Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm11633-201ENSMUST00000118176 444 ntBASIC5.74□□□□□ -1.49
Sox1P53783 Gm14815-201ENSMUST00000120060 488 ntBASIC5.74□□□□□ -1.49
Sox1P53783 Gm14821-201ENSMUST00000121975 435 ntBASIC5.74□□□□□ -1.49
Sox1P53783 Gm25293-201ENSMUST00000122792 285 ntBASIC5.74□□□□□ -1.49
Sox1P53783 Gm22235-201ENSMUST00000157085 110 ntBASIC5.74□□□□□ -1.49
Sox1P53783 Gm24188-201ENSMUST00000157980 108 ntBASIC5.74□□□□□ -1.49
Sox1P53783 Gm15900-201ENSMUST00000161584 342 ntBASIC5.74□□□□□ -1.49
Sox1P53783 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Sox1P53783 Gm8532-201ENSMUST00000179174 461 ntBASIC5.74□□□□□ -1.49
Sox1P53783 Gm29124-201ENSMUST00000186576 452 ntBASIC5.74□□□□□ -1.49
Sox1P53783 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Sox1P53783 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC5.74□□□□□ -1.49
Sox1P53783 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC5.74□□□□□ -1.49
Sox1P53783 Gm43083-201ENSMUST00000199594 476 ntBASIC5.74□□□□□ -1.49
Sox1P53783 Gm5322-201ENSMUST00000206142 699 ntBASIC5.74□□□□□ -1.49
Sox1P53783 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Sox1P53783 AC091783.2-201ENSMUST00000224626 740 ntBASIC5.74□□□□□ -1.49
Sox1P53783 CT010506.2-201ENSMUST00000225618 183 ntBASIC5.74□□□□□ -1.49
Sox1P53783 AC123061.2-201ENSMUST00000226234 802 ntBASIC5.74□□□□□ -1.49
Sox1P53783 CT025157.1-201ENSMUST00000226241 292 ntBASIC5.74□□□□□ -1.49
Sox1P53783 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Sox1P53783 Olfr960-201ENSMUST00000077060 1067 ntAPPRIS P2 BASIC5.74□□□□□ -1.49
Sox1P53783 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC5.74□□□□□ -1.49
Sox1P53783 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC5.74□□□□□ -1.49
Sox1P53783 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC5.74□□□□□ -1.49
Sox1P53783 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC5.74□□□□□ -1.49
Sox1P53783 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC5.74□□□□□ -1.49
Sox1P53783 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC5.74□□□□□ -1.49
Sox1P53783 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC5.74□□□□□ -1.49
Sox1P53783 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC5.74□□□□□ -1.49
Sox1P53783 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC5.74□□□□□ -1.49
Sox1P53783 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC5.74□□□□□ -1.49
Sox1P53783 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Sox1P53783 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Sox1P53783 Gm20287-201ENSMUST00000172848 2367 ntBASIC5.74□□□□□ -1.49
Sox1P53783 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Sox1P53783 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
Sox1P53783 Gm3616-201ENSMUST00000174430 2514 ntBASIC5.74□□□□□ -1.49
Sox1P53783 Gm3683-201ENSMUST00000175701 2513 ntBASIC5.74□□□□□ -1.49
Sox1P53783 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Sox1P53783 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Sox1P53783 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
Sox1P53783 AC164297.2-201ENSMUST00000224388 1508 ntBASIC5.74□□□□□ -1.49
Sox1P53783 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC5.73□□□□□ -1.49
Sox1P53783 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Sox1P53783 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
Sox1P53783 Gm29084-201ENSMUST00000185587 1452 ntBASIC5.73□□□□□ -1.49
Sox1P53783 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC5.73□□□□□ -1.49
Sox1P53783 Gm11219-201ENSMUST00000118565 358 ntBASIC5.73□□□□□ -1.49
Sox1P53783 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Sox1P53783 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC5.73□□□□□ -1.49
Sox1P53783 Mup-ps18-201ENSMUST00000120145 531 ntBASIC5.73□□□□□ -1.49
Sox1P53783 Gm25365-201ENSMUST00000158852 121 ntBASIC5.73□□□□□ -1.49
Sox1P53783 Ear-ps12-201ENSMUST00000161720 451 ntBASIC5.73□□□□□ -1.49
Sox1P53783 Gm16114-201ENSMUST00000161930 300 ntBASIC5.73□□□□□ -1.49
Sox1P53783 Gm17081-201ENSMUST00000167363 478 ntBASIC5.73□□□□□ -1.49
Sox1P53783 Ear-ps3-201ENSMUST00000168308 445 ntBASIC5.73□□□□□ -1.49
Sox1P53783 Gm20656-201ENSMUST00000176925 518 ntBASIC5.73□□□□□ -1.49
Sox1P53783 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Sox1P53783 Gm22951-201ENSMUST00000179471 107 ntBASIC5.73□□□□□ -1.49
Sox1P53783 Gm27161-201ENSMUST00000183960 562 ntBASIC5.73□□□□□ -1.49
Sox1P53783 Gm28629-201ENSMUST00000187309 263 ntBASIC5.73□□□□□ -1.49
Sox1P53783 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC5.73□□□□□ -1.49
Sox1P53783 Gm28492-201ENSMUST00000190899 1019 ntBASIC5.73□□□□□ -1.49
Sox1P53783 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC5.73□□□□□ -1.49
Sox1P53783 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC5.73□□□□□ -1.49
Sox1P53783 Gm42758-201ENSMUST00000202146 283 ntBASIC5.73□□□□□ -1.49
Sox1P53783 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Sox1P53783 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC5.73□□□□□ -1.49
Sox1P53783 Gm44041-201ENSMUST00000203678 396 ntBASIC5.73□□□□□ -1.49
Sox1P53783 Gm45023-201ENSMUST00000207951 379 ntBASIC5.73□□□□□ -1.49
Sox1P53783 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC5.73□□□□□ -1.49
Sox1P53783 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC5.73□□□□□ -1.49
Sox1P53783 Gm45523-201ENSMUST00000210712 799 ntBASIC5.73□□□□□ -1.49
Sox1P53783 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC5.73□□□□□ -1.49
Sox1P53783 Gm46327-201ENSMUST00000218240 365 ntBASIC5.73□□□□□ -1.49
Sox1P53783 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC5.73□□□□□ -1.49
Sox1P53783 CT030182.3-201ENSMUST00000225986 582 ntBASIC5.73□□□□□ -1.49
Sox1P53783 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Sox1P53783 Olfr482-201ENSMUST00000081184 972 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Sox1P53783 Gm4017-201ENSMUST00000084813 338 ntBASIC5.73□□□□□ -1.49
Sox1P53783 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC5.73□□□□□ -1.49
Sox1P53783 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC5.73□□□□□ -1.49
Sox1P53783 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Sox1P53783 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
Sox1P53783 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
Sox1P53783 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Sox1P53783 Olfr970-202ENSMUST00000213975 1630 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Sox1P53783 AC102847.2-201ENSMUST00000227799 2906 ntBASIC5.73□□□□□ -1.49
Sox1P53783 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Sox1P53783 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Sox1P53783 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Sox1P53783 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Sox1P53783 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Sox1P53783 Gm37789-201ENSMUST00000192862 2889 ntBASIC5.73□□□□□ -1.49
Sox1P53783 AC124586.1-201ENSMUST00000221673 2795 ntBASIC5.72□□□□□ -1.49
Sox1P53783 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Sox1P53783 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC5.72□□□□□ -1.49
Sox1P53783 AC152944.1-201ENSMUST00000220160 3101 ntBASIC5.72□□□□□ -1.49
Sox1P53783 Mpp5-201ENSMUST00000082024 5470 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 97 ms