Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 AC159297.1-201ENSMUST00000218689 290 ntBASIC4.24□□□□□ -1.73
Col2a1P28481 AC155830.1-201ENSMUST00000220050 3836 ntBASIC4.24□□□□□ -1.73
Col2a1P28481 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC4.24□□□□□ -1.73
Col2a1P28481 AC137950.3-201ENSMUST00000228250 246 ntBASIC4.24□□□□□ -1.73
Col2a1P28481 Sult6b1-201ENSMUST00000042683 839 ntTSL 5 BASIC4.24□□□□□ -1.73
Col2a1P28481 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Col2a1P28481 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC4.23□□□□□ -1.73
Col2a1P28481 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Col2a1P28481 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC4.23□□□□□ -1.73
Col2a1P28481 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Col2a1P28481 P2ry14-205ENSMUST00000197220 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Col2a1P28481 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC4.23□□□□□ -1.73
Col2a1P28481 Olfr823-202ENSMUST00000213145 1431 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Col2a1P28481 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC4.23□□□□□ -1.73
Col2a1P28481 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Col2a1P28481 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Col2a1P28481 Gm26140-201ENSMUST00000103807 110 ntBASIC4.23□□□□□ -1.73
Col2a1P28481 Gm14816-201ENSMUST00000117174 294 ntBASIC4.23□□□□□ -1.73
Col2a1P28481 Gm4596-201ENSMUST00000117197 442 ntBASIC4.23□□□□□ -1.73
Col2a1P28481 Gm12005-201ENSMUST00000121451 379 ntBASIC4.23□□□□□ -1.73
Col2a1P28481 Gm12276-201ENSMUST00000121709 301 ntBASIC4.23□□□□□ -1.73
Col2a1P28481 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC4.23□□□□□ -1.73
Col2a1P28481 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Col2a1P28481 Gm20767-201ENSMUST00000179071 510 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Col2a1P28481 Gm2617-201ENSMUST00000185690 1066 ntBASIC4.23□□□□□ -1.73
Col2a1P28481 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC4.23□□□□□ -1.73
Col2a1P28481 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC4.23□□□□□ -1.73
Col2a1P28481 Gm43941-201ENSMUST00000203303 1073 ntBASIC4.23□□□□□ -1.73
Col2a1P28481 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC4.23□□□□□ -1.73
Col2a1P28481 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Col2a1P28481 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC4.23□□□□□ -1.73
Col2a1P28481 AC140368.1-202ENSMUST00000226131 658 ntBASIC4.23□□□□□ -1.73
Col2a1P28481 AC154598.1-201ENSMUST00000227079 347 ntBASIC4.23□□□□□ -1.73
Col2a1P28481 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Col2a1P28481 Gm23925-201ENSMUST00000082471 132 ntBASIC4.23□□□□□ -1.73
Col2a1P28481 AC113059.2-201ENSMUST00000213462 3016 ntBASIC4.23□□□□□ -1.73
Col2a1P28481 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
Col2a1P28481 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Col2a1P28481 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Col2a1P28481 AC153522.2-201ENSMUST00000218389 3853 ntBASIC4.22□□□□□ -1.73
Col2a1P28481 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
Col2a1P28481 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC4.22□□□□□ -1.73
Col2a1P28481 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
Col2a1P28481 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Col2a1P28481 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Col2a1P28481 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC4.22□□□□□ -1.73
Col2a1P28481 Gm8244-201ENSMUST00000121254 264 ntBASIC4.22□□□□□ -1.73
Col2a1P28481 Gm13459-201ENSMUST00000121558 646 ntBASIC4.22□□□□□ -1.73
Col2a1P28481 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC4.22□□□□□ -1.73
Col2a1P28481 Gm16327-201ENSMUST00000137146 228 ntBASIC4.22□□□□□ -1.73
Col2a1P28481 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC4.22□□□□□ -1.73
Col2a1P28481 Gm23231-201ENSMUST00000157299 104 ntBASIC4.22□□□□□ -1.73
Col2a1P28481 Gm23123-201ENSMUST00000157648 144 ntBASIC4.22□□□□□ -1.73
Col2a1P28481 Gm24008-201ENSMUST00000157733 138 ntBASIC4.22□□□□□ -1.73
Col2a1P28481 Gm24727-201ENSMUST00000158231 144 ntBASIC4.22□□□□□ -1.73
Col2a1P28481 Mir3070b-201ENSMUST00000175205 89 ntBASIC4.22□□□□□ -1.73
Col2a1P28481 Gm25535-201ENSMUST00000175364 125 ntBASIC4.22□□□□□ -1.73
Col2a1P28481 Gm4479-201ENSMUST00000178807 171 ntBASIC4.22□□□□□ -1.73
Col2a1P28481 Gm42832-201ENSMUST00000196361 745 ntBASIC4.22□□□□□ -1.73
Col2a1P28481 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC4.22□□□□□ -1.73
Col2a1P28481 Gm43930-201ENSMUST00000203868 845 ntBASIC4.22□□□□□ -1.73
Col2a1P28481 Snord35b-201ENSMUST00000082833 87 ntBASIC4.22□□□□□ -1.73
Col2a1P28481 Gm10161-201ENSMUST00000091506 204 ntBASIC4.22□□□□□ -1.73
Col2a1P28481 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Col2a1P28481 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Col2a1P28481 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
Col2a1P28481 Olfr1263-204ENSMUST00000217065 4186 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Col2a1P28481 AC153948.1-201ENSMUST00000219080 3838 ntBASIC4.22□□□□□ -1.73
Col2a1P28481 Gm18359-201ENSMUST00000173024 1459 ntBASIC4.21□□□□□ -1.73
Col2a1P28481 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
Col2a1P28481 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC4.21□□□□□ -1.73
Col2a1P28481 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
Col2a1P28481 AC124586.1-201ENSMUST00000221673 2795 ntBASIC4.21□□□□□ -1.73
Col2a1P28481 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC4.21□□□□□ -1.73
Col2a1P28481 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Col2a1P28481 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Col2a1P28481 AC164102.1-201ENSMUST00000220524 1553 ntBASIC4.21□□□□□ -1.74
Col2a1P28481 Gm37792-201ENSMUST00000195761 3413 ntBASIC4.21□□□□□ -1.74
Col2a1P28481 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col2a1P28481 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col2a1P28481 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col2a1P28481 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC4.21□□□□□ -1.74
Col2a1P28481 Gm3543-201ENSMUST00000111870 899 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
Col2a1P28481 Gm13924-201ENSMUST00000119899 486 ntBASIC4.21□□□□□ -1.74
Col2a1P28481 Gm14739-201ENSMUST00000120424 802 ntBASIC4.21□□□□□ -1.74
Col2a1P28481 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Col2a1P28481 Gm22885-201ENSMUST00000157410 107 ntBASIC4.21□□□□□ -1.74
Col2a1P28481 Gm16303-201ENSMUST00000161498 390 ntBASIC4.21□□□□□ -1.74
Col2a1P28481 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Col2a1P28481 Mir7682-201ENSMUST00000198467 58 ntBASIC4.21□□□□□ -1.74
Col2a1P28481 Gm2189-201ENSMUST00000201419 429 ntBASIC4.21□□□□□ -1.74
Col2a1P28481 AL772397.1-201ENSMUST00000216707 606 ntBASIC4.21□□□□□ -1.74
Col2a1P28481 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Col2a1P28481 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Col2a1P28481 Gm44860-201ENSMUST00000208473 2346 ntBASIC4.21□□□□□ -1.74
Col2a1P28481 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
Col2a1P28481 Gm43648-201ENSMUST00000197775 2485 ntBASIC4.21□□□□□ -1.74
Col2a1P28481 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col2a1P28481 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col2a1P28481 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 168.4 ms