Protein–RNA interactions for Protein: P10628

Hoxd4, Homeobox protein Hox-D4, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd4P10628 Agps-203ENSMUST00000175646 1839 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Hoxd4P10628 Gm15624-203ENSMUST00000204811 3402 ntBASIC4.8□□□□□ -1.64
Hoxd4P10628 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC4.8□□□□□ -1.64
Hoxd4P10628 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC4.8□□□□□ -1.64
Hoxd4P10628 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Hoxd4P10628 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Hoxd4P10628 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Hoxd4P10628 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Hoxd4P10628 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC4.8□□□□□ -1.64
Hoxd4P10628 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC4.8□□□□□ -1.64
Hoxd4P10628 Gm2987-201ENSMUST00000187673 1693 ntBASIC4.8□□□□□ -1.64
Hoxd4P10628 Gm42910-201ENSMUST00000198917 2921 ntBASIC4.79□□□□□ -1.64
Hoxd4P10628 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Hoxd4P10628 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Hoxd4P10628 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Hoxd4P10628 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Hoxd4P10628 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Hoxd4P10628 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Hoxd4P10628 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Hoxd4P10628 Olfr919-203ENSMUST00000217508 1843 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Hoxd4P10628 AC158388.2-201ENSMUST00000223665 1314 ntBASIC4.79□□□□□ -1.64
Hoxd4P10628 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
Hoxd4P10628 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Hoxd4P10628 AC116557.1-201ENSMUST00000219494 1521 ntBASIC4.79□□□□□ -1.64
Hoxd4P10628 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC4.79□□□□□ -1.64
Hoxd4P10628 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC4.79□□□□□ -1.64
Hoxd4P10628 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Hoxd4P10628 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC4.79□□□□□ -1.64
Hoxd4P10628 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
Hoxd4P10628 Gm23988-201ENSMUST00000117034 122 ntBASIC4.79□□□□□ -1.64
Hoxd4P10628 Gm14930-201ENSMUST00000118864 652 ntBASIC4.79□□□□□ -1.64
Hoxd4P10628 Gm11742-201ENSMUST00000119903 233 ntBASIC4.79□□□□□ -1.64
Hoxd4P10628 Mup-ps28-201ENSMUST00000120686 289 ntBASIC4.79□□□□□ -1.64
Hoxd4P10628 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC4.79□□□□□ -1.64
Hoxd4P10628 Gm11805-201ENSMUST00000121238 600 ntBASIC4.79□□□□□ -1.64
Hoxd4P10628 Gm7931-201ENSMUST00000121537 271 ntBASIC4.79□□□□□ -1.64
Hoxd4P10628 Gm14695-201ENSMUST00000121721 282 ntBASIC4.79□□□□□ -1.64
Hoxd4P10628 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC4.79□□□□□ -1.64
Hoxd4P10628 Gm4487-201ENSMUST00000150617 442 ntBASIC4.79□□□□□ -1.64
Hoxd4P10628 Il2ra-202ENSMUST00000150890 1013 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Hoxd4P10628 Gm24192-201ENSMUST00000157978 145 ntBASIC4.79□□□□□ -1.64
Hoxd4P10628 Gm25433-201ENSMUST00000158283 286 ntBASIC4.79□□□□□ -1.64
Hoxd4P10628 Gm23408-201ENSMUST00000158523 265 ntBASIC4.79□□□□□ -1.64
Hoxd4P10628 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Hoxd4P10628 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC4.79□□□□□ -1.64
Hoxd4P10628 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC4.79□□□□□ -1.64
Hoxd4P10628 Gm27030-201ENSMUST00000182551 464 ntBASIC4.79□□□□□ -1.64
Hoxd4P10628 Mir7008-201ENSMUST00000184398 63 ntBASIC4.79□□□□□ -1.64
Hoxd4P10628 Mir7674-201ENSMUST00000184964 63 ntBASIC4.79□□□□□ -1.64
Hoxd4P10628 Gm17929-201ENSMUST00000186851 627 ntBASIC4.79□□□□□ -1.64
Hoxd4P10628 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC4.79□□□□□ -1.64
Hoxd4P10628 Gm6510-201ENSMUST00000195916 574 ntBASIC4.79□□□□□ -1.64
Hoxd4P10628 Gm43043-201ENSMUST00000196579 412 ntBASIC4.79□□□□□ -1.64
Hoxd4P10628 Gm20940-201ENSMUST00000197308 360 ntBASIC4.79□□□□□ -1.64
Hoxd4P10628 Mir6906-201ENSMUST00000198998 58 ntBASIC4.79□□□□□ -1.64
Hoxd4P10628 Gm42666-201ENSMUST00000201954 152 ntBASIC4.79□□□□□ -1.64
Hoxd4P10628 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC4.79□□□□□ -1.64
Hoxd4P10628 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC4.79□□□□□ -1.64
Hoxd4P10628 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC4.79□□□□□ -1.64
Hoxd4P10628 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC4.79□□□□□ -1.64
Hoxd4P10628 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC4.79□□□□□ -1.64
Hoxd4P10628 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC4.79□□□□□ -1.64
Hoxd4P10628 AC133650.1-201ENSMUST00000217243 578 ntBASIC4.79□□□□□ -1.64
Hoxd4P10628 AC154640.2-201ENSMUST00000226324 472 ntBASIC4.79□□□□□ -1.64
Hoxd4P10628 Snora44-201ENSMUST00000082670 129 ntBASIC4.79□□□□□ -1.64
Hoxd4P10628 Gm23511-201ENSMUST00000083084 164 ntBASIC4.79□□□□□ -1.64
Hoxd4P10628 Vmn1r71-202ENSMUST00000226874 5194 ntAPPRIS P2 BASIC4.79□□□□□ -1.64
Hoxd4P10628 Gm5925-201ENSMUST00000105016 1497 ntBASIC4.79□□□□□ -1.64
Hoxd4P10628 Gm28082-201ENSMUST00000185683 1499 ntTSL 5 BASIC4.79□□□□□ -1.64
Hoxd4P10628 Gm28679-201ENSMUST00000186013 1499 ntTSL 5 BASIC4.79□□□□□ -1.64
Hoxd4P10628 Gm28135-201ENSMUST00000186847 1499 ntTSL 5 BASIC4.79□□□□□ -1.64
Hoxd4P10628 Gm28291-202ENSMUST00000186921 1499 ntTSL 5 BASIC4.79□□□□□ -1.64
Hoxd4P10628 Gm29219-201ENSMUST00000187224 1499 ntTSL 5 BASIC4.79□□□□□ -1.64
Hoxd4P10628 Gm29547-201ENSMUST00000187258 1499 ntTSL 5 BASIC4.79□□□□□ -1.64
Hoxd4P10628 Gm28225-201ENSMUST00000187730 1499 ntTSL 5 BASIC4.79□□□□□ -1.64
Hoxd4P10628 Gm29297-202ENSMUST00000188186 1499 ntTSL 5 BASIC4.79□□□□□ -1.64
Hoxd4P10628 Gm28236-203ENSMUST00000188311 1499 ntTSL 5 BASIC4.79□□□□□ -1.64
Hoxd4P10628 Gm29070-202ENSMUST00000188541 1499 ntTSL 5 BASIC4.79□□□□□ -1.64
Hoxd4P10628 Gm29265-201ENSMUST00000188697 1499 ntTSL 5 BASIC4.79□□□□□ -1.64
Hoxd4P10628 Gm28947-203ENSMUST00000188701 1499 ntTSL 5 BASIC4.79□□□□□ -1.64
Hoxd4P10628 Gm29616-201ENSMUST00000188777 1499 ntTSL 5 BASIC4.79□□□□□ -1.64
Hoxd4P10628 Gm29162-202ENSMUST00000188893 1499 ntTSL 5 BASIC4.79□□□□□ -1.64
Hoxd4P10628 Gm28454-203ENSMUST00000190183 1495 ntTSL 5 BASIC4.79□□□□□ -1.64
Hoxd4P10628 Gm28842-202ENSMUST00000190289 1499 ntTSL 5 BASIC4.79□□□□□ -1.64
Hoxd4P10628 Gm28633-202ENSMUST00000190867 1485 ntTSL 5 BASIC4.79□□□□□ -1.64
Hoxd4P10628 Gm28632-202ENSMUST00000191193 1499 ntTSL 5 BASIC4.79□□□□□ -1.64
Hoxd4P10628 Gm28245-203ENSMUST00000191551 1495 ntTSL 5 BASIC4.79□□□□□ -1.64
Hoxd4P10628 Gm42841-201ENSMUST00000199806 1932 ntBASIC4.79□□□□□ -1.64
Hoxd4P10628 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Hoxd4P10628 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Hoxd4P10628 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC4.79□□□□□ -1.64
Hoxd4P10628 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Hoxd4P10628 Gm37205-201ENSMUST00000194820 2736 ntBASIC4.79□□□□□ -1.64
Hoxd4P10628 AC154640.4-201ENSMUST00000226647 4640 ntBASIC4.79□□□□□ -1.64
Hoxd4P10628 Olfr685-203ENSMUST00000214712 3326 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Hoxd4P10628 Gm20172-201ENSMUST00000193138 1551 ntBASIC4.78□□□□□ -1.64
Hoxd4P10628 Fcrl5-203ENSMUST00000178261 1791 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Hoxd4P10628 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Hoxd4P10628 Fcrl5-201ENSMUST00000049926 1791 ntAPPRIS P4 TSL 5 BASIC4.78□□□□□ -1.64
Hoxd4P10628 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms