Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC3.82□□□□□ -1.8
Lima1Q9ERG0 Gm18303-201ENSMUST00000190055 1176 ntBASIC3.82□□□□□ -1.8
Lima1Q9ERG0 Gm28396-201ENSMUST00000190309 379 ntBASIC3.82□□□□□ -1.8
Lima1Q9ERG0 Gm18900-201ENSMUST00000193218 584 ntBASIC3.82□□□□□ -1.8
Lima1Q9ERG0 Gm38332-201ENSMUST00000194189 147 ntBASIC3.82□□□□□ -1.8
Lima1Q9ERG0 Gm37830-201ENSMUST00000195282 837 ntTSL 5 BASIC3.82□□□□□ -1.8
Lima1Q9ERG0 Gm36954-201ENSMUST00000195362 363 ntBASIC3.82□□□□□ -1.8
Lima1Q9ERG0 Gm18462-201ENSMUST00000208112 417 ntBASIC3.82□□□□□ -1.8
Lima1Q9ERG0 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC3.82□□□□□ -1.8
Lima1Q9ERG0 AC147615.1-201ENSMUST00000218914 441 ntBASIC3.82□□□□□ -1.8
Lima1Q9ERG0 AC153948.1-201ENSMUST00000219080 3838 ntBASIC3.82□□□□□ -1.8
Lima1Q9ERG0 AC124524.2-201ENSMUST00000223940 588 ntBASIC3.82□□□□□ -1.8
Lima1Q9ERG0 Olfr629-201ENSMUST00000051346 1122 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Lima1Q9ERG0 Tmem69-201ENSMUST00000069674 974 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
Lima1Q9ERG0 Gm156-201ENSMUST00000095409 682 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Lima1Q9ERG0 Gm45176-201ENSMUST00000207696 4096 ntBASIC3.81□□□□□ -1.8
Lima1Q9ERG0 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Lima1Q9ERG0 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC3.81□□□□□ -1.8
Lima1Q9ERG0 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Lima1Q9ERG0 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Lima1Q9ERG0 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Lima1Q9ERG0 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Lima1Q9ERG0 2310057J18Rik-202ENSMUST00000140558 1445 ntTSL 5 BASIC3.81□□□□□ -1.8
Lima1Q9ERG0 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC3.81□□□□□ -1.8
Lima1Q9ERG0 Gm37672-201ENSMUST00000192682 4014 ntBASIC3.81□□□□□ -1.8
Lima1Q9ERG0 AC159188.2-201ENSMUST00000224103 1301 ntBASIC3.81□□□□□ -1.8
Lima1Q9ERG0 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Lima1Q9ERG0 Gm15151-201ENSMUST00000117106 177 ntBASIC3.81□□□□□ -1.8
Lima1Q9ERG0 Gm7618-201ENSMUST00000121643 171 ntBASIC3.81□□□□□ -1.8
Lima1Q9ERG0 Gm9003-201ENSMUST00000121810 482 ntBASIC3.81□□□□□ -1.8
Lima1Q9ERG0 Gm16250-201ENSMUST00000148974 256 ntBASIC3.81□□□□□ -1.8
Lima1Q9ERG0 Gm23905-201ENSMUST00000157568 109 ntBASIC3.81□□□□□ -1.8
Lima1Q9ERG0 Gm22637-201ENSMUST00000158144 283 ntBASIC3.81□□□□□ -1.8
Lima1Q9ERG0 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC3.81□□□□□ -1.8
Lima1Q9ERG0 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC3.81□□□□□ -1.8
Lima1Q9ERG0 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Lima1Q9ERG0 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Lima1Q9ERG0 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Lima1Q9ERG0 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC3.81□□□□□ -1.8
Lima1Q9ERG0 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC3.81□□□□□ -1.8
Lima1Q9ERG0 Gm27695-201ENSMUST00000184301 91 ntBASIC3.81□□□□□ -1.8
Lima1Q9ERG0 1700109I08Rik-201ENSMUST00000185680 396 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Lima1Q9ERG0 Gm8600-201ENSMUST00000186320 905 ntBASIC3.81□□□□□ -1.8
Lima1Q9ERG0 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Lima1Q9ERG0 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC3.81□□□□□ -1.8
Lima1Q9ERG0 Gm28997-201ENSMUST00000188759 429 ntBASIC3.81□□□□□ -1.8
Lima1Q9ERG0 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC3.81□□□□□ -1.8
Lima1Q9ERG0 8030487O14Rik-201ENSMUST00000200244 903 ntBASIC3.81□□□□□ -1.8
Lima1Q9ERG0 Gm8035-201ENSMUST00000204625 687 ntBASIC3.81□□□□□ -1.8
Lima1Q9ERG0 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Lima1Q9ERG0 Gm45434-201ENSMUST00000210550 293 ntBASIC3.81□□□□□ -1.8
Lima1Q9ERG0 Gm9655-201ENSMUST00000211321 1284 ntBASIC3.81□□□□□ -1.8
Lima1Q9ERG0 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC3.81□□□□□ -1.8
Lima1Q9ERG0 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Lima1Q9ERG0 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC3.81□□□□□ -1.8
Lima1Q9ERG0 CT030662.3-201ENSMUST00000228751 476 ntBASIC3.81□□□□□ -1.8
Lima1Q9ERG0 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Lima1Q9ERG0 Olfr1507-201ENSMUST00000073571 1112 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Lima1Q9ERG0 Olfr1205-201ENSMUST00000076438 924 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Lima1Q9ERG0 Olfr798-201ENSMUST00000079810 936 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Lima1Q9ERG0 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Lima1Q9ERG0 Gm37887-201ENSMUST00000192752 2716 ntBASIC3.81□□□□□ -1.8
Lima1Q9ERG0 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Lima1Q9ERG0 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Lima1Q9ERG0 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Lima1Q9ERG0 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Lima1Q9ERG0 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Lima1Q9ERG0 Gm43829-201ENSMUST00000196191 3802 ntBASIC3.8□□□□□ -1.8
Lima1Q9ERG0 Mndal-204ENSMUST00000188804 2026 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Lima1Q9ERG0 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Lima1Q9ERG0 Gm12667-201ENSMUST00000118299 1332 ntBASIC3.8□□□□□ -1.8
Lima1Q9ERG0 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC3.8□□□□□ -1.8
Lima1Q9ERG0 Mir92b-201ENSMUST00000102300 83 ntBASIC3.8□□□□□ -1.8
Lima1Q9ERG0 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Lima1Q9ERG0 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Lima1Q9ERG0 Gm16082-201ENSMUST00000115992 377 ntBASIC3.8□□□□□ -1.8
Lima1Q9ERG0 Gm13314-201ENSMUST00000118742 335 ntBASIC3.8□□□□□ -1.8
Lima1Q9ERG0 Gm12994-201ENSMUST00000119601 447 ntBASIC3.8□□□□□ -1.8
Lima1Q9ERG0 Gm11234-201ENSMUST00000141030 845 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Lima1Q9ERG0 Gm25271-201ENSMUST00000157273 290 ntBASIC3.8□□□□□ -1.8
Lima1Q9ERG0 Gm22519-201ENSMUST00000158270 178 ntBASIC3.8□□□□□ -1.8
Lima1Q9ERG0 Gm23198-201ENSMUST00000158811 91 ntBASIC3.8□□□□□ -1.8
Lima1Q9ERG0 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Lima1Q9ERG0 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Lima1Q9ERG0 Gm27611-201ENSMUST00000184690 108 ntBASIC3.8□□□□□ -1.8
Lima1Q9ERG0 Gm29334-201ENSMUST00000190334 357 ntBASIC3.8□□□□□ -1.8
Lima1Q9ERG0 Gm28267-201ENSMUST00000191093 265 ntBASIC3.8□□□□□ -1.8
Lima1Q9ERG0 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC3.8□□□□□ -1.8
Lima1Q9ERG0 Mir1892-201ENSMUST00000197752 80 ntBASIC3.8□□□□□ -1.8
Lima1Q9ERG0 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC3.8□□□□□ -1.8
Lima1Q9ERG0 Gm42526-201ENSMUST00000198956 393 ntBASIC3.8□□□□□ -1.8
Lima1Q9ERG0 Gm17780-201ENSMUST00000207142 612 ntBASIC3.8□□□□□ -1.8
Lima1Q9ERG0 Gm18944-201ENSMUST00000207672 643 ntBASIC3.8□□□□□ -1.8
Lima1Q9ERG0 Gm29774-201ENSMUST00000219270 436 ntBASIC3.8□□□□□ -1.8
Lima1Q9ERG0 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
Lima1Q9ERG0 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Lima1Q9ERG0 Snord22-201ENSMUST00000083153 126 ntBASIC3.8□□□□□ -1.8
Lima1Q9ERG0 Olfr143-201ENSMUST00000093865 942 ntAPPRIS P2 BASIC3.8□□□□□ -1.8
Lima1Q9ERG0 Olfr1037-201ENSMUST00000099911 1125 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Lima1Q9ERG0 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms