Protein–RNA interactions for Protein: O55187

Cbx4, E3 SUMO-protein ligase CBX4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4O55187 Gm45710-201ENSMUST00000212847 215 ntBASIC4.45□□□□□ -1.7
Cbx4O55187 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Cbx4O55187 Gm46234-201ENSMUST00000218702 259 ntBASIC4.45□□□□□ -1.7
Cbx4O55187 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC4.45□□□□□ -1.7
Cbx4O55187 AC166358.4-201ENSMUST00000223030 105 ntBASIC4.45□□□□□ -1.7
Cbx4O55187 CT009550.5-201ENSMUST00000226286 382 ntBASIC4.45□□□□□ -1.7
Cbx4O55187 Olfr134-201ENSMUST00000074883 939 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Cbx4O55187 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Cbx4O55187 Gm38259-201ENSMUST00000194602 3534 ntBASIC4.45□□□□□ -1.7
Cbx4O55187 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Cbx4O55187 Mapk8-203ENSMUST00000111943 1310 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Cbx4O55187 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
Cbx4O55187 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Cbx4O55187 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC4.44□□□□□ -1.7
Cbx4O55187 Gm37053-201ENSMUST00000192399 2087 ntBASIC4.44□□□□□ -1.7
Cbx4O55187 Gm37329-201ENSMUST00000192973 2057 ntBASIC4.44□□□□□ -1.7
Cbx4O55187 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Cbx4O55187 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Cbx4O55187 Olfr1217-203ENSMUST00000214022 3947 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
Cbx4O55187 Gm22899-201ENSMUST00000104540 131 ntBASIC4.44□□□□□ -1.7
Cbx4O55187 Gm17132-201ENSMUST00000109542 1158 ntBASIC4.44□□□□□ -1.7
Cbx4O55187 Gm4596-201ENSMUST00000117197 442 ntBASIC4.44□□□□□ -1.7
Cbx4O55187 Gm14750-201ENSMUST00000118262 516 ntBASIC4.44□□□□□ -1.7
Cbx4O55187 Gm13640-201ENSMUST00000118445 264 ntBASIC4.44□□□□□ -1.7
Cbx4O55187 Gm12237-201ENSMUST00000120158 470 ntBASIC4.44□□□□□ -1.7
Cbx4O55187 Gm5353-201ENSMUST00000139800 793 ntBASIC4.44□□□□□ -1.7
Cbx4O55187 Gm12735-201ENSMUST00000146218 651 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Cbx4O55187 Gm16114-201ENSMUST00000161930 300 ntBASIC4.44□□□□□ -1.7
Cbx4O55187 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Cbx4O55187 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Cbx4O55187 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC4.44□□□□□ -1.7
Cbx4O55187 Gm24925-201ENSMUST00000178157 107 ntBASIC4.44□□□□□ -1.7
Cbx4O55187 Mup-ps7-201ENSMUST00000178292 545 ntBASIC4.44□□□□□ -1.7
Cbx4O55187 Mup-ps8-201ENSMUST00000178663 545 ntBASIC4.44□□□□□ -1.7
Cbx4O55187 Mup-ps9-201ENSMUST00000178847 545 ntBASIC4.44□□□□□ -1.7
Cbx4O55187 Mup-ps6-201ENSMUST00000179564 545 ntBASIC4.44□□□□□ -1.7
Cbx4O55187 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Cbx4O55187 Il3-201ENSMUST00000019058 629 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Cbx4O55187 AC133189.1-201ENSMUST00000198820 140 ntBASIC4.44□□□□□ -1.7
Cbx4O55187 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC4.44□□□□□ -1.7
Cbx4O55187 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC4.44□□□□□ -1.7
Cbx4O55187 Gm19096-201ENSMUST00000209705 766 ntBASIC4.44□□□□□ -1.7
Cbx4O55187 Gm17850-201ENSMUST00000210023 1154 ntBASIC4.44□□□□□ -1.7
Cbx4O55187 AC121844.1-201ENSMUST00000218706 137 ntBASIC4.44□□□□□ -1.7
Cbx4O55187 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC4.44□□□□□ -1.7
Cbx4O55187 Gm3338-201ENSMUST00000220982 269 ntBASIC4.44□□□□□ -1.7
Cbx4O55187 Gm9628-201ENSMUST00000222169 725 ntBASIC4.44□□□□□ -1.7
Cbx4O55187 AC124524.2-201ENSMUST00000223940 588 ntBASIC4.44□□□□□ -1.7
Cbx4O55187 AC154738.2-201ENSMUST00000227403 1110 ntBASIC4.44□□□□□ -1.7
Cbx4O55187 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Cbx4O55187 Mir16-2-201ENSMUST00000083672 95 ntBASIC4.44□□□□□ -1.7
Cbx4O55187 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Cbx4O55187 Gm21286-201ENSMUST00000098035 545 ntBASIC4.44□□□□□ -1.7
Cbx4O55187 Defa-ps18-201ENSMUST00000098889 371 ntBASIC4.44□□□□□ -1.7
Cbx4O55187 Gm15304-201ENSMUST00000122150 2640 ntBASIC4.44□□□□□ -1.7
Cbx4O55187 B930086L07Rik-201ENSMUST00000209529 3738 ntBASIC4.44□□□□□ -1.7
Cbx4O55187 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Cbx4O55187 Hbp1-204ENSMUST00000175686 1315 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Cbx4O55187 Gm43329-201ENSMUST00000200120 3232 ntBASIC4.44□□□□□ -1.7
Cbx4O55187 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
Cbx4O55187 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Cbx4O55187 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
Cbx4O55187 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC4.43□□□□□ -1.7
Cbx4O55187 AC160931.3-201ENSMUST00000222111 2267 ntBASIC4.43□□□□□ -1.7
Cbx4O55187 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Cbx4O55187 Gm43668-201ENSMUST00000197014 5342 ntBASIC4.43□□□□□ -1.7
Cbx4O55187 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Cbx4O55187 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Cbx4O55187 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Cbx4O55187 Gm12393-201ENSMUST00000117084 848 ntBASIC4.43□□□□□ -1.7
Cbx4O55187 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Cbx4O55187 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC4.43□□□□□ -1.7
Cbx4O55187 Gm23754-201ENSMUST00000157576 63 ntBASIC4.43□□□□□ -1.7
Cbx4O55187 Gm2855-201ENSMUST00000166765 456 ntBASIC4.43□□□□□ -1.7
Cbx4O55187 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC4.43□□□□□ -1.7
Cbx4O55187 Gm6214-201ENSMUST00000178845 541 ntBASIC4.43□□□□□ -1.7
Cbx4O55187 Gm5473-201ENSMUST00000179326 642 ntBASIC4.43□□□□□ -1.7
Cbx4O55187 Gm21850-201ENSMUST00000179792 359 ntBASIC4.43□□□□□ -1.7
Cbx4O55187 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Cbx4O55187 Gm27457-201ENSMUST00000184771 156 ntBASIC4.43□□□□□ -1.7
Cbx4O55187 Gm4412-201ENSMUST00000186660 433 ntBASIC4.43□□□□□ -1.7
Cbx4O55187 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Cbx4O55187 Gm28830-201ENSMUST00000188192 213 ntBASIC4.43□□□□□ -1.7
Cbx4O55187 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC4.43□□□□□ -1.7
Cbx4O55187 Gm29475-201ENSMUST00000190767 312 ntBASIC4.43□□□□□ -1.7
Cbx4O55187 Gm8458-201ENSMUST00000196658 819 ntBASIC4.43□□□□□ -1.7
Cbx4O55187 Gm43304-201ENSMUST00000196803 326 ntBASIC4.43□□□□□ -1.7
Cbx4O55187 Gm42720-201ENSMUST00000196813 300 ntBASIC4.43□□□□□ -1.7
Cbx4O55187 AC174780.1-201ENSMUST00000199415 1107 ntBASIC4.43□□□□□ -1.7
Cbx4O55187 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Cbx4O55187 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC4.43□□□□□ -1.7
Cbx4O55187 Gm29920-201ENSMUST00000206876 754 ntBASIC4.43□□□□□ -1.7
Cbx4O55187 Gm45236-201ENSMUST00000208632 229 ntBASIC4.43□□□□□ -1.7
Cbx4O55187 AC153957.1-201ENSMUST00000215235 229 ntBASIC4.43□□□□□ -1.7
Cbx4O55187 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC4.43□□□□□ -1.7
Cbx4O55187 Gm18729-201ENSMUST00000217230 621 ntBASIC4.43□□□□□ -1.7
Cbx4O55187 AC079644.1-201ENSMUST00000220586 405 ntBASIC4.43□□□□□ -1.7
Cbx4O55187 Gm46996-201ENSMUST00000220924 408 ntBASIC4.43□□□□□ -1.7
Cbx4O55187 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC4.43□□□□□ -1.7
Cbx4O55187 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 91.3 ms