Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 AC151907.1-201ENSMUST00000228812 412 ntBASIC3.09□□□□□ -1.91
Hmgb3O54879 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Hmgb3O54879 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Hmgb3O54879 Olfr798-201ENSMUST00000079810 936 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Hmgb3O54879 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Hmgb3O54879 Gm23443-201ENSMUST00000082916 128 ntBASIC3.09□□□□□ -1.91
Hmgb3O54879 Epyc-201ENSMUST00000020094 1723 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Hmgb3O54879 Gm42481-201ENSMUST00000196822 2178 ntBASIC3.09□□□□□ -1.91
Hmgb3O54879 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.09□□□□□ -1.92
Hmgb3O54879 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
Hmgb3O54879 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
Hmgb3O54879 Olfr1031-202ENSMUST00000216807 1946 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
Hmgb3O54879 AC112142.1-203ENSMUST00000228670 2472 ntBASIC3.09□□□□□ -1.92
Hmgb3O54879 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
Hmgb3O54879 Gm18493-201ENSMUST00000192084 1612 ntBASIC3.08□□□□□ -1.92
Hmgb3O54879 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Hmgb3O54879 Gm43443-201ENSMUST00000202337 2393 ntBASIC3.08□□□□□ -1.92
Hmgb3O54879 Lipe-203ENSMUST00000105177 1251 ntBASIC3.08□□□□□ -1.92
Hmgb3O54879 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
Hmgb3O54879 Gm13268-201ENSMUST00000117485 433 ntBASIC3.08□□□□□ -1.92
Hmgb3O54879 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC3.08□□□□□ -1.92
Hmgb3O54879 Gm14750-201ENSMUST00000118262 516 ntBASIC3.08□□□□□ -1.92
Hmgb3O54879 Gm11746-201ENSMUST00000119843 821 ntBASIC3.08□□□□□ -1.92
Hmgb3O54879 Gm13460-201ENSMUST00000121274 353 ntBASIC3.08□□□□□ -1.92
Hmgb3O54879 Llph-ps1-201ENSMUST00000121281 390 ntBASIC3.08□□□□□ -1.92
Hmgb3O54879 Gm14473-201ENSMUST00000122269 557 ntBASIC3.08□□□□□ -1.92
Hmgb3O54879 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC3.08□□□□□ -1.92
Hmgb3O54879 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC3.08□□□□□ -1.92
Hmgb3O54879 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Hmgb3O54879 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Hmgb3O54879 Gm24224-201ENSMUST00000158828 258 ntBASIC3.08□□□□□ -1.92
Hmgb3O54879 Vmn2r-ps121-201ENSMUST00000176230 802 ntBASIC3.08□□□□□ -1.92
Hmgb3O54879 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC3.08□□□□□ -1.92
Hmgb3O54879 Mir6996-201ENSMUST00000183922 61 ntBASIC3.08□□□□□ -1.92
Hmgb3O54879 Gm28153-201ENSMUST00000189853 629 ntTSL 3 BASIC3.08□□□□□ -1.92
Hmgb3O54879 Gm2622-201ENSMUST00000200018 471 ntBASIC3.08□□□□□ -1.92
Hmgb3O54879 Gm44330-201ENSMUST00000200106 143 ntBASIC3.08□□□□□ -1.92
Hmgb3O54879 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC3.08□□□□□ -1.92
Hmgb3O54879 Gm8745-201ENSMUST00000207846 782 ntBASIC3.08□□□□□ -1.92
Hmgb3O54879 Gm45367-201ENSMUST00000210171 347 ntBASIC3.08□□□□□ -1.92
Hmgb3O54879 AC100590.2-201ENSMUST00000219028 215 ntBASIC3.08□□□□□ -1.92
Hmgb3O54879 Olfr1496-203ENSMUST00000219412 1067 ntAPPRIS P2 BASIC3.08□□□□□ -1.92
Hmgb3O54879 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC3.08□□□□□ -1.92
Hmgb3O54879 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Hmgb3O54879 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC3.08□□□□□ -1.92
Hmgb3O54879 Olfr1496-201ENSMUST00000057390 1067 ntAPPRIS ALT1 BASIC3.08□□□□□ -1.92
Hmgb3O54879 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
Hmgb3O54879 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC3.08□□□□□ -1.92
Hmgb3O54879 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.08□□□□□ -1.92
Hmgb3O54879 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Hmgb3O54879 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Hmgb3O54879 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
Hmgb3O54879 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Hmgb3O54879 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Hmgb3O54879 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Hmgb3O54879 Gm37792-201ENSMUST00000195761 3413 ntBASIC3.07□□□□□ -1.92
Hmgb3O54879 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Hmgb3O54879 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC3.07□□□□□ -1.92
Hmgb3O54879 Gm11566-201ENSMUST00000118550 203 ntBASIC3.07□□□□□ -1.92
Hmgb3O54879 Olfr990-ps1-201ENSMUST00000120485 904 ntBASIC3.07□□□□□ -1.92
Hmgb3O54879 Gm14926-201ENSMUST00000120650 508 ntBASIC3.07□□□□□ -1.92
Hmgb3O54879 Gm14229-201ENSMUST00000121178 850 ntBASIC3.07□□□□□ -1.92
Hmgb3O54879 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC3.07□□□□□ -1.92
Hmgb3O54879 Gm24939-201ENSMUST00000158325 137 ntBASIC3.07□□□□□ -1.92
Hmgb3O54879 Gm24976-201ENSMUST00000158972 135 ntBASIC3.07□□□□□ -1.92
Hmgb3O54879 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC3.07□□□□□ -1.92
Hmgb3O54879 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC3.07□□□□□ -1.92
Hmgb3O54879 Gm15838-201ENSMUST00000161575 180 ntBASIC3.07□□□□□ -1.92
Hmgb3O54879 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Hmgb3O54879 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Hmgb3O54879 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Hmgb3O54879 Gm4207-201ENSMUST00000173144 960 ntBASIC3.07□□□□□ -1.92
Hmgb3O54879 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Hmgb3O54879 Gm25019-201ENSMUST00000179732 110 ntBASIC3.07□□□□□ -1.92
Hmgb3O54879 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC3.07□□□□□ -1.92
Hmgb3O54879 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC3.07□□□□□ -1.92
Hmgb3O54879 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Hmgb3O54879 Gm29228-201ENSMUST00000185489 418 ntBASIC3.07□□□□□ -1.92
Hmgb3O54879 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC3.07□□□□□ -1.92
Hmgb3O54879 Gm5829-201ENSMUST00000191383 351 ntBASIC3.07□□□□□ -1.92
Hmgb3O54879 Gm38234-201ENSMUST00000195204 421 ntBASIC3.07□□□□□ -1.92
Hmgb3O54879 Gm4644-201ENSMUST00000197587 400 ntBASIC3.07□□□□□ -1.92
Hmgb3O54879 Gm43155-201ENSMUST00000202661 494 ntBASIC3.07□□□□□ -1.92
Hmgb3O54879 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Hmgb3O54879 Gm44795-201ENSMUST00000205496 319 ntBASIC3.07□□□□□ -1.92
Hmgb3O54879 Gm5338-201ENSMUST00000209530 639 ntBASIC3.07□□□□□ -1.92
Hmgb3O54879 AC124399.1-201ENSMUST00000218334 590 ntBASIC3.07□□□□□ -1.92
Hmgb3O54879 AC110816.1-201ENSMUST00000218559 980 ntBASIC3.07□□□□□ -1.92
Hmgb3O54879 Gm31931-201ENSMUST00000219666 222 ntBASIC3.07□□□□□ -1.92
Hmgb3O54879 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Hmgb3O54879 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Hmgb3O54879 Olfr1136-201ENSMUST00000077471 1067 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Hmgb3O54879 Mir30e-201ENSMUST00000083475 92 ntBASIC3.07□□□□□ -1.92
Hmgb3O54879 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Hmgb3O54879 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Hmgb3O54879 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Hmgb3O54879 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Hmgb3O54879 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Hmgb3O54879 Mapk8-203ENSMUST00000111943 1310 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Hmgb3O54879 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms