Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 n-R5s151-201ENSMUST00000083959 119 ntBASIC4.25□□□□□ -1.73
Gabpb1Q00420 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Gabpb1Q00420 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Gabpb1Q00420 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
Gabpb1Q00420 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Gabpb1Q00420 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Gabpb1Q00420 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
Gabpb1Q00420 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Gabpb1Q00420 Gm38269-201ENSMUST00000194549 3298 ntBASIC4.25□□□□□ -1.73
Gabpb1Q00420 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC4.25□□□□□ -1.73
Gabpb1Q00420 Gm38010-201ENSMUST00000192592 2784 ntBASIC4.25□□□□□ -1.73
Gabpb1Q00420 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Gabpb1Q00420 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Gabpb1Q00420 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
Gabpb1Q00420 Gm43613-201ENSMUST00000199409 1613 ntBASIC4.24□□□□□ -1.73
Gabpb1Q00420 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Gabpb1Q00420 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Gabpb1Q00420 Gm42717-201ENSMUST00000197309 3463 ntBASIC4.24□□□□□ -1.73
Gabpb1Q00420 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC4.24□□□□□ -1.73
Gabpb1Q00420 Gm43594-201ENSMUST00000201153 3442 ntBASIC4.24□□□□□ -1.73
Gabpb1Q00420 Gm22019-201ENSMUST00000104359 96 ntBASIC4.24□□□□□ -1.73
Gabpb1Q00420 Gm25726-201ENSMUST00000104529 129 ntBASIC4.24□□□□□ -1.73
Gabpb1Q00420 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Gabpb1Q00420 Gm15403-201ENSMUST00000119343 1227 ntBASIC4.24□□□□□ -1.73
Gabpb1Q00420 Klra14-ps-201ENSMUST00000119532 802 ntBASIC4.24□□□□□ -1.73
Gabpb1Q00420 Gm14927-201ENSMUST00000120283 454 ntBASIC4.24□□□□□ -1.73
Gabpb1Q00420 Llph-ps2-201ENSMUST00000122000 393 ntBASIC4.24□□□□□ -1.73
Gabpb1Q00420 Gm11344-201ENSMUST00000122011 335 ntBASIC4.24□□□□□ -1.73
Gabpb1Q00420 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC4.24□□□□□ -1.73
Gabpb1Q00420 Gm23792-201ENSMUST00000122557 93 ntBASIC4.24□□□□□ -1.73
Gabpb1Q00420 n-R5s45-201ENSMUST00000122592 110 ntBASIC4.24□□□□□ -1.73
Gabpb1Q00420 Gm22378-201ENSMUST00000157481 111 ntBASIC4.24□□□□□ -1.73
Gabpb1Q00420 Gm17153-201ENSMUST00000171314 490 ntBASIC4.24□□□□□ -1.73
Gabpb1Q00420 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Gabpb1Q00420 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC4.24□□□□□ -1.73
Gabpb1Q00420 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Gabpb1Q00420 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Gabpb1Q00420 Gm37002-201ENSMUST00000194560 373 ntBASIC4.24□□□□□ -1.73
Gabpb1Q00420 Gm38018-201ENSMUST00000195651 540 ntBASIC4.24□□□□□ -1.73
Gabpb1Q00420 4930425K10Rik-201ENSMUST00000201190 745 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Gabpb1Q00420 Gm44032-201ENSMUST00000204841 166 ntBASIC4.24□□□□□ -1.73
Gabpb1Q00420 Gm45367-201ENSMUST00000210171 347 ntBASIC4.24□□□□□ -1.73
Gabpb1Q00420 AC069561.4-201ENSMUST00000215291 572 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
Gabpb1Q00420 AC132112.1-201ENSMUST00000226354 505 ntBASIC4.24□□□□□ -1.73
Gabpb1Q00420 AC154738.2-201ENSMUST00000227403 1110 ntBASIC4.24□□□□□ -1.73
Gabpb1Q00420 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Gabpb1Q00420 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Gabpb1Q00420 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Gabpb1Q00420 Gm10115-201ENSMUST00000076071 1228 ntBASIC4.24□□□□□ -1.73
Gabpb1Q00420 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Gabpb1Q00420 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Gabpb1Q00420 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Gabpb1Q00420 AC134596.1-201ENSMUST00000222016 1922 ntBASIC4.24□□□□□ -1.73
Gabpb1Q00420 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Gabpb1Q00420 Gm8734-201ENSMUST00000211669 1312 ntBASIC4.23□□□□□ -1.73
Gabpb1Q00420 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC4.23□□□□□ -1.73
Gabpb1Q00420 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Gabpb1Q00420 Gm43200-201ENSMUST00000200385 2161 ntBASIC4.23□□□□□ -1.73
Gabpb1Q00420 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Gabpb1Q00420 Gm43990-201ENSMUST00000203790 1691 ntBASIC4.23□□□□□ -1.73
Gabpb1Q00420 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Gabpb1Q00420 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Gabpb1Q00420 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Gabpb1Q00420 Gm23424-201ENSMUST00000103889 110 ntBASIC4.23□□□□□ -1.73
Gabpb1Q00420 Gm23322-201ENSMUST00000104464 167 ntBASIC4.23□□□□□ -1.73
Gabpb1Q00420 Gm24067-201ENSMUST00000104514 85 ntBASIC4.23□□□□□ -1.73
Gabpb1Q00420 Gm15785-201ENSMUST00000119145 694 ntBASIC4.23□□□□□ -1.73
Gabpb1Q00420 Gm15923-201ENSMUST00000119300 1169 ntBASIC4.23□□□□□ -1.73
Gabpb1Q00420 Defa-ps12-201ENSMUST00000122353 193 ntBASIC4.23□□□□□ -1.73
Gabpb1Q00420 Gm22453-201ENSMUST00000122801 318 ntBASIC4.23□□□□□ -1.73
Gabpb1Q00420 Gm3030-201ENSMUST00000163410 516 ntBASIC4.23□□□□□ -1.73
Gabpb1Q00420 Gm3339-201ENSMUST00000163462 475 ntBASIC4.23□□□□□ -1.73
Gabpb1Q00420 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Gabpb1Q00420 Gm8265-201ENSMUST00000170469 475 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Gabpb1Q00420 Gm17075-201ENSMUST00000171924 670 ntBASIC4.23□□□□□ -1.73
Gabpb1Q00420 Gm18595-201ENSMUST00000175736 1068 ntBASIC4.23□□□□□ -1.73
Gabpb1Q00420 Gm23215-201ENSMUST00000178153 121 ntBASIC4.23□□□□□ -1.73
Gabpb1Q00420 Gm37088-201ENSMUST00000193887 406 ntBASIC4.23□□□□□ -1.73
Gabpb1Q00420 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC4.23□□□□□ -1.73
Gabpb1Q00420 Gm38080-201ENSMUST00000194035 268 ntBASIC4.23□□□□□ -1.73
Gabpb1Q00420 Gm38268-201ENSMUST00000195813 193 ntBASIC4.23□□□□□ -1.73
Gabpb1Q00420 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC4.23□□□□□ -1.73
Gabpb1Q00420 Gm35702-201ENSMUST00000198653 511 ntBASIC4.23□□□□□ -1.73
Gabpb1Q00420 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC4.23□□□□□ -1.73
Gabpb1Q00420 Gm44773-201ENSMUST00000207374 557 ntBASIC4.23□□□□□ -1.73
Gabpb1Q00420 Gm6303-201ENSMUST00000210123 471 ntBASIC4.23□□□□□ -1.73
Gabpb1Q00420 Gm5373-201ENSMUST00000212113 1050 ntBASIC4.23□□□□□ -1.73
Gabpb1Q00420 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC4.23□□□□□ -1.73
Gabpb1Q00420 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC4.23□□□□□ -1.73
Gabpb1Q00420 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Gabpb1Q00420 AC158392.1-201ENSMUST00000223720 1069 ntBASIC4.23□□□□□ -1.73
Gabpb1Q00420 AC154467.1-201ENSMUST00000227527 449 ntBASIC4.23□□□□□ -1.73
Gabpb1Q00420 Vmn1r28-203ENSMUST00000228678 909 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Gabpb1Q00420 Olfr186-201ENSMUST00000062380 1005 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Gabpb1Q00420 Olfr784-201ENSMUST00000082342 960 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Gabpb1Q00420 Gm26203-201ENSMUST00000082911 114 ntBASIC4.23□□□□□ -1.73
Gabpb1Q00420 Gm23099-201ENSMUST00000083454 139 ntBASIC4.23□□□□□ -1.73
Gabpb1Q00420 n-R5s182-201ENSMUST00000083889 107 ntBASIC4.23□□□□□ -1.73
Gabpb1Q00420 Olfr338-202ENSMUST00000091006 921 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Gabpb1Q00420 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms