Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Shank3Q4ACU6 Gm37461-201ENSMUST00000193929 3704 ntBASIC4.72□□□□□ -1.65
Shank3Q4ACU6 Gm22472-201ENSMUST00000104115 134 ntBASIC4.72□□□□□ -1.65
Shank3Q4ACU6 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC4.72□□□□□ -1.65
Shank3Q4ACU6 Gm16005-201ENSMUST00000120515 269 ntBASIC4.72□□□□□ -1.65
Shank3Q4ACU6 Gm26020-201ENSMUST00000122729 183 ntBASIC4.72□□□□□ -1.65
Shank3Q4ACU6 AC117237.1-201ENSMUST00000224035 395 ntBASIC4.72□□□□□ -1.65
Shank3Q4ACU6 Snord35b-201ENSMUST00000082833 87 ntBASIC4.72□□□□□ -1.65
Shank3Q4ACU6 Gm43032-201ENSMUST00000197967 3123 ntBASIC4.72□□□□□ -1.65
Shank3Q4ACU6 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Shank3Q4ACU6 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Shank3Q4ACU6 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
Shank3Q4ACU6 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Shank3Q4ACU6 AI662270-201ENSMUST00000142709 304 ntTSL 2 BASIC4.72□□□□□ -1.65
Shank3Q4ACU6 Gm16303-201ENSMUST00000161498 390 ntBASIC4.72□□□□□ -1.65
Shank3Q4ACU6 Gm28186-201ENSMUST00000187447 679 ntBASIC4.72□□□□□ -1.65
Shank3Q4ACU6 Gm7837-201ENSMUST00000190873 412 ntBASIC4.72□□□□□ -1.65
Shank3Q4ACU6 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
Shank3Q4ACU6 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC4.72□□□□□ -1.65
Shank3Q4ACU6 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC4.72□□□□□ -1.65
Shank3Q4ACU6 Olfr938-201ENSMUST00000056499 1190 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Shank3Q4ACU6 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Shank3Q4ACU6 Vmn2r57-201ENSMUST00000165029 2592 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
Shank3Q4ACU6 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC4.71□□□□□ -1.65
Shank3Q4ACU6 Gm37298-201ENSMUST00000193770 3868 ntBASIC4.71□□□□□ -1.65
Shank3Q4ACU6 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Shank3Q4ACU6 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Shank3Q4ACU6 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Shank3Q4ACU6 Gm12005-201ENSMUST00000121451 379 ntBASIC4.71□□□□□ -1.66
Shank3Q4ACU6 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
Shank3Q4ACU6 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC4.71□□□□□ -1.66
Shank3Q4ACU6 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
Shank3Q4ACU6 Gm28924-201ENSMUST00000190012 241 ntBASIC4.71□□□□□ -1.66
Shank3Q4ACU6 Gm42486-201ENSMUST00000200369 3486 ntBASIC4.71□□□□□ -1.66
Shank3Q4ACU6 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Shank3Q4ACU6 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Shank3Q4ACU6 AC131068.3-201ENSMUST00000228438 1456 ntBASIC4.7□□□□□ -1.66
Shank3Q4ACU6 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Shank3Q4ACU6 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Shank3Q4ACU6 Gm9119-201ENSMUST00000118866 495 ntBASIC4.7□□□□□ -1.66
Shank3Q4ACU6 Gm24898-201ENSMUST00000158133 106 ntBASIC4.7□□□□□ -1.66
Shank3Q4ACU6 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC4.7□□□□□ -1.66
Shank3Q4ACU6 Gm22859-201ENSMUST00000174978 122 ntBASIC4.7□□□□□ -1.66
Shank3Q4ACU6 Gm6075-201ENSMUST00000186816 486 ntBASIC4.7□□□□□ -1.66
Shank3Q4ACU6 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Shank3Q4ACU6 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC4.7□□□□□ -1.66
Shank3Q4ACU6 Gm19596-201ENSMUST00000203685 739 ntBASIC4.7□□□□□ -1.66
Shank3Q4ACU6 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC4.7□□□□□ -1.66
Shank3Q4ACU6 Olfr1244-ps1-201ENSMUST00000213226 683 ntBASIC4.7□□□□□ -1.66
Shank3Q4ACU6 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC4.7□□□□□ -1.66
Shank3Q4ACU6 Gm21007-201ENSMUST00000221024 326 ntBASIC4.7□□□□□ -1.66
Shank3Q4ACU6 Gm23302-201ENSMUST00000082710 100 ntBASIC4.7□□□□□ -1.66
Shank3Q4ACU6 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Shank3Q4ACU6 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Shank3Q4ACU6 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Shank3Q4ACU6 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Shank3Q4ACU6 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Shank3Q4ACU6 Gm11673-201ENSMUST00000117846 331 ntBASIC4.69□□□□□ -1.66
Shank3Q4ACU6 Gm15212-201ENSMUST00000122403 466 ntBASIC4.69□□□□□ -1.66
Shank3Q4ACU6 Gm26254-201ENSMUST00000122491 118 ntBASIC4.69□□□□□ -1.66
Shank3Q4ACU6 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC4.69□□□□□ -1.66
Shank3Q4ACU6 Gm18900-201ENSMUST00000193218 584 ntBASIC4.69□□□□□ -1.66
Shank3Q4ACU6 Gm19030-201ENSMUST00000194947 552 ntBASIC4.69□□□□□ -1.66
Shank3Q4ACU6 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC4.69□□□□□ -1.66
Shank3Q4ACU6 Gm19232-201ENSMUST00000211621 652 ntBASIC4.69□□□□□ -1.66
Shank3Q4ACU6 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Shank3Q4ACU6 AC107864.1-201ENSMUST00000217937 496 ntBASIC4.69□□□□□ -1.66
Shank3Q4ACU6 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC4.69□□□□□ -1.66
Shank3Q4ACU6 Gm9370-201ENSMUST00000222787 609 ntBASIC4.69□□□□□ -1.66
Shank3Q4ACU6 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC4.69□□□□□ -1.66
Shank3Q4ACU6 Olfr168-202ENSMUST00000213480 2205 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Shank3Q4ACU6 Gm42481-201ENSMUST00000196822 2178 ntBASIC4.69□□□□□ -1.66
Shank3Q4ACU6 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Shank3Q4ACU6 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Shank3Q4ACU6 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Shank3Q4ACU6 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Shank3Q4ACU6 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC4.69□□□□□ -1.66
Shank3Q4ACU6 Gm12358-201ENSMUST00000121842 520 ntBASIC4.69□□□□□ -1.66
Shank3Q4ACU6 Gm24936-201ENSMUST00000122598 247 ntBASIC4.69□□□□□ -1.66
Shank3Q4ACU6 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Shank3Q4ACU6 Gm44084-201ENSMUST00000203947 409 ntBASIC4.69□□□□□ -1.66
Shank3Q4ACU6 Gm44927-201ENSMUST00000207573 716 ntBASIC4.69□□□□□ -1.66
Shank3Q4ACU6 AC153544.1-201ENSMUST00000217988 400 ntBASIC4.69□□□□□ -1.66
Shank3Q4ACU6 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Shank3Q4ACU6 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Shank3Q4ACU6 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Shank3Q4ACU6 Gm38706-201ENSMUST00000182397 2617 ntBASIC4.68□□□□□ -1.66
Shank3Q4ACU6 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Shank3Q4ACU6 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Shank3Q4ACU6 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC4.68□□□□□ -1.66
Shank3Q4ACU6 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Shank3Q4ACU6 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Shank3Q4ACU6 Gm7258-201ENSMUST00000179317 300 ntBASIC4.68□□□□□ -1.66
Shank3Q4ACU6 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC4.68□□□□□ -1.66
Shank3Q4ACU6 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Shank3Q4ACU6 Gm44371-201ENSMUST00000204148 467 ntBASIC4.68□□□□□ -1.66
Shank3Q4ACU6 AC118230.1-201ENSMUST00000220196 656 ntBASIC4.68□□□□□ -1.66
Shank3Q4ACU6 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC4.68□□□□□ -1.66
Shank3Q4ACU6 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Shank3Q4ACU6 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC4.68□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms