Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm23424-201ENSMUST00000103889 110 ntBASIC3.39□□□□□ -1.87
Nkx3-1P97436 Gm15018-201ENSMUST00000117090 633 ntBASIC3.39□□□□□ -1.87
Nkx3-1P97436 Gm11372-201ENSMUST00000117348 570 ntBASIC3.39□□□□□ -1.87
Nkx3-1P97436 Gm11566-201ENSMUST00000118550 203 ntBASIC3.39□□□□□ -1.87
Nkx3-1P97436 Gm13118-201ENSMUST00000120402 549 ntBASIC3.39□□□□□ -1.87
Nkx3-1P97436 Gm12900-201ENSMUST00000120919 573 ntBASIC3.39□□□□□ -1.87
Nkx3-1P97436 Gm11281-201ENSMUST00000141391 576 ntBASIC3.39□□□□□ -1.87
Nkx3-1P97436 Mir1946a-201ENSMUST00000158360 134 ntBASIC3.39□□□□□ -1.87
Nkx3-1P97436 Mir7676-1-201ENSMUST00000183491 62 ntBASIC3.39□□□□□ -1.87
Nkx3-1P97436 Mir7676-2-201ENSMUST00000183523 62 ntBASIC3.39□□□□□ -1.87
Nkx3-1P97436 Mir6408-201ENSMUST00000183643 91 ntBASIC3.39□□□□□ -1.87
Nkx3-1P97436 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC3.39□□□□□ -1.87
Nkx3-1P97436 Gm29563-201ENSMUST00000187249 496 ntBASIC3.39□□□□□ -1.87
Nkx3-1P97436 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC3.39□□□□□ -1.87
Nkx3-1P97436 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC3.39□□□□□ -1.87
Nkx3-1P97436 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC3.39□□□□□ -1.87
Nkx3-1P97436 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Nkx3-1P97436 Gm17781-201ENSMUST00000195232 649 ntBASIC3.39□□□□□ -1.87
Nkx3-1P97436 Gm29704-201ENSMUST00000196011 253 ntBASIC3.39□□□□□ -1.87
Nkx3-1P97436 Gm42610-201ENSMUST00000196557 650 ntTSL 3 BASIC3.39□□□□□ -1.87
Nkx3-1P97436 Gm7041-201ENSMUST00000201227 524 ntBASIC3.39□□□□□ -1.87
Nkx3-1P97436 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC3.39□□□□□ -1.87
Nkx3-1P97436 Olfr1492-ps1-201ENSMUST00000207071 865 ntBASIC3.39□□□□□ -1.87
Nkx3-1P97436 Gm6303-201ENSMUST00000210123 471 ntBASIC3.39□□□□□ -1.87
Nkx3-1P97436 AC160134.1-201ENSMUST00000213450 551 ntBASIC3.39□□□□□ -1.87
Nkx3-1P97436 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Nkx3-1P97436 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC3.39□□□□□ -1.87
Nkx3-1P97436 Gm3829-201ENSMUST00000222362 619 ntBASIC3.39□□□□□ -1.87
Nkx3-1P97436 AC131997.2-201ENSMUST00000227452 362 ntBASIC3.39□□□□□ -1.87
Nkx3-1P97436 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Nkx3-1P97436 Gm22868-201ENSMUST00000083955 164 ntBASIC3.39□□□□□ -1.87
Nkx3-1P97436 Olfr594-201ENSMUST00000098205 1087 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Nkx3-1P97436 AC152981.1-201ENSMUST00000218320 2480 ntBASIC3.39□□□□□ -1.87
Nkx3-1P97436 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Nkx3-1P97436 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Nkx3-1P97436 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Nkx3-1P97436 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Nkx3-1P97436 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC3.39□□□□□ -1.87
Nkx3-1P97436 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
Nkx3-1P97436 AC167360.1-201ENSMUST00000222596 2494 ntBASIC3.38□□□□□ -1.87
Nkx3-1P97436 Gm38069-201ENSMUST00000195360 2144 ntBASIC3.38□□□□□ -1.87
Nkx3-1P97436 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Nkx3-1P97436 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
Nkx3-1P97436 Gm25764-201ENSMUST00000104092 134 ntBASIC3.38□□□□□ -1.87
Nkx3-1P97436 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Nkx3-1P97436 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Nkx3-1P97436 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Nkx3-1P97436 Gm22531-201ENSMUST00000158819 140 ntBASIC3.38□□□□□ -1.87
Nkx3-1P97436 Gm2862-201ENSMUST00000161524 328 ntBASIC3.38□□□□□ -1.87
Nkx3-1P97436 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Nkx3-1P97436 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Nkx3-1P97436 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Nkx3-1P97436 Gm29588-201ENSMUST00000185738 298 ntBASIC3.38□□□□□ -1.87
Nkx3-1P97436 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC3.38□□□□□ -1.87
Nkx3-1P97436 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC3.38□□□□□ -1.87
Nkx3-1P97436 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Nkx3-1P97436 Gm44294-201ENSMUST00000205090 728 ntBASIC3.38□□□□□ -1.87
Nkx3-1P97436 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC3.38□□□□□ -1.87
Nkx3-1P97436 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC3.38□□□□□ -1.87
Nkx3-1P97436 Gm7587-201ENSMUST00000207618 1021 ntBASIC3.38□□□□□ -1.87
Nkx3-1P97436 Gm8231-201ENSMUST00000221617 783 ntBASIC3.38□□□□□ -1.87
Nkx3-1P97436 Olfr1484-201ENSMUST00000074180 948 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Nkx3-1P97436 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Nkx3-1P97436 Gm23518-201ENSMUST00000082835 153 ntBASIC3.38□□□□□ -1.87
Nkx3-1P97436 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Nkx3-1P97436 Gm35755-201ENSMUST00000222392 2077 ntBASIC3.38□□□□□ -1.87
Nkx3-1P97436 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Nkx3-1P97436 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Nkx3-1P97436 Gm5347-201ENSMUST00000210542 2327 ntBASIC3.38□□□□□ -1.87
Nkx3-1P97436 Gm12586-201ENSMUST00000117328 1316 ntBASIC3.38□□□□□ -1.87
Nkx3-1P97436 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Nkx3-1P97436 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Nkx3-1P97436 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Nkx3-1P97436 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Nkx3-1P97436 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Nkx3-1P97436 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Nkx3-1P97436 Gm42768-201ENSMUST00000197734 2897 ntBASIC3.37□□□□□ -1.87
Nkx3-1P97436 Gm36927-201ENSMUST00000192504 1841 ntBASIC3.37□□□□□ -1.87
Nkx3-1P97436 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Nkx3-1P97436 Vmn1r36-203ENSMUST00000226728 1458 ntBASIC3.37□□□□□ -1.87
Nkx3-1P97436 Gm37718-201ENSMUST00000191655 2631 ntBASIC3.37□□□□□ -1.87
Nkx3-1P97436 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Nkx3-1P97436 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Nkx3-1P97436 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Nkx3-1P97436 Gm10241-201ENSMUST00000117664 286 ntBASIC3.37□□□□□ -1.87
Nkx3-1P97436 Gm11719-201ENSMUST00000119399 351 ntBASIC3.37□□□□□ -1.87
Nkx3-1P97436 Gm15926-201ENSMUST00000120492 550 ntBASIC3.37□□□□□ -1.87
Nkx3-1P97436 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC3.37□□□□□ -1.87
Nkx3-1P97436 Gm13440-201ENSMUST00000121665 496 ntBASIC3.37□□□□□ -1.87
Nkx3-1P97436 Klra11-ps-201ENSMUST00000122033 810 ntBASIC3.37□□□□□ -1.87
Nkx3-1P97436 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC3.37□□□□□ -1.87
Nkx3-1P97436 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Nkx3-1P97436 Gm22923-201ENSMUST00000174952 110 ntBASIC3.37□□□□□ -1.87
Nkx3-1P97436 Gm27392-201ENSMUST00000185041 101 ntBASIC3.37□□□□□ -1.87
Nkx3-1P97436 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Nkx3-1P97436 Gm7967-203ENSMUST00000191409 1049 ntTSL 5 BASIC3.37□□□□□ -1.87
Nkx3-1P97436 Gm38098-201ENSMUST00000194115 241 ntBASIC3.37□□□□□ -1.87
Nkx3-1P97436 Gm19243-201ENSMUST00000198592 269 ntBASIC3.37□□□□□ -1.87
Nkx3-1P97436 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC3.37□□□□□ -1.87
Nkx3-1P97436 Gm44003-201ENSMUST00000203024 490 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms