Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Upf3bQ3ULL6 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC4.13□□□□□ -1.75
Upf3bQ3ULL6 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Upf3bQ3ULL6 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC4.13□□□□□ -1.75
Upf3bQ3ULL6 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Upf3bQ3ULL6 Gm23957-201ENSMUST00000157209 90 ntBASIC4.13□□□□□ -1.75
Upf3bQ3ULL6 Gm25436-201ENSMUST00000158275 145 ntBASIC4.13□□□□□ -1.75
Upf3bQ3ULL6 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Upf3bQ3ULL6 Gm17711-201ENSMUST00000172028 237 ntBASIC4.13□□□□□ -1.75
Upf3bQ3ULL6 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Upf3bQ3ULL6 Mir3104-201ENSMUST00000174911 63 ntBASIC4.13□□□□□ -1.75
Upf3bQ3ULL6 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC4.13□□□□□ -1.75
Upf3bQ3ULL6 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Upf3bQ3ULL6 Gm21742-201ENSMUST00000189352 548 ntBASIC4.13□□□□□ -1.75
Upf3bQ3ULL6 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Upf3bQ3ULL6 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC4.13□□□□□ -1.75
Upf3bQ3ULL6 AC154510.1-201ENSMUST00000223925 737 ntBASIC4.13□□□□□ -1.75
Upf3bQ3ULL6 AC144798.1-201ENSMUST00000228120 391 ntBASIC4.13□□□□□ -1.75
Upf3bQ3ULL6 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
Upf3bQ3ULL6 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Upf3bQ3ULL6 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Upf3bQ3ULL6 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Upf3bQ3ULL6 Tas2r121-201ENSMUST00000095395 918 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Upf3bQ3ULL6 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC4.13□□□□□ -1.75
Upf3bQ3ULL6 Gm38104-201ENSMUST00000195121 1895 ntBASIC4.13□□□□□ -1.75
Upf3bQ3ULL6 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Upf3bQ3ULL6 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC4.13□□□□□ -1.75
Upf3bQ3ULL6 AC124572.2-201ENSMUST00000218041 5152 ntBASIC4.12□□□□□ -1.75
Upf3bQ3ULL6 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Upf3bQ3ULL6 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.75
Upf3bQ3ULL6 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
Upf3bQ3ULL6 Gm44434-201ENSMUST00000203918 3745 ntBASIC4.12□□□□□ -1.75
Upf3bQ3ULL6 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Upf3bQ3ULL6 Gm12401-201ENSMUST00000118435 228 ntBASIC4.12□□□□□ -1.75
Upf3bQ3ULL6 Gm7219-201ENSMUST00000119619 297 ntBASIC4.12□□□□□ -1.75
Upf3bQ3ULL6 Gm14875-201ENSMUST00000120881 319 ntBASIC4.12□□□□□ -1.75
Upf3bQ3ULL6 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC4.12□□□□□ -1.75
Upf3bQ3ULL6 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC4.12□□□□□ -1.75
Upf3bQ3ULL6 Gm22789-201ENSMUST00000157884 130 ntBASIC4.12□□□□□ -1.75
Upf3bQ3ULL6 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC4.12□□□□□ -1.75
Upf3bQ3ULL6 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC4.12□□□□□ -1.75
Upf3bQ3ULL6 Gm27864-201ENSMUST00000183704 190 ntBASIC4.12□□□□□ -1.75
Upf3bQ3ULL6 Mir6938-201ENSMUST00000184173 63 ntBASIC4.12□□□□□ -1.75
Upf3bQ3ULL6 Gm8498-201ENSMUST00000188227 974 ntBASIC4.12□□□□□ -1.75
Upf3bQ3ULL6 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Upf3bQ3ULL6 Gm37934-201ENSMUST00000192902 402 ntBASIC4.12□□□□□ -1.75
Upf3bQ3ULL6 AI506816-203ENSMUST00000198461 503 ntTSL 5 BASIC4.12□□□□□ -1.75
Upf3bQ3ULL6 Gm44099-201ENSMUST00000203299 112 ntBASIC4.12□□□□□ -1.75
Upf3bQ3ULL6 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC4.12□□□□□ -1.75
Upf3bQ3ULL6 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Upf3bQ3ULL6 AC158641.1-201ENSMUST00000218933 229 ntBASIC4.12□□□□□ -1.75
Upf3bQ3ULL6 AC173345.3-201ENSMUST00000221245 1093 ntBASIC4.12□□□□□ -1.75
Upf3bQ3ULL6 AC154851.2-201ENSMUST00000222172 644 ntBASIC4.12□□□□□ -1.75
Upf3bQ3ULL6 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC4.12□□□□□ -1.75
Upf3bQ3ULL6 AC154838.1-201ENSMUST00000228944 911 ntBASIC4.12□□□□□ -1.75
Upf3bQ3ULL6 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Upf3bQ3ULL6 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Upf3bQ3ULL6 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC4.12□□□□□ -1.75
Upf3bQ3ULL6 Gm23677-201ENSMUST00000083156 104 ntBASIC4.12□□□□□ -1.75
Upf3bQ3ULL6 Olfr1180-201ENSMUST00000099824 1063 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Upf3bQ3ULL6 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Upf3bQ3ULL6 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC4.12□□□□□ -1.75
Upf3bQ3ULL6 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Upf3bQ3ULL6 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Upf3bQ3ULL6 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Upf3bQ3ULL6 Olfr1457-203ENSMUST00000214561 1829 ntTSL 5 BASIC4.11□□□□□ -1.75
Upf3bQ3ULL6 Olfr1049-202ENSMUST00000216185 1471 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Upf3bQ3ULL6 Gm37045-201ENSMUST00000192016 2463 ntBASIC4.11□□□□□ -1.75
Upf3bQ3ULL6 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC4.11□□□□□ -1.75
Upf3bQ3ULL6 Gm14103-201ENSMUST00000119075 366 ntBASIC4.11□□□□□ -1.75
Upf3bQ3ULL6 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Upf3bQ3ULL6 Gm6058-201ENSMUST00000154261 399 ntBASIC4.11□□□□□ -1.75
Upf3bQ3ULL6 Gm22219-201ENSMUST00000157562 319 ntBASIC4.11□□□□□ -1.75
Upf3bQ3ULL6 Gm23753-201ENSMUST00000157575 149 ntBASIC4.11□□□□□ -1.75
Upf3bQ3ULL6 Gm10074-201ENSMUST00000174543 249 ntBASIC4.11□□□□□ -1.75
Upf3bQ3ULL6 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Upf3bQ3ULL6 Gm5372-201ENSMUST00000187540 409 ntBASIC4.11□□□□□ -1.75
Upf3bQ3ULL6 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC4.11□□□□□ -1.75
Upf3bQ3ULL6 Gm19774-201ENSMUST00000190667 114 ntBASIC4.11□□□□□ -1.75
Upf3bQ3ULL6 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC4.11□□□□□ -1.75
Upf3bQ3ULL6 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC4.11□□□□□ -1.75
Upf3bQ3ULL6 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC4.11□□□□□ -1.75
Upf3bQ3ULL6 Gm18899-201ENSMUST00000217663 546 ntBASIC4.11□□□□□ -1.75
Upf3bQ3ULL6 AC129219.3-201ENSMUST00000223790 196 ntBASIC4.11□□□□□ -1.75
Upf3bQ3ULL6 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Upf3bQ3ULL6 AC099612.2-201ENSMUST00000226824 721 ntBASIC4.11□□□□□ -1.75
Upf3bQ3ULL6 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Upf3bQ3ULL6 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Upf3bQ3ULL6 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC4.11□□□□□ -1.75
Upf3bQ3ULL6 Mir346-201ENSMUST00000083547 98 ntBASIC4.11□□□□□ -1.75
Upf3bQ3ULL6 Gm43751-201ENSMUST00000200275 3071 ntBASIC4.11□□□□□ -1.75
Upf3bQ3ULL6 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Upf3bQ3ULL6 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Upf3bQ3ULL6 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
Upf3bQ3ULL6 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Upf3bQ3ULL6 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Upf3bQ3ULL6 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
Upf3bQ3ULL6 Gm5347-201ENSMUST00000210542 2327 ntBASIC4.1□□□□□ -1.75
Upf3bQ3ULL6 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
Upf3bQ3ULL6 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC4.1□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms