Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Gm13170-201ENSMUST00000119716 643 ntBASIC5.37□□□□□ -1.55
Sox9Q04887 Gm13452-201ENSMUST00000120896 1097 ntBASIC5.37□□□□□ -1.55
Sox9Q04887 Gm2768-201ENSMUST00000121062 250 ntBASIC5.37□□□□□ -1.55
Sox9Q04887 Gm25103-201ENSMUST00000122671 318 ntBASIC5.37□□□□□ -1.55
Sox9Q04887 Gm16274-201ENSMUST00000139251 592 ntBASIC5.37□□□□□ -1.55
Sox9Q04887 Mup-ps2-201ENSMUST00000142602 533 ntBASIC5.37□□□□□ -1.55
Sox9Q04887 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC5.37□□□□□ -1.55
Sox9Q04887 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Sox9Q04887 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC5.37□□□□□ -1.55
Sox9Q04887 Gm6872-201ENSMUST00000165001 700 ntBASIC5.37□□□□□ -1.55
Sox9Q04887 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
Sox9Q04887 Gm22177-201ENSMUST00000175002 158 ntBASIC5.37□□□□□ -1.55
Sox9Q04887 Gm20612-201ENSMUST00000176318 236 ntBASIC5.37□□□□□ -1.55
Sox9Q04887 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Sox9Q04887 Gm7398-201ENSMUST00000178589 639 ntBASIC5.37□□□□□ -1.55
Sox9Q04887 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Sox9Q04887 Gm7375-201ENSMUST00000179232 639 ntBASIC5.37□□□□□ -1.55
Sox9Q04887 Gm3681-201ENSMUST00000179940 639 ntBASIC5.37□□□□□ -1.55
Sox9Q04887 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Sox9Q04887 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC5.37□□□□□ -1.55
Sox9Q04887 Gm28802-201ENSMUST00000188624 944 ntBASIC5.37□□□□□ -1.55
Sox9Q04887 Gm18296-201ENSMUST00000192475 783 ntBASIC5.37□□□□□ -1.55
Sox9Q04887 Gm43142-201ENSMUST00000198670 361 ntBASIC5.37□□□□□ -1.55
Sox9Q04887 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC5.37□□□□□ -1.55
Sox9Q04887 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC5.37□□□□□ -1.55
Sox9Q04887 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC5.37□□□□□ -1.55
Sox9Q04887 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Sox9Q04887 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC5.37□□□□□ -1.55
Sox9Q04887 mt-Tr-201ENSMUST00000082412 68 ntBASIC5.37□□□□□ -1.55
Sox9Q04887 Gm23970-201ENSMUST00000083319 107 ntBASIC5.37□□□□□ -1.55
Sox9Q04887 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Sox9Q04887 Gm43359-201ENSMUST00000197944 2200 ntBASIC5.37□□□□□ -1.55
Sox9Q04887 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Sox9Q04887 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Sox9Q04887 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Sox9Q04887 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
Sox9Q04887 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Sox9Q04887 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC5.36□□□□□ -1.55
Sox9Q04887 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Sox9Q04887 AC116726.1-201ENSMUST00000215028 3497 ntBASIC5.36□□□□□ -1.55
Sox9Q04887 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
Sox9Q04887 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Sox9Q04887 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Sox9Q04887 Gm12285-201ENSMUST00000117347 233 ntBASIC5.36□□□□□ -1.55
Sox9Q04887 Gm7834-201ENSMUST00000117560 437 ntBASIC5.36□□□□□ -1.55
Sox9Q04887 Gm15113-201ENSMUST00000119280 836 ntBASIC5.36□□□□□ -1.55
Sox9Q04887 Gm11512-201ENSMUST00000119669 663 ntBASIC5.36□□□□□ -1.55
Sox9Q04887 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC5.36□□□□□ -1.55
Sox9Q04887 Mup-ps17-201ENSMUST00000120723 218 ntBASIC5.36□□□□□ -1.55
Sox9Q04887 Gm22080-201ENSMUST00000157591 106 ntBASIC5.36□□□□□ -1.55
Sox9Q04887 Scarna10-201ENSMUST00000158992 325 ntBASIC5.36□□□□□ -1.55
Sox9Q04887 Ear-ps9-201ENSMUST00000161963 460 ntBASIC5.36□□□□□ -1.55
Sox9Q04887 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
Sox9Q04887 Gm20673-201ENSMUST00000177167 430 ntBASIC5.36□□□□□ -1.55
Sox9Q04887 Mir6414-201ENSMUST00000183685 82 ntBASIC5.36□□□□□ -1.55
Sox9Q04887 Mir7047-201ENSMUST00000184595 64 ntBASIC5.36□□□□□ -1.55
Sox9Q04887 Gm28468-201ENSMUST00000188536 615 ntBASIC5.36□□□□□ -1.55
Sox9Q04887 Gm43070-201ENSMUST00000196938 415 ntBASIC5.36□□□□□ -1.55
Sox9Q04887 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC5.36□□□□□ -1.55
Sox9Q04887 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC5.36□□□□□ -1.55
Sox9Q04887 Gm18672-201ENSMUST00000208035 270 ntBASIC5.36□□□□□ -1.55
Sox9Q04887 Gm45910-201ENSMUST00000212493 1003 ntBASIC5.36□□□□□ -1.55
Sox9Q04887 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC5.36□□□□□ -1.55
Sox9Q04887 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC5.36□□□□□ -1.55
Sox9Q04887 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC5.36□□□□□ -1.55
Sox9Q04887 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Sox9Q04887 Gm3565-201ENSMUST00000222670 609 ntBASIC5.36□□□□□ -1.55
Sox9Q04887 AC125405.1-201ENSMUST00000226406 589 ntBASIC5.36□□□□□ -1.55
Sox9Q04887 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Sox9Q04887 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC5.36□□□□□ -1.55
Sox9Q04887 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Sox9Q04887 n-R5s79-201ENSMUST00000083071 120 ntBASIC5.36□□□□□ -1.55
Sox9Q04887 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Sox9Q04887 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Sox9Q04887 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Sox9Q04887 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Sox9Q04887 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Sox9Q04887 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
Sox9Q04887 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Sox9Q04887 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC5.35□□□□□ -1.55
Sox9Q04887 Olfr300-ps1-201ENSMUST00000174262 2395 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Sox9Q04887 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Sox9Q04887 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC5.35□□□□□ -1.55
Sox9Q04887 Gm15592-201ENSMUST00000143135 1707 ntTSL 3 BASIC5.35□□□□□ -1.55
Sox9Q04887 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
Sox9Q04887 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Sox9Q04887 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Sox9Q04887 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC5.35□□□□□ -1.55
Sox9Q04887 Gm42606-201ENSMUST00000114209 239 ntBASIC5.35□□□□□ -1.55
Sox9Q04887 Gm12112-201ENSMUST00000117772 231 ntBASIC5.35□□□□□ -1.55
Sox9Q04887 Gm14656-201ENSMUST00000120342 502 ntBASIC5.35□□□□□ -1.55
Sox9Q04887 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC5.35□□□□□ -1.55
Sox9Q04887 Gm14775-201ENSMUST00000122089 310 ntBASIC5.35□□□□□ -1.55
Sox9Q04887 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC5.35□□□□□ -1.55
Sox9Q04887 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Sox9Q04887 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Sox9Q04887 Gm22076-201ENSMUST00000158601 84 ntBASIC5.35□□□□□ -1.55
Sox9Q04887 Mir6341-201ENSMUST00000183490 121 ntBASIC5.35□□□□□ -1.55
Sox9Q04887 Gm17777-201ENSMUST00000189740 1276 ntBASIC5.35□□□□□ -1.55
Sox9Q04887 Gm19694-201ENSMUST00000192364 505 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms