Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 AC171206.1-201ENSMUST00000213612 213 ntBASIC3.83□□□□□ -1.8
Scn1aA2APX8 AC154313.1-201ENSMUST00000217755 3841 ntBASIC3.83□□□□□ -1.8
Scn1aA2APX8 Gm8633-201ENSMUST00000218457 558 ntTSL 3 BASIC3.83□□□□□ -1.8
Scn1aA2APX8 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC3.83□□□□□ -1.8
Scn1aA2APX8 Olfr1188-201ENSMUST00000090701 968 ntAPPRIS P2 BASIC3.83□□□□□ -1.8
Scn1aA2APX8 Olfr661-201ENSMUST00000098168 964 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Scn1aA2APX8 Olfr1471-205ENSMUST00000217482 1545 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Scn1aA2APX8 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
Scn1aA2APX8 Olfr963-202ENSMUST00000215649 2203 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Scn1aA2APX8 Gm3089-201ENSMUST00000200804 1395 ntBASIC3.82□□□□□ -1.8
Scn1aA2APX8 Gm3302-201ENSMUST00000201462 1395 ntBASIC3.82□□□□□ -1.8
Scn1aA2APX8 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Scn1aA2APX8 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
Scn1aA2APX8 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Scn1aA2APX8 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Scn1aA2APX8 Trav10-201ENSMUST00000103583 406 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Scn1aA2APX8 Gm12931-201ENSMUST00000117046 324 ntBASIC3.82□□□□□ -1.8
Scn1aA2APX8 Gm14050-201ENSMUST00000117052 346 ntBASIC3.82□□□□□ -1.8
Scn1aA2APX8 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC3.82□□□□□ -1.8
Scn1aA2APX8 Gm6079-201ENSMUST00000121356 404 ntBASIC3.82□□□□□ -1.8
Scn1aA2APX8 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC3.82□□□□□ -1.8
Scn1aA2APX8 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Scn1aA2APX8 2610001J05Rik-202ENSMUST00000155856 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Scn1aA2APX8 Gm29148-201ENSMUST00000188140 336 ntBASIC3.82□□□□□ -1.8
Scn1aA2APX8 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC3.82□□□□□ -1.8
Scn1aA2APX8 Gm45031-201ENSMUST00000206800 288 ntBASIC3.82□□□□□ -1.8
Scn1aA2APX8 Gm45327-201ENSMUST00000211612 565 ntBASIC3.82□□□□□ -1.8
Scn1aA2APX8 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC3.82□□□□□ -1.8
Scn1aA2APX8 AC159238.1-201ENSMUST00000220699 343 ntTSL 3 BASIC3.82□□□□□ -1.8
Scn1aA2APX8 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC3.82□□□□□ -1.8
Scn1aA2APX8 AC126253.2-201ENSMUST00000226518 205 ntBASIC3.82□□□□□ -1.8
Scn1aA2APX8 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
Scn1aA2APX8 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Scn1aA2APX8 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Scn1aA2APX8 Gm43883-201ENSMUST00000204002 3750 ntBASIC3.82□□□□□ -1.8
Scn1aA2APX8 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Scn1aA2APX8 Gm37628-201ENSMUST00000194644 5440 ntBASIC3.82□□□□□ -1.8
Scn1aA2APX8 Gm5943-201ENSMUST00000119458 459 ntBASIC3.82□□□□□ -1.8
Scn1aA2APX8 Gm14383-201ENSMUST00000121637 386 ntBASIC3.82□□□□□ -1.8
Scn1aA2APX8 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC3.82□□□□□ -1.8
Scn1aA2APX8 Gm25977-201ENSMUST00000158697 85 ntBASIC3.82□□□□□ -1.8
Scn1aA2APX8 V1rd19-201ENSMUST00000173571 1157 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Scn1aA2APX8 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Scn1aA2APX8 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Scn1aA2APX8 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC3.82□□□□□ -1.8
Scn1aA2APX8 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Scn1aA2APX8 Gm45420-201ENSMUST00000211243 425 ntBASIC3.82□□□□□ -1.8
Scn1aA2APX8 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Scn1aA2APX8 AC160865.1-201ENSMUST00000219873 151 ntBASIC3.82□□□□□ -1.8
Scn1aA2APX8 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Scn1aA2APX8 Fat3-201ENSMUST00000082170 18456 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Scn1aA2APX8 Gm10558-201ENSMUST00000147494 1661 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Scn1aA2APX8 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Scn1aA2APX8 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC3.81□□□□□ -1.8
Scn1aA2APX8 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Scn1aA2APX8 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Scn1aA2APX8 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Scn1aA2APX8 Gm37006-201ENSMUST00000195253 2674 ntBASIC3.81□□□□□ -1.8
Scn1aA2APX8 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
Scn1aA2APX8 Gm12985-201ENSMUST00000118376 183 ntBASIC3.81□□□□□ -1.8
Scn1aA2APX8 Gm8244-201ENSMUST00000121254 264 ntBASIC3.81□□□□□ -1.8
Scn1aA2APX8 Gm22034-201ENSMUST00000157283 134 ntBASIC3.81□□□□□ -1.8
Scn1aA2APX8 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
Scn1aA2APX8 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Scn1aA2APX8 Gm42832-201ENSMUST00000196361 745 ntBASIC3.81□□□□□ -1.8
Scn1aA2APX8 Gm43155-201ENSMUST00000202661 494 ntBASIC3.81□□□□□ -1.8
Scn1aA2APX8 Gm18487-201ENSMUST00000215826 878 ntBASIC3.81□□□□□ -1.8
Scn1aA2APX8 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Scn1aA2APX8 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC3.81□□□□□ -1.8
Scn1aA2APX8 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC3.81□□□□□ -1.8
Scn1aA2APX8 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Scn1aA2APX8 AC133101.1-201ENSMUST00000226939 1199 ntBASIC3.81□□□□□ -1.8
Scn1aA2APX8 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Scn1aA2APX8 Gm5185-201ENSMUST00000080271 619 ntBASIC3.81□□□□□ -1.8
Scn1aA2APX8 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Scn1aA2APX8 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Scn1aA2APX8 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Scn1aA2APX8 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Scn1aA2APX8 Gm9597-202ENSMUST00000227632 1387 ntBASIC3.81□□□□□ -1.8
Scn1aA2APX8 Gm44164-201ENSMUST00000203605 2561 ntBASIC3.81□□□□□ -1.8
Scn1aA2APX8 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Scn1aA2APX8 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Scn1aA2APX8 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Scn1aA2APX8 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Scn1aA2APX8 Gm24403-201ENSMUST00000104616 130 ntBASIC3.8□□□□□ -1.8
Scn1aA2APX8 4933400A11Rik-203ENSMUST00000112102 1101 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Scn1aA2APX8 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Scn1aA2APX8 Gm14102-201ENSMUST00000147678 464 ntTSL 2 BASIC3.8□□□□□ -1.8
Scn1aA2APX8 Gm24553-201ENSMUST00000158653 131 ntBASIC3.8□□□□□ -1.8
Scn1aA2APX8 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Scn1aA2APX8 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC3.8□□□□□ -1.8
Scn1aA2APX8 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC3.8□□□□□ -1.8
Scn1aA2APX8 Gm37698-201ENSMUST00000192605 463 ntBASIC3.8□□□□□ -1.8
Scn1aA2APX8 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC3.8□□□□□ -1.8
Scn1aA2APX8 CT025680.1-201ENSMUST00000217375 375 ntBASIC3.8□□□□□ -1.8
Scn1aA2APX8 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC3.8□□□□□ -1.8
Scn1aA2APX8 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Scn1aA2APX8 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
Scn1aA2APX8 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Scn1aA2APX8 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms