Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Gm38269-201ENSMUST00000194549 3298 ntBASIC4.08□□□□□ -1.76
Scn1bP97952 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Scn1bP97952 Gm15090-201ENSMUST00000118787 1196 ntBASIC4.08□□□□□ -1.76
Scn1bP97952 Gm13887-201ENSMUST00000119009 344 ntBASIC4.08□□□□□ -1.76
Scn1bP97952 Gm11262-201ENSMUST00000119326 833 ntBASIC4.08□□□□□ -1.76
Scn1bP97952 Gm12383-201ENSMUST00000120628 760 ntBASIC4.08□□□□□ -1.76
Scn1bP97952 Gm11804-201ENSMUST00000121663 468 ntBASIC4.08□□□□□ -1.76
Scn1bP97952 Gm15116-201ENSMUST00000122248 663 ntBASIC4.08□□□□□ -1.76
Scn1bP97952 Gm15089-201ENSMUST00000122332 1196 ntBASIC4.08□□□□□ -1.76
Scn1bP97952 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC4.08□□□□□ -1.76
Scn1bP97952 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Scn1bP97952 Gm13194-201ENSMUST00000142299 311 ntBASIC4.08□□□□□ -1.76
Scn1bP97952 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC4.08□□□□□ -1.76
Scn1bP97952 Gm22819-201ENSMUST00000157445 303 ntBASIC4.08□□□□□ -1.76
Scn1bP97952 Gm24289-201ENSMUST00000157629 135 ntBASIC4.08□□□□□ -1.76
Scn1bP97952 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Scn1bP97952 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
Scn1bP97952 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC4.08□□□□□ -1.76
Scn1bP97952 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Scn1bP97952 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC4.08□□□□□ -1.76
Scn1bP97952 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC4.08□□□□□ -1.76
Scn1bP97952 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC4.08□□□□□ -1.76
Scn1bP97952 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Scn1bP97952 Gm6546-201ENSMUST00000192096 766 ntBASIC4.08□□□□□ -1.76
Scn1bP97952 Gm43009-201ENSMUST00000199979 3566 ntBASIC4.08□□□□□ -1.76
Scn1bP97952 Gm44332-201ENSMUST00000203712 433 ntBASIC4.08□□□□□ -1.76
Scn1bP97952 Gm45317-201ENSMUST00000210385 223 ntBASIC4.08□□□□□ -1.76
Scn1bP97952 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Scn1bP97952 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Scn1bP97952 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Scn1bP97952 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC4.08□□□□□ -1.76
Scn1bP97952 Gm7198-201ENSMUST00000219635 1074 ntBASIC4.08□□□□□ -1.76
Scn1bP97952 AC125531.1-201ENSMUST00000219849 221 ntBASIC4.08□□□□□ -1.76
Scn1bP97952 AC156952.1-201ENSMUST00000220361 793 ntBASIC4.08□□□□□ -1.76
Scn1bP97952 Gm6056-201ENSMUST00000221253 488 ntBASIC4.08□□□□□ -1.76
Scn1bP97952 Gm9512-201ENSMUST00000223112 497 ntBASIC4.08□□□□□ -1.76
Scn1bP97952 AC160958.1-201ENSMUST00000224833 368 ntBASIC4.08□□□□□ -1.76
Scn1bP97952 AC116395.1-201ENSMUST00000225480 1143 ntBASIC4.08□□□□□ -1.76
Scn1bP97952 AC154681.1-201ENSMUST00000225876 1735 ntBASIC4.08□□□□□ -1.76
Scn1bP97952 AC154640.2-201ENSMUST00000226324 472 ntBASIC4.08□□□□□ -1.76
Scn1bP97952 4930510E17Rik-201ENSMUST00000034550 1639 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Scn1bP97952 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Scn1bP97952 Olfr1465-201ENSMUST00000080142 924 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Scn1bP97952 Gm24525-201ENSMUST00000082917 151 ntBASIC4.08□□□□□ -1.76
Scn1bP97952 Gm23875-201ENSMUST00000083711 318 ntBASIC4.08□□□□□ -1.76
Scn1bP97952 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
Scn1bP97952 Olfr679-201ENSMUST00000098158 952 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Scn1bP97952 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Scn1bP97952 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Scn1bP97952 Gm45137-201ENSMUST00000208652 4415 ntBASIC4.08□□□□□ -1.76
Scn1bP97952 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
Scn1bP97952 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Scn1bP97952 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Scn1bP97952 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Scn1bP97952 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Scn1bP97952 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
Scn1bP97952 AC113059.3-201ENSMUST00000217423 2777 ntBASIC4.07□□□□□ -1.76
Scn1bP97952 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC4.07□□□□□ -1.76
Scn1bP97952 Olfr131-202ENSMUST00000172933 1358 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
Scn1bP97952 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Scn1bP97952 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC4.07□□□□□ -1.76
Scn1bP97952 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC4.07□□□□□ -1.76
Scn1bP97952 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Scn1bP97952 Olfr997-ps1-201ENSMUST00000117353 939 ntBASIC4.07□□□□□ -1.76
Scn1bP97952 Gm7189-201ENSMUST00000119811 429 ntBASIC4.07□□□□□ -1.76
Scn1bP97952 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Scn1bP97952 Gm14979-201ENSMUST00000121561 1035 ntBASIC4.07□□□□□ -1.76
Scn1bP97952 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC4.07□□□□□ -1.76
Scn1bP97952 Gm11233-201ENSMUST00000122357 634 ntBASIC4.07□□□□□ -1.76
Scn1bP97952 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Scn1bP97952 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Scn1bP97952 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
Scn1bP97952 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC4.07□□□□□ -1.76
Scn1bP97952 Gm27033-201ENSMUST00000183226 544 ntBASIC4.07□□□□□ -1.76
Scn1bP97952 Gm33206-201ENSMUST00000193544 454 ntTSL 2 BASIC4.07□□□□□ -1.76
Scn1bP97952 Gm37601-201ENSMUST00000194922 394 ntBASIC4.07□□□□□ -1.76
Scn1bP97952 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC4.07□□□□□ -1.76
Scn1bP97952 Igkv3-8-201ENSMUST00000197635 339 ntBASIC4.07□□□□□ -1.76
Scn1bP97952 Csn2-208ENSMUST00000198057 827 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
Scn1bP97952 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Scn1bP97952 Gm43945-201ENSMUST00000203595 754 ntBASIC4.07□□□□□ -1.76
Scn1bP97952 Gm8209-201ENSMUST00000206386 553 ntBASIC4.07□□□□□ -1.76
Scn1bP97952 Gm44816-201ENSMUST00000206666 477 ntBASIC4.07□□□□□ -1.76
Scn1bP97952 Gm45660-201ENSMUST00000210267 151 ntBASIC4.07□□□□□ -1.76
Scn1bP97952 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Scn1bP97952 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC4.07□□□□□ -1.76
Scn1bP97952 AC158523.1-201ENSMUST00000221398 328 ntBASIC4.07□□□□□ -1.76
Scn1bP97952 Gm36501-201ENSMUST00000221857 745 ntBASIC4.07□□□□□ -1.76
Scn1bP97952 AC154623.1-201ENSMUST00000224348 805 ntBASIC4.07□□□□□ -1.76
Scn1bP97952 AL606513.1-201ENSMUST00000225369 579 ntBASIC4.07□□□□□ -1.76
Scn1bP97952 AC164437.2-201ENSMUST00000228915 797 ntBASIC4.07□□□□□ -1.76
Scn1bP97952 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Scn1bP97952 Olfr1495-201ENSMUST00000061669 1089 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Scn1bP97952 Csn1s2a-201ENSMUST00000076379 920 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
Scn1bP97952 Gm22741-201ENSMUST00000083438 165 ntBASIC4.07□□□□□ -1.76
Scn1bP97952 Mir188-201ENSMUST00000083464 68 ntBASIC4.07□□□□□ -1.76
Scn1bP97952 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
Scn1bP97952 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
Scn1bP97952 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
Scn1bP97952 Dach2-202ENSMUST00000113378 2089 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 105.1 ms