 2953 ntBASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 Gm14326-202ENSMUST00000108930 1807 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 Gm14220-201ENSMUST00000118114 449 ntBASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 Gm12448-201ENSMUST00000118852 655 ntBASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 Gm14731-201ENSMUST00000119216 376 ntBASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 Gm14128-201ENSMUST00000119514 1011 ntBASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 Gm4852-201ENSMUST00000121202 729 ntBASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 Gm1979-202ENSMUST00000170224 666 ntTSL 5 BASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 Mir5106-201ENSMUST00000174936 73 ntBASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 Gm25942-201ENSMUST00000180080 110 ntBASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 Gm26950-201ENSMUST00000182734 498 ntBASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 Gm28943-201ENSMUST00000186187 615 ntBASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 Gm28736-201ENSMUST00000186257 615 ntBASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 Gm29401-201ENSMUST00000186690 615 ntBASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 Gm29178-204ENSMUST00000186784 615 ntBASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 Gm28589-201ENSMUST00000186991 615 ntBASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 Gm28936-201ENSMUST00000187153 615 ntBASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 Gm18505-201ENSMUST00000187360 790 ntBASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 Gm29121-201ENSMUST00000187611 615 ntBASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 Gm28243-201ENSMUST00000187801 615 ntBASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 Gm28844-202ENSMUST00000187977 615 ntBASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 Gm29229-201ENSMUST00000188874 323 ntBASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 Gm29058-201ENSMUST00000189510 615 ntBASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 Gm29624-201ENSMUST00000190018 615 ntBASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 Gm28780-201ENSMUST00000190223 615 ntBASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 Gm28969-211ENSMUST00000190992 615 ntBASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 Gm28990-207ENSMUST00000191219 615 ntBASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 Gm36468-201ENSMUST00000192119 615 ntBASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 Gm31572-201ENSMUST00000193341 615 ntBASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 Gm30175-201ENSMUST00000194173 615 ntBASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 Gm28724-202ENSMUST00000194218 295 ntBASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 Gm30858-201ENSMUST00000195516 615 ntBASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 Gm17780-201ENSMUST00000207142 612 ntBASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 AC122332.1-201ENSMUST00000214384 285 ntBASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 Gm8672-201ENSMUST00000221200 332 ntBASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 AC161758.1-201ENSMUST00000226123 310 ntBASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 AC154467.1-201ENSMUST00000227527 449 ntBASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 n-R5s88-201ENSMUST00000083173 118 ntBASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 Gm24446-201ENSMUST00000083982 156 ntBASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 Gm37051-201ENSMUST00000194535 2943 ntBASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Sh3rf1Q69ZI1 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Sh3rf1Q69ZI1 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Sh3rf1Q69ZI1 AC134596.1-201ENSMUST00000222016 1922 ntBASIC5.62□□□□□ -1.51
Sh3rf1Q69ZI1 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Sh3rf1Q69ZI1 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Sh3rf1Q69ZI1 Gm43887-201ENSMUST00000204727 3186 ntBASIC5.62□□□□□ -1.51
Sh3rf1Q69ZI1 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Sh3rf1Q69ZI1 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms