Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Gm43784-201ENSMUST00000202922 2436 ntBASIC5.37□□□□□ -1.55
Usp4P35123 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
Usp4P35123 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Usp4P35123 Gm38243-201ENSMUST00000194737 1567 ntBASIC5.37□□□□□ -1.55
Usp4P35123 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Usp4P35123 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Usp4P35123 Abca13-201ENSMUST00000042740 16011 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Usp4P35123 Vmn2r-ps42-201ENSMUST00000174123 2083 ntBASIC5.36□□□□□ -1.55
Usp4P35123 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Usp4P35123 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Usp4P35123 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC5.36□□□□□ -1.55
Usp4P35123 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Usp4P35123 Olfr2-206ENSMUST00000216375 5828 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
Usp4P35123 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Usp4P35123 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Usp4P35123 Gm37488-201ENSMUST00000195434 3374 ntBASIC5.36□□□□□ -1.55
Usp4P35123 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC5.36□□□□□ -1.55
Usp4P35123 Gm23133-201ENSMUST00000104255 135 ntBASIC5.36□□□□□ -1.55
Usp4P35123 Gm24789-201ENSMUST00000104282 131 ntBASIC5.36□□□□□ -1.55
Usp4P35123 Gm7974-201ENSMUST00000117154 408 ntBASIC5.36□□□□□ -1.55
Usp4P35123 Gm15490-201ENSMUST00000119894 387 ntBASIC5.36□□□□□ -1.55
Usp4P35123 Gm16100-201ENSMUST00000120489 231 ntBASIC5.36□□□□□ -1.55
Usp4P35123 Gm16179-201ENSMUST00000120685 373 ntBASIC5.36□□□□□ -1.55
Usp4P35123 Gm6373-201ENSMUST00000121026 360 ntBASIC5.36□□□□□ -1.55
Usp4P35123 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Usp4P35123 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC5.36□□□□□ -1.55
Usp4P35123 Gm22236-201ENSMUST00000157093 106 ntBASIC5.36□□□□□ -1.55
Usp4P35123 Gm25430-201ENSMUST00000157614 289 ntBASIC5.36□□□□□ -1.55
Usp4P35123 Gm24944-201ENSMUST00000158330 128 ntBASIC5.36□□□□□ -1.55
Usp4P35123 Gm26404-201ENSMUST00000158498 109 ntBASIC5.36□□□□□ -1.55
Usp4P35123 Gm4134-201ENSMUST00000173244 563 ntBASIC5.36□□□□□ -1.55
Usp4P35123 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Usp4P35123 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Usp4P35123 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Usp4P35123 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC5.36□□□□□ -1.55
Usp4P35123 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Usp4P35123 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC5.36□□□□□ -1.55
Usp4P35123 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC5.36□□□□□ -1.55
Usp4P35123 Gm28660-201ENSMUST00000186496 253 ntBASIC5.36□□□□□ -1.55
Usp4P35123 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC5.36□□□□□ -1.55
Usp4P35123 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC5.36□□□□□ -1.55
Usp4P35123 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC5.36□□□□□ -1.55
Usp4P35123 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC5.36□□□□□ -1.55
Usp4P35123 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC5.36□□□□□ -1.55
Usp4P35123 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC5.36□□□□□ -1.55
Usp4P35123 Gm5285-201ENSMUST00000193089 666 ntBASIC5.36□□□□□ -1.55
Usp4P35123 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Usp4P35123 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC5.36□□□□□ -1.55
Usp4P35123 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC5.36□□□□□ -1.55
Usp4P35123 Gm8874-201ENSMUST00000196826 286 ntBASIC5.36□□□□□ -1.55
Usp4P35123 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC5.36□□□□□ -1.55
Usp4P35123 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC5.36□□□□□ -1.55
Usp4P35123 AC153961.2-201ENSMUST00000218877 164 ntBASIC5.36□□□□□ -1.55
Usp4P35123 AC158803.2-201ENSMUST00000219452 679 ntBASIC5.36□□□□□ -1.55
Usp4P35123 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC5.36□□□□□ -1.55
Usp4P35123 AC153924.1-201ENSMUST00000220117 312 ntBASIC5.36□□□□□ -1.55
Usp4P35123 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Usp4P35123 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Usp4P35123 Olfr134-201ENSMUST00000074883 939 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Usp4P35123 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Usp4P35123 Gm23459-201ENSMUST00000083259 131 ntBASIC5.36□□□□□ -1.55
Usp4P35123 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Usp4P35123 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Usp4P35123 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Usp4P35123 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC5.36□□□□□ -1.55
Usp4P35123 Gm37767-201ENSMUST00000193239 1834 ntBASIC5.36□□□□□ -1.55
Usp4P35123 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Usp4P35123 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Usp4P35123 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC5.36□□□□□ -1.55
Usp4P35123 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC5.36□□□□□ -1.55
Usp4P35123 Gm42955-201ENSMUST00000197355 3393 ntBASIC5.36□□□□□ -1.55
Usp4P35123 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Usp4P35123 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Usp4P35123 Olfr362-202ENSMUST00000213817 4059 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Usp4P35123 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Usp4P35123 Gm37789-201ENSMUST00000192862 2889 ntBASIC5.35□□□□□ -1.55
Usp4P35123 Gm44678-201ENSMUST00000207828 2775 ntBASIC5.35□□□□□ -1.55
Usp4P35123 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
Usp4P35123 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Usp4P35123 Gm8267-201ENSMUST00000165003 1751 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Usp4P35123 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
Usp4P35123 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Usp4P35123 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC5.35□□□□□ -1.55
Usp4P35123 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Usp4P35123 Gm22266-201ENSMUST00000104011 138 ntBASIC5.35□□□□□ -1.55
Usp4P35123 Gm12878-201ENSMUST00000118744 332 ntBASIC5.35□□□□□ -1.55
Usp4P35123 Gm15113-201ENSMUST00000119280 836 ntBASIC5.35□□□□□ -1.55
Usp4P35123 Gm12007-201ENSMUST00000120978 597 ntBASIC5.35□□□□□ -1.55
Usp4P35123 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC5.35□□□□□ -1.55
Usp4P35123 Gm15428-201ENSMUST00000121352 333 ntBASIC5.35□□□□□ -1.55
Usp4P35123 Gm12755-201ENSMUST00000122297 282 ntBASIC5.35□□□□□ -1.55
Usp4P35123 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Usp4P35123 Gm23537-201ENSMUST00000157536 330 ntBASIC5.35□□□□□ -1.55
Usp4P35123 Gm15946-201ENSMUST00000160654 423 ntBASIC5.35□□□□□ -1.55
Usp4P35123 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Usp4P35123 Gm22355-201ENSMUST00000175531 96 ntBASIC5.35□□□□□ -1.55
Usp4P35123 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Usp4P35123 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC5.35□□□□□ -1.55
Usp4P35123 Mir6986-201ENSMUST00000184483 58 ntBASIC5.35□□□□□ -1.55
Usp4P35123 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC5.35□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms