Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 AC159326.1-201ENSMUST00000219989 1302 ntBASIC6.17□□□□□ -1.42
Col18a1P39061 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC6.17□□□□□ -1.42
Col18a1P39061 Gm8674-201ENSMUST00000179367 3047 ntBASIC6.16□□□□□ -1.42
Col18a1P39061 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col18a1P39061 CT025675.1-201ENSMUST00000228171 1567 ntBASIC6.16□□□□□ -1.42
Col18a1P39061 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col18a1P39061 Gm26418-201ENSMUST00000104275 137 ntBASIC6.16□□□□□ -1.42
Col18a1P39061 Gm24987-201ENSMUST00000104453 134 ntBASIC6.16□□□□□ -1.42
Col18a1P39061 Gm9432-201ENSMUST00000117810 759 ntBASIC6.16□□□□□ -1.42
Col18a1P39061 Gm11866-201ENSMUST00000120209 335 ntBASIC6.16□□□□□ -1.42
Col18a1P39061 Gm14972-201ENSMUST00000121780 364 ntBASIC6.16□□□□□ -1.42
Col18a1P39061 Gm22491-201ENSMUST00000157190 102 ntBASIC6.16□□□□□ -1.42
Col18a1P39061 Gm22794-201ENSMUST00000157228 306 ntBASIC6.16□□□□□ -1.42
Col18a1P39061 Gm43853-201ENSMUST00000197162 301 ntBASIC6.16□□□□□ -1.42
Col18a1P39061 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC6.16□□□□□ -1.42
Col18a1P39061 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC6.16□□□□□ -1.42
Col18a1P39061 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC6.16□□□□□ -1.42
Col18a1P39061 Gm5023-201ENSMUST00000217442 587 ntBASIC6.16□□□□□ -1.42
Col18a1P39061 CT571268.1-201ENSMUST00000222320 407 ntBASIC6.16□□□□□ -1.42
Col18a1P39061 Olfr971-201ENSMUST00000075467 924 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Col18a1P39061 n-R5s166-201ENSMUST00000082898 121 ntBASIC6.16□□□□□ -1.42
Col18a1P39061 Gm23242-201ENSMUST00000083055 107 ntBASIC6.16□□□□□ -1.42
Col18a1P39061 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC6.16□□□□□ -1.42
Col18a1P39061 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
Col18a1P39061 Nek7-203ENSMUST00000187407 4336 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Col18a1P39061 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col18a1P39061 Olfr560-201ENSMUST00000210453 2168 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Col18a1P39061 Gm9700-201ENSMUST00000193786 1617 ntBASIC6.16□□□□□ -1.42
Col18a1P39061 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col18a1P39061 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col18a1P39061 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col18a1P39061 Gm13219-203ENSMUST00000154223 1843 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col18a1P39061 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Col18a1P39061 Scaper-201ENSMUST00000037408 5158 ntAPPRIS P2 TSL 5 BASIC6.16□□□□□ -1.42
Col18a1P39061 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col18a1P39061 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col18a1P39061 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Col18a1P39061 Mir690-201ENSMUST00000102110 109 ntBASIC6.16□□□□□ -1.42
Col18a1P39061 Gm15159-201ENSMUST00000117062 764 ntBASIC6.16□□□□□ -1.42
Col18a1P39061 Gm15364-201ENSMUST00000119618 585 ntBASIC6.16□□□□□ -1.42
Col18a1P39061 Gm11484-201ENSMUST00000119808 338 ntBASIC6.16□□□□□ -1.42
Col18a1P39061 Gm15142-201ENSMUST00000121013 856 ntBASIC6.16□□□□□ -1.42
Col18a1P39061 Gm15534-201ENSMUST00000137642 562 ntBASIC6.16□□□□□ -1.42
Col18a1P39061 Gm16274-201ENSMUST00000139251 592 ntBASIC6.16□□□□□ -1.42
Col18a1P39061 Gm23168-201ENSMUST00000157156 143 ntBASIC6.16□□□□□ -1.42
Col18a1P39061 Gm25432-201ENSMUST00000158284 66 ntBASIC6.16□□□□□ -1.42
Col18a1P39061 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col18a1P39061 Gm36953-201ENSMUST00000195295 268 ntBASIC6.16□□□□□ -1.42
Col18a1P39061 Gm43624-201ENSMUST00000197368 180 ntBASIC6.16□□□□□ -1.42
Col18a1P39061 Gm8953-201ENSMUST00000198497 904 ntTSL 5 BASIC6.16□□□□□ -1.42
Col18a1P39061 Igkv8-31-201ENSMUST00000200040 372 ntBASIC6.16□□□□□ -1.42
Col18a1P39061 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col18a1P39061 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col18a1P39061 Olfr663-201ENSMUST00000209914 959 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Col18a1P39061 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC6.16□□□□□ -1.42
Col18a1P39061 Gm7034-201ENSMUST00000218638 645 ntBASIC6.16□□□□□ -1.42
Col18a1P39061 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col18a1P39061 Ear6-201ENSMUST00000074477 713 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col18a1P39061 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Col18a1P39061 Clasp1-210ENSMUST00000188710 10265 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Col18a1P39061 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC6.16□□□□□ -1.42
Col18a1P39061 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
Col18a1P39061 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Col18a1P39061 Cyp2c68-201ENSMUST00000099472 1724 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Col18a1P39061 Vmn2r61-201ENSMUST00000166131 2598 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Col18a1P39061 Evi5-201ENSMUST00000112642 5849 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Col18a1P39061 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Col18a1P39061 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Col18a1P39061 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Col18a1P39061 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Col18a1P39061 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC6.15□□□□□ -1.43
Col18a1P39061 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Col18a1P39061 Gm23212-201ENSMUST00000122718 60 ntBASIC6.15□□□□□ -1.43
Col18a1P39061 Gm25861-201ENSMUST00000158251 109 ntBASIC6.15□□□□□ -1.43
Col18a1P39061 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Col18a1P39061 Gm2056-201ENSMUST00000178852 435 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
Col18a1P39061 Gm18406-201ENSMUST00000185872 669 ntBASIC6.15□□□□□ -1.43
Col18a1P39061 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Col18a1P39061 Gm29793-201ENSMUST00000202874 460 ntBASIC6.15□□□□□ -1.43
Col18a1P39061 AC132384.9-201ENSMUST00000218085 277 ntBASIC6.15□□□□□ -1.43
Col18a1P39061 AC167977.1-201ENSMUST00000221384 234 ntBASIC6.15□□□□□ -1.43
Col18a1P39061 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
Col18a1P39061 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
Col18a1P39061 Snora7a-201ENSMUST00000082629 140 ntBASIC6.15□□□□□ -1.43
Col18a1P39061 Mir16-2-201ENSMUST00000083672 95 ntBASIC6.15□□□□□ -1.43
Col18a1P39061 Olfr1331-203ENSMUST00000216589 3139 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
Col18a1P39061 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC6.15□□□□□ -1.43
Col18a1P39061 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Col18a1P39061 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Col18a1P39061 Plch1-210ENSMUST00000162269 6539 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Col18a1P39061 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Col18a1P39061 Olfr15-202ENSMUST00000214238 6135 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Col18a1P39061 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Col18a1P39061 Gm37780-201ENSMUST00000194117 1873 ntBASIC6.14□□□□□ -1.43
Col18a1P39061 Il5ra-203ENSMUST00000205004 2271 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col18a1P39061 Cep170-212ENSMUST00000194727 6784 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Col18a1P39061 Unc80-201ENSMUST00000061620 13613 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Col18a1P39061 Gm11833-201ENSMUST00000118393 853 ntBASIC6.14□□□□□ -1.43
Col18a1P39061 Gm12820-201ENSMUST00000119233 342 ntBASIC6.14□□□□□ -1.43
Col18a1P39061 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC6.14□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms