Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm7656-201ENSMUST00000182468 1004 ntBASIC3.34□□□□□ -1.87
Sdc1P18828 Gm7497-201ENSMUST00000183064 1003 ntBASIC3.34□□□□□ -1.87
Sdc1P18828 Gm28385-201ENSMUST00000185671 292 ntBASIC3.34□□□□□ -1.87
Sdc1P18828 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC3.34□□□□□ -1.87
Sdc1P18828 Gm20954-201ENSMUST00000189078 644 ntBASIC3.34□□□□□ -1.87
Sdc1P18828 Gm38098-201ENSMUST00000194115 241 ntBASIC3.34□□□□□ -1.87
Sdc1P18828 Gm36939-201ENSMUST00000194889 439 ntBASIC3.34□□□□□ -1.87
Sdc1P18828 Ighv8-1-201ENSMUST00000194897 291 ntBASIC3.34□□□□□ -1.87
Sdc1P18828 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC3.34□□□□□ -1.87
Sdc1P18828 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC3.34□□□□□ -1.87
Sdc1P18828 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC3.34□□□□□ -1.87
Sdc1P18828 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC3.34□□□□□ -1.87
Sdc1P18828 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC3.34□□□□□ -1.87
Sdc1P18828 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.34□□□□□ -1.87
Sdc1P18828 AC154441.1-201ENSMUST00000223653 1006 ntBASIC3.34□□□□□ -1.87
Sdc1P18828 AL672194.1-201ENSMUST00000224841 603 ntBASIC3.34□□□□□ -1.87
Sdc1P18828 AC090496.1-201ENSMUST00000226020 260 ntBASIC3.34□□□□□ -1.87
Sdc1P18828 AC114572.1-201ENSMUST00000227262 300 ntBASIC3.34□□□□□ -1.87
Sdc1P18828 Gm6863-201ENSMUST00000052882 636 ntBASIC3.34□□□□□ -1.87
Sdc1P18828 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC3.34□□□□□ -1.87
Sdc1P18828 4930504O13Rik-201ENSMUST00000064614 549 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Sdc1P18828 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Sdc1P18828 Olfr1472-201ENSMUST00000077501 945 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Sdc1P18828 Olfr1148-201ENSMUST00000077580 945 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Sdc1P18828 Olfr1475-201ENSMUST00000080801 945 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Sdc1P18828 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Sdc1P18828 Olfr1029-201ENSMUST00000082191 1061 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Sdc1P18828 Gm23975-201ENSMUST00000082685 106 ntBASIC3.34□□□□□ -1.87
Sdc1P18828 Mir218-2-201ENSMUST00000083649 110 ntBASIC3.34□□□□□ -1.87
Sdc1P18828 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Sdc1P18828 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
Sdc1P18828 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Sdc1P18828 AC154681.1-201ENSMUST00000225876 1735 ntBASIC3.33□□□□□ -1.88
Sdc1P18828 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
Sdc1P18828 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Sdc1P18828 Gm43834-201ENSMUST00000197097 4830 ntBASIC3.33□□□□□ -1.88
Sdc1P18828 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC3.33□□□□□ -1.88
Sdc1P18828 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC3.33□□□□□ -1.88
Sdc1P18828 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
Sdc1P18828 Gm22778-201ENSMUST00000104090 128 ntBASIC3.33□□□□□ -1.88
Sdc1P18828 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Sdc1P18828 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
Sdc1P18828 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Sdc1P18828 Xlr5d-ps-201ENSMUST00000117501 782 ntBASIC3.33□□□□□ -1.88
Sdc1P18828 Gm6797-201ENSMUST00000119440 512 ntBASIC3.33□□□□□ -1.88
Sdc1P18828 Gm16471-201ENSMUST00000121940 618 ntBASIC3.33□□□□□ -1.88
Sdc1P18828 Gm14903-201ENSMUST00000122435 537 ntBASIC3.33□□□□□ -1.88
Sdc1P18828 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC3.33□□□□□ -1.88
Sdc1P18828 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC3.33□□□□□ -1.88
Sdc1P18828 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC3.33□□□□□ -1.88
Sdc1P18828 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Sdc1P18828 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC3.33□□□□□ -1.88
Sdc1P18828 Gm24002-201ENSMUST00000158456 104 ntBASIC3.33□□□□□ -1.88
Sdc1P18828 Gm16147-201ENSMUST00000162143 373 ntBASIC3.33□□□□□ -1.88
Sdc1P18828 Gm8653-201ENSMUST00000163096 924 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Sdc1P18828 Vmn1r117-201ENSMUST00000166937 924 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Sdc1P18828 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
Sdc1P18828 Gm6164-201ENSMUST00000169774 924 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Sdc1P18828 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC3.33□□□□□ -1.88
Sdc1P18828 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Sdc1P18828 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC3.33□□□□□ -1.88
Sdc1P18828 Gm27538-201ENSMUST00000185065 294 ntBASIC3.33□□□□□ -1.88
Sdc1P18828 1700109I08Rik-201ENSMUST00000185680 396 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Sdc1P18828 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC3.33□□□□□ -1.88
Sdc1P18828 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC3.33□□□□□ -1.88
Sdc1P18828 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC3.33□□□□□ -1.88
Sdc1P18828 Gm37815-201ENSMUST00000195665 411 ntTSL 5 BASIC3.33□□□□□ -1.88
Sdc1P18828 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Sdc1P18828 Gm7041-201ENSMUST00000201227 524 ntBASIC3.33□□□□□ -1.88
Sdc1P18828 Gm5876-201ENSMUST00000203735 243 ntBASIC3.33□□□□□ -1.88
Sdc1P18828 Gm18540-201ENSMUST00000204025 526 ntBASIC3.33□□□□□ -1.88
Sdc1P18828 Gm44703-201ENSMUST00000205724 248 ntBASIC3.33□□□□□ -1.88
Sdc1P18828 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Sdc1P18828 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC3.33□□□□□ -1.88
Sdc1P18828 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Sdc1P18828 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC3.33□□□□□ -1.88
Sdc1P18828 AC160970.1-201ENSMUST00000219311 475 ntBASIC3.33□□□□□ -1.88
Sdc1P18828 AC153662.1-201ENSMUST00000222220 270 ntBASIC3.33□□□□□ -1.88
Sdc1P18828 AC173481.1-201ENSMUST00000223351 270 ntBASIC3.33□□□□□ -1.88
Sdc1P18828 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Sdc1P18828 Olfr589-201ENSMUST00000061055 954 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Sdc1P18828 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Sdc1P18828 Olfr798-201ENSMUST00000079810 936 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Sdc1P18828 n-R5s36-201ENSMUST00000082998 119 ntBASIC3.33□□□□□ -1.88
Sdc1P18828 Mir342-201ENSMUST00000083502 99 ntBASIC3.33□□□□□ -1.88
Sdc1P18828 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Sdc1P18828 Gm10287-202ENSMUST00000180599 4059 ntBASIC3.33□□□□□ -1.88
Sdc1P18828 Gm18432-201ENSMUST00000195568 1451 ntBASIC3.33□□□□□ -1.88
Sdc1P18828 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Sdc1P18828 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
Sdc1P18828 Gm43870-201ENSMUST00000205102 4369 ntBASIC3.33□□□□□ -1.88
Sdc1P18828 Gm14421-201ENSMUST00000121755 1958 ntBASIC3.32□□□□□ -1.88
Sdc1P18828 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Sdc1P18828 AC122840.2-201ENSMUST00000221030 2659 ntBASIC3.32□□□□□ -1.88
Sdc1P18828 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Sdc1P18828 Mir804-201ENSMUST00000103251 95 ntBASIC3.32□□□□□ -1.88
Sdc1P18828 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
Sdc1P18828 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Sdc1P18828 Gm11488-201ENSMUST00000117277 863 ntBASIC3.32□□□□□ -1.88
Sdc1P18828 Gm3943-201ENSMUST00000118606 718 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 90.2 ms