Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Rfx1P48377 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Rfx1P48377 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC6.39□□□□□ -1.39
Rfx1P48377 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Rfx1P48377 Clca3a1-202ENSMUST00000059091 3524 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Rfx1P48377 AC187103.2-201ENSMUST00000223605 1617 ntBASIC6.39□□□□□ -1.39
Rfx1P48377 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Rfx1P48377 Gm10933-201ENSMUST00000221891 1861 ntBASIC6.39□□□□□ -1.39
Rfx1P48377 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Rfx1P48377 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Rfx1P48377 Gm44235-201ENSMUST00000204312 3058 ntBASIC6.38□□□□□ -1.39
Rfx1P48377 Gm23739-201ENSMUST00000102295 108 ntBASIC6.38□□□□□ -1.39
Rfx1P48377 Mir450-2-201ENSMUST00000102444 69 ntBASIC6.38□□□□□ -1.39
Rfx1P48377 Gm23311-201ENSMUST00000104152 134 ntBASIC6.38□□□□□ -1.39
Rfx1P48377 Defa-ps13-201ENSMUST00000120695 204 ntBASIC6.38□□□□□ -1.39
Rfx1P48377 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC6.38□□□□□ -1.39
Rfx1P48377 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC6.38□□□□□ -1.39
Rfx1P48377 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Rfx1P48377 Gm22716-201ENSMUST00000177596 107 ntBASIC6.38□□□□□ -1.39
Rfx1P48377 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Rfx1P48377 Gm28604-201ENSMUST00000186629 484 ntBASIC6.38□□□□□ -1.39
Rfx1P48377 Gm28566-201ENSMUST00000186714 484 ntBASIC6.38□□□□□ -1.39
Rfx1P48377 Gm28194-201ENSMUST00000187412 484 ntBASIC6.38□□□□□ -1.39
Rfx1P48377 Gm28886-202ENSMUST00000187889 484 ntBASIC6.38□□□□□ -1.39
Rfx1P48377 Gm29284-201ENSMUST00000188363 255 ntBASIC6.38□□□□□ -1.39
Rfx1P48377 Gm28554-202ENSMUST00000189175 484 ntBASIC6.38□□□□□ -1.39
Rfx1P48377 Gm29213-202ENSMUST00000189703 484 ntBASIC6.38□□□□□ -1.39
Rfx1P48377 Gm28851-202ENSMUST00000189757 484 ntBASIC6.38□□□□□ -1.39
Rfx1P48377 Gm28461-201ENSMUST00000190023 484 ntBASIC6.38□□□□□ -1.39
Rfx1P48377 Gm43975-201ENSMUST00000203023 481 ntBASIC6.38□□□□□ -1.39
Rfx1P48377 Gm44149-201ENSMUST00000204256 226 ntBASIC6.38□□□□□ -1.39
Rfx1P48377 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Rfx1P48377 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC6.38□□□□□ -1.39
Rfx1P48377 AC133650.1-201ENSMUST00000217243 578 ntBASIC6.38□□□□□ -1.39
Rfx1P48377 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Rfx1P48377 AC104832.1-201ENSMUST00000222938 550 ntBASIC6.38□□□□□ -1.39
Rfx1P48377 AC126275.2-201ENSMUST00000225224 253 ntBASIC6.38□□□□□ -1.39
Rfx1P48377 CT025689.4-201ENSMUST00000225926 601 ntBASIC6.38□□□□□ -1.39
Rfx1P48377 Gm25079-201ENSMUST00000082529 203 ntBASIC6.38□□□□□ -1.39
Rfx1P48377 n-R5s94-201ENSMUST00000082573 119 ntBASIC6.38□□□□□ -1.39
Rfx1P48377 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Rfx1P48377 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Rfx1P48377 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC6.38□□□□□ -1.39
Rfx1P48377 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Rfx1P48377 Gm29112-201ENSMUST00000188962 3487 ntBASIC6.37□□□□□ -1.39
Rfx1P48377 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Rfx1P48377 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Rfx1P48377 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Rfx1P48377 AC140299.2-201ENSMUST00000219546 1969 ntBASIC6.37□□□□□ -1.39
Rfx1P48377 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC6.37□□□□□ -1.39
Rfx1P48377 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Rfx1P48377 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Rfx1P48377 Gm4759-201ENSMUST00000183414 6622 ntBASIC6.37□□□□□ -1.39
Rfx1P48377 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Rfx1P48377 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Rfx1P48377 Gm6923-201ENSMUST00000118343 406 ntBASIC6.37□□□□□ -1.39
Rfx1P48377 Gm15034-201ENSMUST00000120043 349 ntBASIC6.37□□□□□ -1.39
Rfx1P48377 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Rfx1P48377 Crem-224ENSMUST00000147138 436 ntTSL 5 BASIC6.37□□□□□ -1.39
Rfx1P48377 Gm25117-201ENSMUST00000157194 144 ntBASIC6.37□□□□□ -1.39
Rfx1P48377 Gm23959-201ENSMUST00000157208 324 ntBASIC6.37□□□□□ -1.39
Rfx1P48377 Gm24435-201ENSMUST00000157886 110 ntBASIC6.37□□□□□ -1.39
Rfx1P48377 Gm20523-201ENSMUST00000174340 1124 ntBASIC6.37□□□□□ -1.39
Rfx1P48377 Gm27599-201ENSMUST00000183758 174 ntBASIC6.37□□□□□ -1.39
Rfx1P48377 Gm27161-201ENSMUST00000183960 562 ntBASIC6.37□□□□□ -1.39
Rfx1P48377 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Rfx1P48377 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Rfx1P48377 Gm37492-201ENSMUST00000191948 376 ntBASIC6.37□□□□□ -1.39
Rfx1P48377 Gm43116-201ENSMUST00000199789 195 ntBASIC6.37□□□□□ -1.39
Rfx1P48377 Pomp-203ENSMUST00000201376 383 ntTSL 3 BASIC6.37□□□□□ -1.39
Rfx1P48377 Chaer1-201ENSMUST00000201649 651 ntTSL 5 BASIC6.37□□□□□ -1.39
Rfx1P48377 Gm44539-201ENSMUST00000206010 238 ntBASIC6.37□□□□□ -1.39
Rfx1P48377 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC6.37□□□□□ -1.39
Rfx1P48377 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Rfx1P48377 AC162387.1-201ENSMUST00000213369 213 ntBASIC6.37□□□□□ -1.39
Rfx1P48377 AL669916.5-201ENSMUST00000214874 361 ntBASIC6.37□□□□□ -1.39
Rfx1P48377 AC119894.1-201ENSMUST00000220399 350 ntBASIC6.37□□□□□ -1.39
Rfx1P48377 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC6.37□□□□□ -1.39
Rfx1P48377 AC091783.4-201ENSMUST00000224940 611 ntBASIC6.37□□□□□ -1.39
Rfx1P48377 AC131029.2-201ENSMUST00000226696 628 ntBASIC6.37□□□□□ -1.39
Rfx1P48377 AC114572.1-201ENSMUST00000227262 300 ntBASIC6.37□□□□□ -1.39
Rfx1P48377 Mrgprb8-201ENSMUST00000056676 1123 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Rfx1P48377 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Rfx1P48377 4933411G06Rik-201ENSMUST00000075909 1022 ntBASIC6.37□□□□□ -1.39
Rfx1P48377 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC6.37□□□□□ -1.39
Rfx1P48377 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Rfx1P48377 Gm44078-201ENSMUST00000204652 2646 ntBASIC6.37□□□□□ -1.39
Rfx1P48377 Olfr473-202ENSMUST00000217618 2319 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
Rfx1P48377 Gm43282-201ENSMUST00000201848 2157 ntBASIC6.37□□□□□ -1.39
Rfx1P48377 Olfr49-202ENSMUST00000216214 5717 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Rfx1P48377 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Rfx1P48377 Cyp2c70-201ENSMUST00000051846 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Rfx1P48377 Gm4954-201ENSMUST00000135069 1601 ntBASIC6.36□□□□□ -1.39
Rfx1P48377 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Rfx1P48377 Olfr1080-201ENSMUST00000213185 1582 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
Rfx1P48377 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Rfx1P48377 Gm37738-201ENSMUST00000192396 4716 ntBASIC6.36□□□□□ -1.39
Rfx1P48377 Mir147-201ENSMUST00000102354 79 ntBASIC6.36□□□□□ -1.39
Rfx1P48377 Gm15175-201ENSMUST00000117629 132 ntBASIC6.36□□□□□ -1.39
Rfx1P48377 Gm11902-201ENSMUST00000118849 270 ntBASIC6.36□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms