Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm12760-201ENSMUST00000117861 482 ntBASIC2.54□□□□□ -2
PrkdcP97313 Gm12311-201ENSMUST00000118803 374 ntBASIC2.54□□□□□ -2
PrkdcP97313 Gm7308-201ENSMUST00000121087 447 ntBASIC2.54□□□□□ -2
PrkdcP97313 Gm12617-201ENSMUST00000121268 381 ntBASIC2.54□□□□□ -2
PrkdcP97313 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC2.54□□□□□ -2
PrkdcP97313 Gm24537-201ENSMUST00000157950 102 ntBASIC2.54□□□□□ -2
PrkdcP97313 Gm8747-201ENSMUST00000195392 751 ntBASIC2.54□□□□□ -2
PrkdcP97313 Gm44773-201ENSMUST00000207374 557 ntBASIC2.54□□□□□ -2
PrkdcP97313 Gm26861-206ENSMUST00000222633 1039 ntTSL 5 BASIC2.54□□□□□ -2
PrkdcP97313 AC117797.2-201ENSMUST00000224419 531 ntBASIC2.54□□□□□ -2
PrkdcP97313 Gm10916-201ENSMUST00000080330 483 ntBASIC2.54□□□□□ -2
PrkdcP97313 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
PrkdcP97313 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
PrkdcP97313 Gm43844-201ENSMUST00000202926 5605 ntBASIC2.54□□□□□ -2
PrkdcP97313 Vmn1r17-203ENSMUST00000228156 2090 ntAPPRIS ALT2 BASIC2.54□□□□□ -2
PrkdcP97313 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC2.54□□□□□ -2
PrkdcP97313 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC2.54□□□□□ -2
PrkdcP97313 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
PrkdcP97313 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC2.54□□□□□ -2
PrkdcP97313 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC2.54□□□□□ -2
PrkdcP97313 Gm4468-201ENSMUST00000170206 294 ntBASIC2.54□□□□□ -2
PrkdcP97313 Gm29062-201ENSMUST00000186032 694 ntBASIC2.54□□□□□ -2
PrkdcP97313 Gm28255-201ENSMUST00000187101 694 ntBASIC2.54□□□□□ -2
PrkdcP97313 Gm29545-201ENSMUST00000188878 694 ntBASIC2.54□□□□□ -2
PrkdcP97313 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC2.54□□□□□ -2
PrkdcP97313 AC102815.1-201ENSMUST00000226662 1061 ntBASIC2.54□□□□□ -2
PrkdcP97313 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
PrkdcP97313 Gm43831-201ENSMUST00000200461 2598 ntBASIC2.54□□□□□ -2
PrkdcP97313 Gm5362-201ENSMUST00000211968 3085 ntBASIC2.54□□□□□ -2
PrkdcP97313 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC2.54□□□□□ -2
PrkdcP97313 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
PrkdcP97313 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
PrkdcP97313 Cep192-201ENSMUST00000025425 8093 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
PrkdcP97313 Fus-202ENSMUST00000079045 2623 ntBASIC2.54□□□□□ -2
PrkdcP97313 Gm12010-201ENSMUST00000122400 2017 ntBASIC2.54□□□□□ -2
PrkdcP97313 Gm23766-201ENSMUST00000103894 80 ntBASIC2.54□□□□□ -2
PrkdcP97313 Gm14890-201ENSMUST00000117660 676 ntBASIC2.54□□□□□ -2
PrkdcP97313 Amy2a1-201ENSMUST00000132353 890 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
PrkdcP97313 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC2.54□□□□□ -2
PrkdcP97313 Gm36525-201ENSMUST00000222590 638 ntTSL 5 BASIC2.54□□□□□ -2
PrkdcP97313 Olfr906-201ENSMUST00000045493 936 ntAPPRIS P1 BASIC2.54□□□□□ -2
PrkdcP97313 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
PrkdcP97313 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC2.54□□□□□ -2
PrkdcP97313 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
PrkdcP97313 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
PrkdcP97313 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC2.54□□□□□ -2
PrkdcP97313 Gm37006-201ENSMUST00000195253 2674 ntBASIC2.54□□□□□ -2
PrkdcP97313 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC2.54□□□□□ -2
PrkdcP97313 Gm3665-201ENSMUST00000177214 2461 ntBASIC2.53□□□□□ -2
PrkdcP97313 Cps1-201ENSMUST00000027144 5555 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
PrkdcP97313 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
PrkdcP97313 Gm14926-201ENSMUST00000120650 508 ntBASIC2.53□□□□□ -2
PrkdcP97313 Gm29588-201ENSMUST00000185738 298 ntBASIC2.53□□□□□ -2
PrkdcP97313 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC2.53□□□□□ -2
PrkdcP97313 Gm28830-201ENSMUST00000188192 213 ntBASIC2.53□□□□□ -2
PrkdcP97313 Gm44526-201ENSMUST00000204664 121 ntBASIC2.53□□□□□ -2
PrkdcP97313 AC153971.2-201ENSMUST00000214553 777 ntBASIC2.53□□□□□ -2
PrkdcP97313 AC129541.1-201ENSMUST00000226940 523 ntBASIC2.53□□□□□ -2
PrkdcP97313 Olfr682-ps1-201ENSMUST00000071242 934 ntBASIC2.53□□□□□ -2
PrkdcP97313 Olfr206-201ENSMUST00000084791 1005 ntAPPRIS P1 BASIC2.53□□□□□ -2
PrkdcP97313 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
PrkdcP97313 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC2.53□□□□□ -2
PrkdcP97313 Gm44822-201ENSMUST00000208559 6389 ntBASIC2.53□□□□□ -2
PrkdcP97313 Gm6300-201ENSMUST00000192393 1498 ntBASIC2.53□□□□□ -2
PrkdcP97313 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
PrkdcP97313 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
PrkdcP97313 P2ry12-203ENSMUST00000196583 2344 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
PrkdcP97313 Gm13581-201ENSMUST00000120675 278 ntBASIC2.53□□□□□ -2
PrkdcP97313 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC2.53□□□□□ -2
PrkdcP97313 Gm44261-201ENSMUST00000203337 209 ntBASIC2.53□□□□□ -2
PrkdcP97313 AC158392.2-201ENSMUST00000225402 969 ntBASIC2.53□□□□□ -2
PrkdcP97313 Olfr804-201ENSMUST00000077312 945 ntAPPRIS P1 BASIC2.53□□□□□ -2
PrkdcP97313 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC2.53□□□□□ -2
PrkdcP97313 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
PrkdcP97313 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC2.53□□□□□ -2
PrkdcP97313 AC132237.1-201ENSMUST00000220950 4475 ntBASIC2.53□□□□□ -2
PrkdcP97313 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC2.53□□□□□ -2
PrkdcP97313 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
PrkdcP97313 Gm8569-201ENSMUST00000117630 647 ntBASIC2.53□□□□□ -2
PrkdcP97313 Gm5762-201ENSMUST00000119204 258 ntBASIC2.53□□□□□ -2
PrkdcP97313 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC2.53□□□□□ -2
PrkdcP97313 Gm4222-201ENSMUST00000165784 470 ntBASIC2.53□□□□□ -2
PrkdcP97313 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC2.53□□□□□ -2
PrkdcP97313 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC2.53□□□□□ -2
PrkdcP97313 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC2.53□□□□□ -2
PrkdcP97313 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC2.53□□□□□ -2
PrkdcP97313 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC2.53□□□□□ -2
PrkdcP97313 Gm29365-201ENSMUST00000189461 699 ntBASIC2.53□□□□□ -2
PrkdcP97313 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC2.53□□□□□ -2
PrkdcP97313 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC2.53□□□□□ -2
PrkdcP97313 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
PrkdcP97313 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
PrkdcP97313 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
PrkdcP97313 Rc3h1-202ENSMUST00000161609 11006 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
PrkdcP97313 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2.01
PrkdcP97313 Gm15166-201ENSMUST00000120790 385 ntBASIC2.53□□□□□ -2.01
PrkdcP97313 Gm24681-201ENSMUST00000158760 107 ntBASIC2.53□□□□□ -2.01
PrkdcP97313 Gm25447-201ENSMUST00000158997 128 ntBASIC2.53□□□□□ -2.01
PrkdcP97313 Mir7068-201ENSMUST00000183439 74 ntBASIC2.53□□□□□ -2.01
PrkdcP97313 Gm37490-201ENSMUST00000195566 724 ntBASIC2.53□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms