Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Gm44402-201ENSMUST00000203677 238 ntBASIC4.24□□□□□ -1.73
Sox17Q61473 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC4.24□□□□□ -1.73
Sox17Q61473 Gm36371-201ENSMUST00000209043 1103 ntBASIC4.24□□□□□ -1.73
Sox17Q61473 Gm18645-201ENSMUST00000209593 651 ntBASIC4.24□□□□□ -1.73
Sox17Q61473 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC4.24□□□□□ -1.73
Sox17Q61473 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC4.24□□□□□ -1.73
Sox17Q61473 CT025617.1-201ENSMUST00000216487 725 ntTSL 5 BASIC4.24□□□□□ -1.73
Sox17Q61473 AC116726.2-201ENSMUST00000217629 986 ntBASIC4.24□□□□□ -1.73
Sox17Q61473 CR974592.1-201ENSMUST00000220422 574 ntBASIC4.24□□□□□ -1.73
Sox17Q61473 AC161884.2-201ENSMUST00000224513 227 ntBASIC4.24□□□□□ -1.73
Sox17Q61473 AC131085.1-201ENSMUST00000224746 656 ntBASIC4.24□□□□□ -1.73
Sox17Q61473 AC154335.2-201ENSMUST00000225916 638 ntBASIC4.24□□□□□ -1.73
Sox17Q61473 AC166574.3-201ENSMUST00000226725 367 ntBASIC4.24□□□□□ -1.73
Sox17Q61473 AC167013.2-202ENSMUST00000227035 333 ntBASIC4.24□□□□□ -1.73
Sox17Q61473 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Sox17Q61473 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Sox17Q61473 Gm7665-201ENSMUST00000076710 297 ntBASIC4.24□□□□□ -1.73
Sox17Q61473 Mir215-201ENSMUST00000083628 112 ntBASIC4.24□□□□□ -1.73
Sox17Q61473 Mir218-2-201ENSMUST00000083649 110 ntBASIC4.24□□□□□ -1.73
Sox17Q61473 n-R5s152-201ENSMUST00000093641 119 ntBASIC4.24□□□□□ -1.73
Sox17Q61473 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Sox17Q61473 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC4.24□□□□□ -1.73
Sox17Q61473 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Sox17Q61473 Gm38057-201ENSMUST00000195551 3203 ntBASIC4.24□□□□□ -1.73
Sox17Q61473 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Sox17Q61473 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
Sox17Q61473 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Sox17Q61473 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Sox17Q61473 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Sox17Q61473 Hbp1-204ENSMUST00000175686 1315 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Sox17Q61473 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Sox17Q61473 Gm44860-201ENSMUST00000208473 2346 ntBASIC4.23□□□□□ -1.73
Sox17Q61473 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
Sox17Q61473 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Sox17Q61473 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Sox17Q61473 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
Sox17Q61473 Gm24124-201ENSMUST00000104103 132 ntBASIC4.23□□□□□ -1.73
Sox17Q61473 Mir105-201ENSMUST00000104655 80 ntBASIC4.23□□□□□ -1.73
Sox17Q61473 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Sox17Q61473 Gm15176-201ENSMUST00000117734 135 ntBASIC4.23□□□□□ -1.73
Sox17Q61473 Gm12571-201ENSMUST00000118132 243 ntBASIC4.23□□□□□ -1.73
Sox17Q61473 Gm14500-201ENSMUST00000121647 113 ntBASIC4.23□□□□□ -1.73
Sox17Q61473 Gm15212-201ENSMUST00000122403 466 ntBASIC4.23□□□□□ -1.73
Sox17Q61473 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC4.23□□□□□ -1.73
Sox17Q61473 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC4.23□□□□□ -1.73
Sox17Q61473 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Sox17Q61473 Gm10319-202ENSMUST00000159439 846 ntBASIC4.23□□□□□ -1.73
Sox17Q61473 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Sox17Q61473 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Sox17Q61473 Gm7346-201ENSMUST00000169661 476 ntBASIC4.23□□□□□ -1.73
Sox17Q61473 Gm20428-201ENSMUST00000174365 283 ntBASIC4.23□□□□□ -1.73
Sox17Q61473 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC4.23□□□□□ -1.73
Sox17Q61473 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC4.23□□□□□ -1.73
Sox17Q61473 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Sox17Q61473 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC4.23□□□□□ -1.73
Sox17Q61473 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC4.23□□□□□ -1.73
Sox17Q61473 Gm26828-201ENSMUST00000180640 172 ntBASIC4.23□□□□□ -1.73
Sox17Q61473 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC4.23□□□□□ -1.73
Sox17Q61473 Gm37771-201ENSMUST00000193121 265 ntBASIC4.23□□□□□ -1.73
Sox17Q61473 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC4.23□□□□□ -1.73
Sox17Q61473 Gm9632-201ENSMUST00000195934 643 ntBASIC4.23□□□□□ -1.73
Sox17Q61473 Gm43586-201ENSMUST00000195948 310 ntBASIC4.23□□□□□ -1.73
Sox17Q61473 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC4.23□□□□□ -1.73
Sox17Q61473 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC4.23□□□□□ -1.73
Sox17Q61473 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC4.23□□□□□ -1.73
Sox17Q61473 Gm19599-201ENSMUST00000218898 358 ntBASIC4.23□□□□□ -1.73
Sox17Q61473 Olfr790-204ENSMUST00000218901 1070 ntBASIC4.23□□□□□ -1.73
Sox17Q61473 AC158803.3-201ENSMUST00000220024 211 ntBASIC4.23□□□□□ -1.73
Sox17Q61473 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC4.23□□□□□ -1.73
Sox17Q61473 AC154257.2-201ENSMUST00000224166 340 ntBASIC4.23□□□□□ -1.73
Sox17Q61473 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC4.23□□□□□ -1.73
Sox17Q61473 AC113031.2-201ENSMUST00000226132 579 ntBASIC4.23□□□□□ -1.73
Sox17Q61473 Olfr790-201ENSMUST00000056002 1070 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Sox17Q61473 Olfr798-201ENSMUST00000079810 936 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Sox17Q61473 Mir504-201ENSMUST00000093602 79 ntBASIC4.23□□□□□ -1.73
Sox17Q61473 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC4.23□□□□□ -1.73
Sox17Q61473 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Sox17Q61473 Gm45517-201ENSMUST00000209973 2468 ntBASIC4.23□□□□□ -1.73
Sox17Q61473 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Sox17Q61473 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Sox17Q61473 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Sox17Q61473 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Sox17Q61473 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
Sox17Q61473 AC124446.1-201ENSMUST00000221027 2644 ntBASIC4.23□□□□□ -1.73
Sox17Q61473 Gm32444-201ENSMUST00000195147 3511 ntBASIC4.22□□□□□ -1.73
Sox17Q61473 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Sox17Q61473 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Sox17Q61473 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Sox17Q61473 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Sox17Q61473 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Sox17Q61473 4930510E17Rik-201ENSMUST00000034550 1639 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Sox17Q61473 Olfr874-202ENSMUST00000216982 2632 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Sox17Q61473 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC4.22□□□□□ -1.73
Sox17Q61473 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Sox17Q61473 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Sox17Q61473 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Sox17Q61473 Gm22370-201ENSMUST00000102422 83 ntBASIC4.22□□□□□ -1.73
Sox17Q61473 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Sox17Q61473 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Sox17Q61473 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms