Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Trim28Q62318 Gm5473-201ENSMUST00000179326 642 ntBASIC5.83□□□□□ -1.48
Trim28Q62318 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC5.83□□□□□ -1.48
Trim28Q62318 Gm38329-201ENSMUST00000193473 427 ntBASIC5.83□□□□□ -1.48
Trim28Q62318 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC5.83□□□□□ -1.48
Trim28Q62318 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC5.83□□□□□ -1.48
Trim28Q62318 Gm45171-201ENSMUST00000206360 736 ntBASIC5.83□□□□□ -1.48
Trim28Q62318 Gm19032-201ENSMUST00000208584 592 ntBASIC5.83□□□□□ -1.48
Trim28Q62318 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC5.83□□□□□ -1.48
Trim28Q62318 Gm17737-201ENSMUST00000210183 1147 ntBASIC5.83□□□□□ -1.48
Trim28Q62318 AC153541.1-201ENSMUST00000213786 294 ntBASIC5.83□□□□□ -1.48
Trim28Q62318 Gm39302-201ENSMUST00000215184 636 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Trim28Q62318 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC5.83□□□□□ -1.48
Trim28Q62318 AC192334.2-201ENSMUST00000223087 1091 ntBASIC5.83□□□□□ -1.48
Trim28Q62318 AC119241.1-201ENSMUST00000223651 534 ntBASIC5.83□□□□□ -1.48
Trim28Q62318 AC154657.1-201ENSMUST00000226394 775 ntBASIC5.83□□□□□ -1.48
Trim28Q62318 Csn1s2a-201ENSMUST00000076379 920 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
Trim28Q62318 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Trim28Q62318 Olfr774-201ENSMUST00000097164 939 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Trim28Q62318 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC5.83□□□□□ -1.48
Trim28Q62318 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Trim28Q62318 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Trim28Q62318 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Trim28Q62318 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Trim28Q62318 Olfr491-202ENSMUST00000209545 1944 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Trim28Q62318 AC120375.2-201ENSMUST00000226532 1853 ntBASIC5.83□□□□□ -1.48
Trim28Q62318 Gm43527-201ENSMUST00000198749 3178 ntBASIC5.83□□□□□ -1.48
Trim28Q62318 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Trim28Q62318 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Trim28Q62318 Gm2888-201ENSMUST00000170521 1758 ntAPPRIS P5 TSL 5 BASIC5.83□□□□□ -1.48
Trim28Q62318 Gm7876-202ENSMUST00000171305 1758 ntAPPRIS P5 TSL 5 BASIC5.83□□□□□ -1.48
Trim28Q62318 Gm45211-201ENSMUST00000206208 2650 ntBASIC5.82□□□□□ -1.48
Trim28Q62318 Gm15592-201ENSMUST00000143135 1707 ntTSL 3 BASIC5.82□□□□□ -1.48
Trim28Q62318 Gm37569-201ENSMUST00000192111 1722 ntBASIC5.82□□□□□ -1.48
Trim28Q62318 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC5.82□□□□□ -1.48
Trim28Q62318 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Trim28Q62318 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Trim28Q62318 Gm18491-201ENSMUST00000192492 1594 ntBASIC5.82□□□□□ -1.48
Trim28Q62318 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Trim28Q62318 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Trim28Q62318 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC5.82□□□□□ -1.48
Trim28Q62318 Gm8129-201ENSMUST00000118230 213 ntBASIC5.82□□□□□ -1.48
Trim28Q62318 Gm14360-201ENSMUST00000120670 393 ntBASIC5.82□□□□□ -1.48
Trim28Q62318 Gm11797-201ENSMUST00000121336 754 ntBASIC5.82□□□□□ -1.48
Trim28Q62318 Gm14903-201ENSMUST00000122435 537 ntBASIC5.82□□□□□ -1.48
Trim28Q62318 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC5.82□□□□□ -1.48
Trim28Q62318 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC5.82□□□□□ -1.48
Trim28Q62318 Mir6537-201ENSMUST00000184150 110 ntBASIC5.82□□□□□ -1.48
Trim28Q62318 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC5.82□□□□□ -1.48
Trim28Q62318 Gm21617-201ENSMUST00000188297 691 ntBASIC5.82□□□□□ -1.48
Trim28Q62318 Gm29263-201ENSMUST00000188718 463 ntBASIC5.82□□□□□ -1.48
Trim28Q62318 Gm29479-201ENSMUST00000190352 455 ntBASIC5.82□□□□□ -1.48
Trim28Q62318 Gm28803-201ENSMUST00000190385 764 ntBASIC5.82□□□□□ -1.48
Trim28Q62318 Gm30280-201ENSMUST00000192214 262 ntBASIC5.82□□□□□ -1.48
Trim28Q62318 Gm37288-201ENSMUST00000193963 334 ntBASIC5.82□□□□□ -1.48
Trim28Q62318 Gm42622-201ENSMUST00000197229 355 ntBASIC5.82□□□□□ -1.48
Trim28Q62318 Gm42818-201ENSMUST00000198869 987 ntBASIC5.82□□□□□ -1.48
Trim28Q62318 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Trim28Q62318 Gm44654-201ENSMUST00000208052 329 ntBASIC5.82□□□□□ -1.48
Trim28Q62318 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC5.82□□□□□ -1.48
Trim28Q62318 Olfr852-ps1-201ENSMUST00000212273 226 ntBASIC5.82□□□□□ -1.48
Trim28Q62318 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC5.82□□□□□ -1.48
Trim28Q62318 CR974429.1-201ENSMUST00000220877 827 ntBASIC5.82□□□□□ -1.48
Trim28Q62318 Gm46312-201ENSMUST00000220961 420 ntBASIC5.82□□□□□ -1.48
Trim28Q62318 AC174459.2-201ENSMUST00000226036 160 ntBASIC5.82□□□□□ -1.48
Trim28Q62318 AC131747.1-201ENSMUST00000226159 793 ntBASIC5.82□□□□□ -1.48
Trim28Q62318 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Trim28Q62318 Olfr1085-203ENSMUST00000214566 5129 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Trim28Q62318 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Trim28Q62318 Olfr690-202ENSMUST00000211006 2048 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
Trim28Q62318 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC5.82□□□□□ -1.48
Trim28Q62318 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Trim28Q62318 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Trim28Q62318 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC5.82□□□□□ -1.48
Trim28Q62318 Gm44587-201ENSMUST00000207399 1685 ntBASIC5.82□□□□□ -1.48
Trim28Q62318 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Trim28Q62318 Gm37789-201ENSMUST00000192862 2889 ntBASIC5.81□□□□□ -1.48
Trim28Q62318 Gm37356-201ENSMUST00000193362 1613 ntBASIC5.81□□□□□ -1.48
Trim28Q62318 Gm42946-201ENSMUST00000196108 2570 ntBASIC5.81□□□□□ -1.48
Trim28Q62318 Olfr391-ps-201ENSMUST00000214485 2080 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
Trim28Q62318 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC5.81□□□□□ -1.48
Trim28Q62318 AC142245.1-201ENSMUST00000226611 1505 ntBASIC5.81□□□□□ -1.48
Trim28Q62318 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Trim28Q62318 Gm14931-201ENSMUST00000111079 253 ntBASIC5.81□□□□□ -1.48
Trim28Q62318 Gm13751-201ENSMUST00000120280 752 ntBASIC5.81□□□□□ -1.48
Trim28Q62318 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC5.81□□□□□ -1.48
Trim28Q62318 Gm14907-201ENSMUST00000121948 854 ntBASIC5.81□□□□□ -1.48
Trim28Q62318 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Trim28Q62318 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC5.81□□□□□ -1.48
Trim28Q62318 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC5.81□□□□□ -1.48
Trim28Q62318 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Trim28Q62318 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC5.81□□□□□ -1.48
Trim28Q62318 Gm43476-201ENSMUST00000197873 405 ntBASIC5.81□□□□□ -1.48
Trim28Q62318 Gm44389-201ENSMUST00000203795 182 ntBASIC5.81□□□□□ -1.48
Trim28Q62318 Gm4045-201ENSMUST00000204076 310 ntBASIC5.81□□□□□ -1.48
Trim28Q62318 Gm44277-201ENSMUST00000205128 649 ntBASIC5.81□□□□□ -1.48
Trim28Q62318 Gm18462-201ENSMUST00000208112 417 ntBASIC5.81□□□□□ -1.48
Trim28Q62318 Sult2a7-202ENSMUST00000209744 792 ntTSL 5 BASIC5.81□□□□□ -1.48
Trim28Q62318 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Trim28Q62318 Gm19709-201ENSMUST00000215403 482 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms